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The map label for this gene is tsr [H]

Identifier: 21242415

GI number: 21242415

Start: 1920416

End: 1922458

Strand: Reverse

Name: tsr [H]

Synonym: XAC1666

Alternate gene names: 21242415

Gene position: 1922458-1920416 (Counterclockwise)

Preceding gene: 77748601

Following gene: 21242413

Centisome position: 37.14

GC content: 64.71

Gene sequence:

>2043_bases
ATGGTGATCCTGACCGTGGTCGGCATCCAACGCGTTCGCAGCATCGACCAGCAGCTCACTGCCATCAATGAAGTCAACAG
CGTCAAGCAGCGCTACGCGATCAACTTCCGCGGCAGTGTCCACGACCGCGCCATCGCGCTGCGCGATGTCGTGCTCATGG
ACGACCCCGCGAACCGCCACGCCGCCGAACAATCGATCGACAAGCTCGCTGCCGATTACGCACGCTCTGCGCAACCGCTC
GACGACATGATCGCCAGCTCGACCGATGCGGAAGAGAAAGACATTCTCCAGCAGATCAAGACCATCGAGCAGCGCACCCT
GCCGCTGATCGCGCAAGTGCGCGCGTTCCGCGATGCGGCCGACAAGGCGCAGGCACAACAGCACCTGCTGCAGCAAGCGC
GCCCGGCCTTCATTGCCTGGCTGGCCAGCATCAACGCCTTCATCGATCTGCAGGAAGCCAAGAACCGCCAAGCCGCCAGG
CAGGCCGTTGCCACCGCGCGCGGCTTTGCGATGCTGATGGTGATGTCCACCGTGGTCGCCCTGCTGCTGGGCGCCGCCAT
CGCGTTCCTGCTCACGCGCAGTGTGGTGCTGCCGCTACGCCAGTCGCTGCGCCTGGCCCAGCGCATCAACGACGGCGACC
TGCGCAGCCAGGACGCAGCGACCGGCAACGACGAATCCGGGCAACTGCTGCGCGCCATGCAGCAGATGCAGCGGCGCCTG
CAGGAAGTGATCTCCGCGCAACGCAGCATGGCTGCGCGCCACGACGCCGGCGAGATCAGCTACCGCACCGACGCACGGCG
TTTCCCCGGCGAATATGGCGACATGGTGCAAGACACCAACGCGCTCGTGCACGCCCACGTGCAGACCCAATTGCGCATGA
CCGAGGTCATGGGCAGCTACGCGGTTGGCGATCTTGCCCAGGACATCGAGCAGTATCCCGGCGAAAAATCCGCCATCACT
GCCACCATGCAGCAGGTCAAGCGCAACCTGCAGGCGATCAACGCGCAGATCCAGGAACTGACCCAGGCCGCCTGCGCAGG
CGACTTCGCGCTACGCGGCCAGCCGGAGAAGTTCGAGCACGACTTCCGCCTGATGGTGGAAAACCTCAACACCATGATGG
CCACCTCCGATACCAACCTGGCCAACTTCTCCGGGCTGCTGCGCGCGATCGCCGATGGCGACCTGACCGTGCGCATGTCC
GGCAATTTCCACGGCGTGTTCGCCTCCATGCGCGACGACGCCAACAGCACCGTGCACCGCCTCACCGACATCGTCACCCG
CATCCAGACAACCTCCAACAGCATCGGCTTCGCCGCAGAAGATATCGCCAGCGGCAATCAGGAGCTGGCGCAGCGCAGCG
AACAACAAGCCGCCAGCCTCGAAGAAACCGCCGCCTCGATGGAAGAGCTGACCTCCACCGTCAAGCAGAATGCCGAGCAC
GCCGCCCGCGCCAACCAGCTCGCACGCGGCGCCGCCGCGATCGCCACGGAAGGCCGCGACGTGGTCGGCCAGGTCATCGA
ACAGATGTCCGGCATCGAAGCCGCTTCCAGGCGCATCGCCGACATCATTTCGGTCATCGACGGCATCGCCTTCCAGACCA
ATATCCTGGCCCTCAACGCCGCGGTGGAGGCCGCACGCGCAGGCGAACAAGGCCGCGGCTTCGCCGTTGTCGCATCGGAA
GTGCGCACGCTCTCGCACCGCTCCTCGGATGCAGCAAAAGAAATCAAGCGGCTCATCGACGACTCCGTACAACGCGTCGC
CGACGGCTCCACACTCGTGCACAAGGCCGGCACCACCATGGGCGAAGTCGTCACCAGCGTCCAACACGTCACCGACATCA
TGGCCCACATCTCCGCCGCCTCGAACGAACAAGCCGGCGGTATCGAACAGGTCAATCACACCATCGCGCAGATGGACGAG
ACCACCCAACACAACGTGCGCCTGGTCGAAGCCGCCAGCACCGCCGCGCATGCGTTGGAGCAGCATTCCACGCAACTCAC
CCGCGCAGTGGACGTCTTCAAGGTCAACGCAACGGTGCTGTGA

Upstream 100 bases:

>100_bases
TTCCGCCAGTCGGAACACCGATCGAACCCCTATGCATTTCTTCCCGAATCTGCGCATTGGACAGCGCCTGGCCCTGGGCT
TTCTCGCGATCATCGTCTTG

Downstream 100 bases:

>100_bases
GCCCGCGCGATCGCGTTCGATAGACAAGCGACGGTCGCGGCGATCGTCTGGGCCTCGACTTACCGCAGGCGCCTACTCGG
CGGAAAACAGACCAACCTGC

Product: chemotaxis protein

Products: NA

Alternate protein names: MCP-II; Aspartate chemoreceptor protein [H]

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MVILTVVGIQRVRSIDQQLTAINEVNSVKQRYAINFRGSVHDRAIALRDVVLMDDPANRHAAEQSIDKLAADYARSAQPL
DDMIASSTDAEEKDILQQIKTIEQRTLPLIAQVRAFRDAADKAQAQQHLLQQARPAFIAWLASINAFIDLQEAKNRQAAR
QAVATARGFAMLMVMSTVVALLLGAAIAFLLTRSVVLPLRQSLRLAQRINDGDLRSQDAATGNDESGQLLRAMQQMQRRL
QEVISAQRSMAARHDAGEISYRTDARRFPGEYGDMVQDTNALVHAHVQTQLRMTEVMGSYAVGDLAQDIEQYPGEKSAIT
ATMQQVKRNLQAINAQIQELTQAACAGDFALRGQPEKFEHDFRLMVENLNTMMATSDTNLANFSGLLRAIADGDLTVRMS
GNFHGVFASMRDDANSTVHRLTDIVTRIQTTSNSIGFAAEDIASGNQELAQRSEQQAASLEETAASMEELTSTVKQNAEH
AARANQLARGAAAIATEGRDVVGQVIEQMSGIEAASRRIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASE
VRTLSHRSSDAAKEIKRLIDDSVQRVADGSTLVHKAGTTMGEVVTSVQHVTDIMAHISAASNEQAGGIEQVNHTIAQMDE
TTQHNVRLVEAASTAAHALEQHSTQLTRAVDVFKVNATVL

Sequences:

>Translated_680_residues
MVILTVVGIQRVRSIDQQLTAINEVNSVKQRYAINFRGSVHDRAIALRDVVLMDDPANRHAAEQSIDKLAADYARSAQPL
DDMIASSTDAEEKDILQQIKTIEQRTLPLIAQVRAFRDAADKAQAQQHLLQQARPAFIAWLASINAFIDLQEAKNRQAAR
QAVATARGFAMLMVMSTVVALLLGAAIAFLLTRSVVLPLRQSLRLAQRINDGDLRSQDAATGNDESGQLLRAMQQMQRRL
QEVISAQRSMAARHDAGEISYRTDARRFPGEYGDMVQDTNALVHAHVQTQLRMTEVMGSYAVGDLAQDIEQYPGEKSAIT
ATMQQVKRNLQAINAQIQELTQAACAGDFALRGQPEKFEHDFRLMVENLNTMMATSDTNLANFSGLLRAIADGDLTVRMS
GNFHGVFASMRDDANSTVHRLTDIVTRIQTTSNSIGFAAEDIASGNQELAQRSEQQAASLEETAASMEELTSTVKQNAEH
AARANQLARGAAAIATEGRDVVGQVIEQMSGIEAASRRIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASE
VRTLSHRSSDAAKEIKRLIDDSVQRVADGSTLVHKAGTTMGEVVTSVQHVTDIMAHISAASNEQAGGIEQVNHTIAQMDE
TTQHNVRLVEAASTAAHALEQHSTQLTRAVDVFKVNATVL
>Mature_680_residues
MVILTVVGIQRVRSIDQQLTAINEVNSVKQRYAINFRGSVHDRAIALRDVVLMDDPANRHAAEQSIDKLAADYARSAQPL
DDMIASSTDAEEKDILQQIKTIEQRTLPLIAQVRAFRDAADKAQAQQHLLQQARPAFIAWLASINAFIDLQEAKNRQAAR
QAVATARGFAMLMVMSTVVALLLGAAIAFLLTRSVVLPLRQSLRLAQRINDGDLRSQDAATGNDESGQLLRAMQQMQRRL
QEVISAQRSMAARHDAGEISYRTDARRFPGEYGDMVQDTNALVHAHVQTQLRMTEVMGSYAVGDLAQDIEQYPGEKSAIT
ATMQQVKRNLQAINAQIQELTQAACAGDFALRGQPEKFEHDFRLMVENLNTMMATSDTNLANFSGLLRAIADGDLTVRMS
GNFHGVFASMRDDANSTVHRLTDIVTRIQTTSNSIGFAAEDIASGNQELAQRSEQQAASLEETAASMEELTSTVKQNAEH
AARANQLARGAAAIATEGRDVVGQVIEQMSGIEAASRRIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASE
VRTLSHRSSDAAKEIKRLIDDSVQRVADGSTLVHKAGTTMGEVVTSVQHVTDIMAHISAASNEQAGGIEQVNHTIAQMDE
TTQHNVRLVEAASTAAHALEQHSTQLTRAVDVFKVNATVL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=308, Percent_Identity=53.5714285714286, Blast_Score=269, Evalue=5e-73,
Organism=Escherichia coli, GI2367378, Length=411, Percent_Identity=44.0389294403893, Blast_Score=265, Evalue=1e-71,
Organism=Escherichia coli, GI1787690, Length=290, Percent_Identity=48.9655172413793, Blast_Score=244, Evalue=2e-65,
Organism=Escherichia coli, GI1788194, Length=270, Percent_Identity=51.8518518518518, Blast_Score=241, Evalue=1e-64,
Organism=Escherichia coli, GI1789453, Length=250, Percent_Identity=40.4, Blast_Score=180, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 73823; Mature: 73823

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILTVVGIQRVRSIDQQLTAINEVNSVKQRYAINFRGSVHDRAIALRDVVLMDDPANRH
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHEEEECCCCCHH
AAEQSIDKLAADYARSAQPLDDMIASSTDAEEKDILQQIKTIEQRTLPLIAQVRAFRDAA
HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKAQAQQHLLQQARPAFIAWLASINAFIDLQEAKNRQAARQAVATARGFAMLMVMSTVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLGAAIAFLLTRSVVLPLRQSLRLAQRINDGDLRSQDAATGNDESGQLLRAMQQMQRRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QEVISAQRSMAARHDAGEISYRTDARRFPGEYGDMVQDTNALVHAHVQTQLRMTEVMGSY
HHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGDLAQDIEQYPGEKSAITATMQQVKRNLQAINAQIQELTQAACAGDFALRGQPEKFEH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHH
DFRLMVENLNTMMATSDTNLANFSGLLRAIADGDLTVRMSGNFHGVFASMRDDANSTVHR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHCCHHHHHHH
LTDIVTRIQTTSNSIGFAAEDIASGNQELAQRSEQQAASLEETAASMEELTSTVKQNAEH
HHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARANQLARGAAAIATEGRDVVGQVIEQMSGIEAASRRIADIISVIDGIAFQTNILALNA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
AVEAARAGEQGRGFAVVASEVRTLSHRSSDAAKEIKRLIDDSVQRVADGSTLVHKAGTTM
HHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHH
GEVVTSVQHVTDIMAHISAASNEQAGGIEQVNHTIAQMDETTQHNVRLVEAASTAAHALE
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHH
QHSTQLTRAVDVFKVNATVL
HHHHHHHHHHHHHEECCCCC
>Mature Secondary Structure
MVILTVVGIQRVRSIDQQLTAINEVNSVKQRYAINFRGSVHDRAIALRDVVLMDDPANRH
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHEEEECCCCCHH
AAEQSIDKLAADYARSAQPLDDMIASSTDAEEKDILQQIKTIEQRTLPLIAQVRAFRDAA
HHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKAQAQQHLLQQARPAFIAWLASINAFIDLQEAKNRQAARQAVATARGFAMLMVMSTVVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLGAAIAFLLTRSVVLPLRQSLRLAQRINDGDLRSQDAATGNDESGQLLRAMQQMQRRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QEVISAQRSMAARHDAGEISYRTDARRFPGEYGDMVQDTNALVHAHVQTQLRMTEVMGSY
HHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGDLAQDIEQYPGEKSAITATMQQVKRNLQAINAQIQELTQAACAGDFALRGQPEKFEH
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHH
DFRLMVENLNTMMATSDTNLANFSGLLRAIADGDLTVRMSGNFHGVFASMRDDANSTVHR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHCCHHHHHHH
LTDIVTRIQTTSNSIGFAAEDIASGNQELAQRSEQQAASLEETAASMEELTSTVKQNAEH
HHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AARANQLARGAAAIATEGRDVVGQVIEQMSGIEAASRRIADIISVIDGIAFQTNILALNA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
AVEAARAGEQGRGFAVVASEVRTLSHRSSDAAKEIKRLIDDSVQRVADGSTLVHKAGTTM
HHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHH
GEVVTSVQHVTDIMAHISAASNEQAGGIEQVNHTIAQMDETTQHNVRLVEAASTAAHALE
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHH
QHSTQLTRAVDVFKVNATVL
HHHHHHHHHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6305515; 9097040; 9278503; 9315712 [H]