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The map label for this gene is nodI [H]

Identifier: 21242298

GI number: 21242298

Start: 1788553

End: 1789428

Strand: Reverse

Name: nodI [H]

Synonym: XAC1547

Alternate gene names: 21242298

Gene position: 1789428-1788553 (Counterclockwise)

Preceding gene: 21242299

Following gene: 21242297

Centisome position: 34.57

GC content: 63.13

Gene sequence:

>876_bases
ATGACCGCCGTCTCCTCCGACCATGTGGTCGATGCACGTGGCCTGCGCAAGGCCTACAAGCATCGGCTCGCGCTGGACAA
CACCAGCTTCACCATCGCCGCTGGCCGCATCATTGGATTGATCGGCCCCAACGGCGCCGGCAAGACCACTGCGCTCAAGG
CGGTGCTGGGCCTGACCGATTTCGCCGGCGAGTTGCAGGTGTTGGGCATGGATCCGCGCACGCAGCGCAACGCGCTGATG
AACGAGGTCTGCTTCATTGCCGATGTGGCGGTGCTGCCGCGCTGGCTGCGGGTCGGCGAAGCGATCGATTTCGTCGCCGG
CGTGCATCCGCGTTTCGATCGCGCCAAGTGCGAGCGCTTCCTGGCCAATACCCAGCTCAACCGCAAATCGCGGGTGCGCG
AGTTGTCCAAGGGCATGATCGTGCAGCTGCATCTGGCGCTGGTGATGGCCATCGACGCACGCATCCTGGTGCTGGACGAA
CCGACCCTGGGCCTGGACATCCTCTACCGCAAGCAGTTCTACCAGCGCCTGCTGGAGGATTACTTCGACGAGCAGAAGAC
CATCATCGTCACCACCCACCAGGTCGAGGAGATCGAACACATCCTCACCGATGTGATGTTCATCCGCGACGGCCGCATCG
TGCTCACCGCCGATATGGAAAGCGTCTCCGAGCGCTACACCGAAGTCCTGGTCGGTGCCGATCAGCTGGATGCAGCACGC
GCGCTGAAGCCGATCGACGAGCGCGGACTGCCGTTCGGCAAGACCGTGATGTTGTTCGATGGCGCGCCGAAAGAGCAGCT
CGCCCGTTTTGGCGAAACCCGCAATCCCGGCCTAGCCGACCTGTTCGTTGCGGTCATGAAGGGGACCTACGCATGA

Upstream 100 bases:

>100_bases
AACGCGAGCGTTTCTTGAATGAAGAATGGCCCGCCGTGCTGGAAAGGATCCAGCGCCTGGGACTGTCCATCGACGATCTG
TTGCCACAGGGAAAAACACC

Downstream 100 bases:

>100_bases
ATGCAGTGACCAACAAAGCATCACCCGCACGCACCTTCGCCTGGCTGCTCAAACGCGAATATTGGGAGCACCGTGGCGGC
TTCGTGTGGGCGCAGTTCAT

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTAVSSDHVVDARGLRKAYKHRLALDNTSFTIAAGRIIGLIGPNGAGKTTALKAVLGLTDFAGELQVLGMDPRTQRNALM
NEVCFIADVAVLPRWLRVGEAIDFVAGVHPRFDRAKCERFLANTQLNRKSRVRELSKGMIVQLHLALVMAIDARILVLDE
PTLGLDILYRKQFYQRLLEDYFDEQKTIIVTTHQVEEIEHILTDVMFIRDGRIVLTADMESVSERYTEVLVGADQLDAAR
ALKPIDERGLPFGKTVMLFDGAPKEQLARFGETRNPGLADLFVAVMKGTYA

Sequences:

>Translated_291_residues
MTAVSSDHVVDARGLRKAYKHRLALDNTSFTIAAGRIIGLIGPNGAGKTTALKAVLGLTDFAGELQVLGMDPRTQRNALM
NEVCFIADVAVLPRWLRVGEAIDFVAGVHPRFDRAKCERFLANTQLNRKSRVRELSKGMIVQLHLALVMAIDARILVLDE
PTLGLDILYRKQFYQRLLEDYFDEQKTIIVTTHQVEEIEHILTDVMFIRDGRIVLTADMESVSERYTEVLVGADQLDAAR
ALKPIDERGLPFGKTVMLFDGAPKEQLARFGETRNPGLADLFVAVMKGTYA
>Mature_290_residues
TAVSSDHVVDARGLRKAYKHRLALDNTSFTIAAGRIIGLIGPNGAGKTTALKAVLGLTDFAGELQVLGMDPRTQRNALMN
EVCFIADVAVLPRWLRVGEAIDFVAGVHPRFDRAKCERFLANTQLNRKSRVRELSKGMIVQLHLALVMAIDARILVLDEP
TLGLDILYRKQFYQRLLEDYFDEQKTIIVTTHQVEEIEHILTDVMFIRDGRIVLTADMESVSERYTEVLVGADQLDAARA
LKPIDERGLPFGKTVMLFDGAPKEQLARFGETRNPGLADLFVAVMKGTYA

Specific function: Unknown

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27881501, Length=210, Percent_Identity=29.0476190476191, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI30795238, Length=210, Percent_Identity=29.0476190476191, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI21536376, Length=214, Percent_Identity=28.9719626168224, Blast_Score=85, Evalue=9e-17,
Organism=Homo sapiens, GI27436953, Length=200, Percent_Identity=26.5, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI105990541, Length=202, Percent_Identity=30.1980198019802, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI150417984, Length=217, Percent_Identity=29.9539170506912, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI45446740, Length=213, Percent_Identity=27.6995305164319, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI47078218, Length=213, Percent_Identity=27.6995305164319, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI6005701, Length=243, Percent_Identity=27.1604938271605, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI153792144, Length=216, Percent_Identity=25, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI31657092, Length=201, Percent_Identity=27.8606965174129, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI116734710, Length=222, Percent_Identity=26.5765765765766, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI87081782, Length=205, Percent_Identity=31.7073170731707, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI2367384, Length=236, Percent_Identity=31.3559322033898, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786319, Length=219, Percent_Identity=30.5936073059361, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790190, Length=233, Percent_Identity=26.1802575107296, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI48994943, Length=207, Percent_Identity=31.8840579710145, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788761, Length=215, Percent_Identity=29.7674418604651, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1789963, Length=235, Percent_Identity=25.1063829787234, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787029, Length=215, Percent_Identity=25.5813953488372, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789593, Length=215, Percent_Identity=28.3720930232558, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786563, Length=202, Percent_Identity=25.7425742574257, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87081709, Length=220, Percent_Identity=26.8181818181818, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1789991, Length=234, Percent_Identity=25.6410256410256, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1790739, Length=222, Percent_Identity=24.7747747747748, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788897, Length=242, Percent_Identity=25.2066115702479, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788472, Length=243, Percent_Identity=23.0452674897119, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=202, Percent_Identity=29.7029702970297, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71983516, Length=209, Percent_Identity=25.8373205741627, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=209, Percent_Identity=25.8373205741627, Blast_Score=64, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=209, Percent_Identity=25.8373205741627, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24650853, Length=218, Percent_Identity=31.1926605504587, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281362751, Length=218, Percent_Identity=31.1926605504587, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24650855, Length=218, Percent_Identity=31.1926605504587, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24666092, Length=210, Percent_Identity=29.5238095238095, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28574744, Length=224, Percent_Identity=30.3571428571429, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28574150, Length=220, Percent_Identity=25.4545454545455, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI116007328, Length=220, Percent_Identity=25.4545454545455, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24582014, Length=196, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24582012, Length=196, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 32410; Mature: 32279

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVSSDHVVDARGLRKAYKHRLALDNTSFTIAAGRIIGLIGPNGAGKTTALKAVLGLTD
CCCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHHHH
FAGELQVLGMDPRTQRNALMNEVCFIADVAVLPRWLRVGEAIDFVAGVHPRFDRAKCERF
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LANTQLNRKSRVRELSKGMIVQLHLALVMAIDARILVLDEPTLGLDILYRKQFYQRLLED
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHH
YFDEQKTIIVTTHQVEEIEHILTDVMFIRDGRIVLTADMESVSERYTEVLVGADQLDAAR
HHCCCCEEEEEEHHHHHHHHHHHHHHHEECCCEEEEECHHHHHHHHHHHHHCCCHHHHHH
ALKPIDERGLPFGKTVMLFDGAPKEQLARFGETRNPGLADLFVAVMKGTYA
HHCCHHHCCCCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TAVSSDHVVDARGLRKAYKHRLALDNTSFTIAAGRIIGLIGPNGAGKTTALKAVLGLTD
CCCCCCCEECHHHHHHHHHHHHHCCCCCEEEEECEEEEEECCCCCCHHHHHHHHHHHHH
FAGELQVLGMDPRTQRNALMNEVCFIADVAVLPRWLRVGEAIDFVAGVHPRFDRAKCERF
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LANTQLNRKSRVRELSKGMIVQLHLALVMAIDARILVLDEPTLGLDILYRKQFYQRLLED
HHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHH
YFDEQKTIIVTTHQVEEIEHILTDVMFIRDGRIVLTADMESVSERYTEVLVGADQLDAAR
HHCCCCEEEEEEHHHHHHHHHHHHHHHEECCCEEEEECHHHHHHHHHHHHHCCCHHHHHH
ALKPIDERGLPFGKTVMLFDGAPKEQLARFGETRNPGLADLFVAVMKGTYA
HHCCHHHCCCCCCCEEEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]