Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 21242270

GI number: 21242270

Start: 1751643

End: 1753307

Strand: Reverse

Name: recN [H]

Synonym: XAC1519

Alternate gene names: 21242270

Gene position: 1753307-1751643 (Counterclockwise)

Preceding gene: 21242277

Following gene: 21242267

Centisome position: 33.88

GC content: 69.97

Gene sequence:

>1665_bases
ATGCTCAGACACCTCTCGATCAAGGATTTCGCCGTTGTCCGTGCCACCGAACTGGAATTCGGGCCGGGAATGACCGTGGT
CTCGGGCGAAACCGGCGCCGGCAAGTCGCTGATGGTCGACGCGCTGGGCTTTCTGTCCGGCCTGCGCGCCGACAGCGGCG
TGGTCCGTCATGGCGCCGAGCGCGCCGAACTGTCGGCCGAATTCCAGCTGCCAGCCGAGCATCCCGGGCTGCGCTGGCTG
GCCGACAACGAACTCGACGACGAGGCGCAATGCCAGCTGCGCCGGATCATCCGCGCCGACGGCGGCTCGCGCGCGTGGAT
CAACGGCCGTCCGGTCACCTCCTCGCAACTGGCGGAACTGGCCTCGAAGCTGGTCGAAATTCACGGCCAGCACGAGCACC
AGGCGCTGATGGCCCGGCACAGCCAGCTCGCACTGCTCGATGCCTACGCCCGCAACAGCGCACAGCGCGAGCAGGTGCGC
CAGGCCAGCCAACGCTGGCAGGCGCTACTGGACGAGCGCGACGCCCTCTCCGCGCAGGGCGATGTCTCCGACCGGATCGG
CTTTCTGGAACACCAACTGGCCGAACTGGAACGCGAGGACCTTGACCCGGCCGCGATTGCCGCACTGGACGTCAATCACC
GCCGCCAGGCCCATGCCACCGCGTTGATCGGCGCCTGCGACAGCGTCGCCCAGCAGCTCAACGGCGACGACGGCGCCAGC
GCCCTGGGCCTGTTGCAGGACAGCCGCCACGATTTATCGCGCGTGGCCGAGCACGAACCGCGGCTGGGCGAGGTGGACGC
GCTGCTGGACAGCGCAGTGATCCAGATCGAGGAAGCGCTGGCCCTGCTCGACCGCGTGCGCGACGACCTGGAGGCCGACC
CGGCCCAGTTCGAGGCCATGGAGCGCCGCCTCGGCCGTCTGCACGATCTGGCGCGCAAACACCGCGTCACACCGGACGAG
CTGGCCGCGCATCGCGACCATCTGAGCGCCGAAGTCGAGAGCCTGCGCGGCGCCGACGAGCGCCTGCAGCAGCTCGACAA
GCACATCGAAACCGCCACCGGCGCCTGGCGCAGCGCGGCCGGTGCGCTCAGCGACAGCCGCACTGCCGCTGCCGAGGCGT
TGTCGGCCGCGACCACGGCGCTGATCGGCGAGTTGGGCATGGGTGGCGGGCAGTTCCTGATCCAGCTGCAGCCACACGAG
AGCGCCCGGCCGGACCCCAATGGCGCCGAACGGGTGGAATTCCTGGTCGCCGCCAACGCCGGGCAGCCCCCGCGCGCCTT
GCGCAAGGTTGCCTCCGGTGGCGAGCTGTCGCGCATTTCGCTGGCCATCGAAGTGGCGGCGCTGGGCCTGGACAGCGTGC
CCACCATGGTGTTCGACGAAGTGGATTCGGGCATCGGCGGCGCGGTGGCCGACATCGTCGGGCAGAAGCTGCGCGCGTTG
GGCGAAGAGCGCCAGGTGCTGTGCGTCACCCACCTGCCGCAGGTCGCCGCCAAGGGCCATGCGCATTACCGGGTCAGCAA
GGCGCCGGTGGACGGCATGACCCAGAGCGCGGTCGAACTGCTCGGCCCGCAGACCCGCCAGGAAGAATTGGCACGCATGC
TGGGTGGTGTGGAAGTGAGCAAGGAAGCGCGCGCGGCCGCCCGCAAGCTGCTGCAGAGCGCCTGA

Upstream 100 bases:

>100_bases
ACAGCGCATAGATAATGTCTGGCCCCGGGGATGGCAAGCATCCGATTCCCCGTTTGCCCCTGCCACCCTAAGCTTCCCCA
AAGCGTTCACACTCGACCTC

Downstream 100 bases:

>100_bases
GCGGGCGAGTCGGCCGCAAATTCAGACTCCCCCGTTCCTCCGCCGTCTGACAAGGCTCCCTTCCCCCGCCTGCGGGGGAA
GGTGCCCGAAGGGCGGATGG

Product: recombination protein N

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAERAELSAEFQLPAEHPGLRWL
ADNELDDEAQCQLRRIIRADGGSRAWINGRPVTSSQLAELASKLVEIHGQHEHQALMARHSQLALLDAYARNSAQREQVR
QASQRWQALLDERDALSAQGDVSDRIGFLEHQLAELEREDLDPAAIAALDVNHRRQAHATALIGACDSVAQQLNGDDGAS
ALGLLQDSRHDLSRVAEHEPRLGEVDALLDSAVIQIEEALALLDRVRDDLEADPAQFEAMERRLGRLHDLARKHRVTPDE
LAAHRDHLSAEVESLRGADERLQQLDKHIETATGAWRSAAGALSDSRTAAAEALSAATTALIGELGMGGGQFLIQLQPHE
SARPDPNGAERVEFLVAANAGQPPRALRKVASGGELSRISLAIEVAALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRAL
GEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQSAVELLGPQTRQEELARMLGGVEVSKEARAAARKLLQSA

Sequences:

>Translated_554_residues
MLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAERAELSAEFQLPAEHPGLRWL
ADNELDDEAQCQLRRIIRADGGSRAWINGRPVTSSQLAELASKLVEIHGQHEHQALMARHSQLALLDAYARNSAQREQVR
QASQRWQALLDERDALSAQGDVSDRIGFLEHQLAELEREDLDPAAIAALDVNHRRQAHATALIGACDSVAQQLNGDDGAS
ALGLLQDSRHDLSRVAEHEPRLGEVDALLDSAVIQIEEALALLDRVRDDLEADPAQFEAMERRLGRLHDLARKHRVTPDE
LAAHRDHLSAEVESLRGADERLQQLDKHIETATGAWRSAAGALSDSRTAAAEALSAATTALIGELGMGGGQFLIQLQPHE
SARPDPNGAERVEFLVAANAGQPPRALRKVASGGELSRISLAIEVAALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRAL
GEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQSAVELLGPQTRQEELARMLGGVEVSKEARAAARKLLQSA
>Mature_554_residues
MLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAERAELSAEFQLPAEHPGLRWL
ADNELDDEAQCQLRRIIRADGGSRAWINGRPVTSSQLAELASKLVEIHGQHEHQALMARHSQLALLDAYARNSAQREQVR
QASQRWQALLDERDALSAQGDVSDRIGFLEHQLAELEREDLDPAAIAALDVNHRRQAHATALIGACDSVAQQLNGDDGAS
ALGLLQDSRHDLSRVAEHEPRLGEVDALLDSAVIQIEEALALLDRVRDDLEADPAQFEAMERRLGRLHDLARKHRVTPDE
LAAHRDHLSAEVESLRGADERLQQLDKHIETATGAWRSAAGALSDSRTAAAEALSAATTALIGELGMGGGQFLIQLQPHE
SARPDPNGAERVEFLVAANAGQPPRALRKVASGGELSRISLAIEVAALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRAL
GEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQSAVELLGPQTRQEELARMLGGVEVSKEARAAARKLLQSA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=553, Percent_Identity=39.7830018083183, Blast_Score=351, Evalue=7e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59541; Mature: 59541

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAE
CCCCCCCCHHHEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCH
RAELSAEFQLPAEHPGLRWLADNELDDEAQCQLRRIIRADGGSRAWINGRPVTSSQLAEL
HHHCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
ASKLVEIHGQHEHQALMARHSQLALLDAYARNSAQREQVRQASQRWQALLDERDALSAQG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVSDRIGFLEHQLAELEREDLDPAAIAALDVNHRRQAHATALIGACDSVAQQLNGDDGAS
CHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ALGLLQDSRHDLSRVAEHEPRLGEVDALLDSAVIQIEEALALLDRVRDDLEADPAQFEAM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ERRLGRLHDLARKHRVTPDELAAHRDHLSAEVESLRGADERLQQLDKHIETATGAWRSAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GALSDSRTAAAEALSAATTALIGELGMGGGQFLIQLQPHESARPDPNGAERVEFLVAANA
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHEEEEEECCC
GQPPRALRKVASGGELSRISLAIEVAALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRAL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHC
GEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQSAVELLGPQTRQEELARMLGGVEVS
CCCCCEEEEHHCHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCC
KEARAAARKLLQSA
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLRHLSIKDFAVVRATELEFGPGMTVVSGETGAGKSLMVDALGFLSGLRADSGVVRHGAE
CCCCCCCCHHHEEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCH
RAELSAEFQLPAEHPGLRWLADNELDDEAQCQLRRIIRADGGSRAWINGRPVTSSQLAEL
HHHCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH
ASKLVEIHGQHEHQALMARHSQLALLDAYARNSAQREQVRQASQRWQALLDERDALSAQG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DVSDRIGFLEHQLAELEREDLDPAAIAALDVNHRRQAHATALIGACDSVAQQLNGDDGAS
CHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH
ALGLLQDSRHDLSRVAEHEPRLGEVDALLDSAVIQIEEALALLDRVRDDLEADPAQFEAM
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ERRLGRLHDLARKHRVTPDELAAHRDHLSAEVESLRGADERLQQLDKHIETATGAWRSAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
GALSDSRTAAAEALSAATTALIGELGMGGGQFLIQLQPHESARPDPNGAERVEFLVAANA
HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHEEEEEECCC
GQPPRALRKVASGGELSRISLAIEVAALGLDSVPTMVFDEVDSGIGGAVADIVGQKLRAL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHC
GEERQVLCVTHLPQVAAKGHAHYRVSKAPVDGMTQSAVELLGPQTRQEELARMLGGVEVS
CCCCCEEEEHHCHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCC
KEARAAARKLLQSA
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]