Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242242
Identifier: 21242242
GI number: 21242242
Start: 1721945
End: 1723108
Strand: Reverse
Name: 21242242
Synonym: XAC1490
Alternate gene names: NA
Gene position: 1723108-1721945 (Counterclockwise)
Preceding gene: 21242244
Following gene: 21242240
Centisome position: 33.29
GC content: 62.97
Gene sequence:
>1164_bases TTGGGCGCAGAAGGTCGCGAGCCATCTCGGTACGCGGCATTCCAACAACGCATCAGCGATGAGCAGGCCATGGCCATTCT GCCGGAGATATCGGAGGCGTTTTGCGAACCTTTTGCTGACTCGTCCCAGATTCCGACGCTGCTTGCAGCAGGCTCCGCGC GCCGTCACGTCAGTCACATGCTGACAGGCGATGGAGGCGATGGAGGCGATGGAGGCGATGGAGGCGATGGAGGCGACGAA TTATTCTTCGGCCATGCCGCTTGTGCGCGTGCACTGCGCAATGCGCGCTTGACCTCCATGATCCCGGACACTCTGCGCCG TTTGCTGCGTCGCCGGGGCCTCTACACGAAGGAGTCGGCCCGTTTGGGCGGATGGCGAGCGGCCCTAGGGGAGACGATCA GCCGCTCGGTGGAAGAGAGCTACCTGCTCAGAGTCTCGCATTGGCGAAACCCCCACTGCGCCGTGCTTGGCTCCATGGAG TACCCCACGATCTATGACACACCCATGGATCAGCTGACCGTCGGATCCCCAGGCGAGCGCGTTCTCTCTATGGACATTGC CATGGAACTTGGGGAAGGACTCATGACCAAAACGGCCAAGGCCGGGATTCCCCGATGCAGAGGTCCAGGCTTTGGAGATT GCGAAGGACCGATGCAGACTGCACGCACTGCGTCAGTTAGTGACGCGCGCGGCATGTTCGTGCTCATCGCGACGAACCAG GGCGCCTGCCAAGTCGTCGGCAGTTGCACACCGCGGGGCGGCATCGCCGCGGAGTTGATCGAACAAGGCCAGCAACGCGC TTGCTTCGTGTTGCAGCAACGCCAGTGCGCTTTTATTGGGCTCTTCCATTGCACTTGCTCCAGAAACGCTCGACGGCGCC CTGATCAGACCGGAGCAAATCGCGTGCCAGCCGTCAGACCCTGTCGCTCAGGCGTACTCGCGCTGCTCTTGCGCCTTGGC GTGCATGGCTTCCAGCGTGACCATGCCGGCAATGCGGGCGGCTGCCATGGCGCTACGATGGTCGGGAAAGGTCGACGACA GCGCAGCGGCTGCCAAGTTCGCGCCGCGGCCGATGCCGATCTGCGCGATATCCCAGCCGGCCACCCAGCCATGGGCGGGG GTATCGCCTTTGGCGGCATGACAGGTGAGCTGGTAATTGCCTAG
Upstream 100 bases:
>100_bases CCGATTCCAGCCTCATCACGTCCCTCCTGCAGTCGCAACGCTCAACGCCTGTCGATACCGTGACCATCGGATTTGAGGAT GCCGATCACGACGAAATGCA
Downstream 100 bases:
>100_bases AAAAATGACCAACGGGCGCCCTTTTCGGTGACTGCTTGCCAGCATACCGCCACGACGCTACGGCCGGGGGCGATGTGCCG TCTGCCAGCTGACTCGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: O-Antigen Biosynthesis Aminotransferase
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MGAEGREPSRYAAFQQRISDEQAMAILPEISEAFCEPFADSSQIPTLLAAGSARRHVSHMLTGDGGDGGDGGDGGDGGDE LFFGHAACARALRNARLTSMIPDTLRRLLRRRGLYTKESARLGGWRAALGETISRSVEESYLLRVSHWRNPHCAVLGSME YPTIYDTPMDQLTVGSPGERVLSMDIAMELGEGLMTKTAKAGIPRCRGPGFGDCEGPMQTARTASVSDARGMFVLIATNQ GACQVVGSCTPRGGIAAELIEQGQQRACFVLQQRQCAFIGLFHCTCSRNARRRPDQTGANRVPAVRPCRSGVLALLLRLG VHGFQRDHAGNAGGCHGATMVGKGRRQRSGCQVRAAADADLRDIPAGHPAMGGGIAFGGMTGELVIA
Sequences:
>Translated_387_residues MGAEGREPSRYAAFQQRISDEQAMAILPEISEAFCEPFADSSQIPTLLAAGSARRHVSHMLTGDGGDGGDGGDGGDGGDE LFFGHAACARALRNARLTSMIPDTLRRLLRRRGLYTKESARLGGWRAALGETISRSVEESYLLRVSHWRNPHCAVLGSME YPTIYDTPMDQLTVGSPGERVLSMDIAMELGEGLMTKTAKAGIPRCRGPGFGDCEGPMQTARTASVSDARGMFVLIATNQ GACQVVGSCTPRGGIAAELIEQGQQRACFVLQQRQCAFIGLFHCTCSRNARRRPDQTGANRVPAVRPCRSGVLALLLRLG VHGFQRDHAGNAGGCHGATMVGKGRRQRSGCQVRAAADADLRDIPAGHPAMGGGIAFGGMTGELVIA >Mature_386_residues GAEGREPSRYAAFQQRISDEQAMAILPEISEAFCEPFADSSQIPTLLAAGSARRHVSHMLTGDGGDGGDGGDGGDGGDEL FFGHAACARALRNARLTSMIPDTLRRLLRRRGLYTKESARLGGWRAALGETISRSVEESYLLRVSHWRNPHCAVLGSMEY PTIYDTPMDQLTVGSPGERVLSMDIAMELGEGLMTKTAKAGIPRCRGPGFGDCEGPMQTARTASVSDARGMFVLIATNQG ACQVVGSCTPRGGIAAELIEQGQQRACFVLQQRQCAFIGLFHCTCSRNARRRPDQTGANRVPAVRPCRSGVLALLLRLGV HGFQRDHAGNAGGCHGATMVGKGRRQRSGCQVRAAADADLRDIPAGHPAMGGGIAFGGMTGELVIA
Specific function: Unknown
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41054; Mature: 40923
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAEGREPSRYAAFQQRISDEQAMAILPEISEAFCEPFADSSQIPTLLAAGSARRHVSHM CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHH LTGDGGDGGDGGDGGDGGDELFFGHAACARALRNARLTSMIPDTLRRLLRRRGLYTKESA HCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RLGGWRAALGETISRSVEESYLLRVSHWRNPHCAVLGSMEYPTIYDTPMDQLTVGSPGER CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCHHHEECCCCCCH VLSMDIAMELGEGLMTKTAKAGIPRCRGPGFGDCEGPMQTARTASVSDARGMFVLIATNQ HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCC GACQVVGSCTPRGGIAAELIEQGQQRACFVLQQRQCAFIGLFHCTCSRNARRRPDQTGAN CCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCC RVPAVRPCRSGVLALLLRLGVHGFQRDHAGNAGGCHGATMVGKGRRQRSGCQVRAAADAD CCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECCCC LRDIPAGHPAMGGGIAFGGMTGELVIA HHHCCCCCCCCCCCEEECCCCCEEEEC >Mature Secondary Structure GAEGREPSRYAAFQQRISDEQAMAILPEISEAFCEPFADSSQIPTLLAAGSARRHVSHM CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHH LTGDGGDGGDGGDGGDGGDELFFGHAACARALRNARLTSMIPDTLRRLLRRRGLYTKESA HCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC RLGGWRAALGETISRSVEESYLLRVSHWRNPHCAVLGSMEYPTIYDTPMDQLTVGSPGER CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCHHHEECCCCCCH VLSMDIAMELGEGLMTKTAKAGIPRCRGPGFGDCEGPMQTARTASVSDARGMFVLIATNQ HHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCC GACQVVGSCTPRGGIAAELIEQGQQRACFVLQQRQCAFIGLFHCTCSRNARRRPDQTGAN CCEEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCCC RVPAVRPCRSGVLALLLRLGVHGFQRDHAGNAGGCHGATMVGKGRRQRSGCQVRAAADAD CCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHCCCCCCCCCCEEEEECCCC LRDIPAGHPAMGGGIAFGGMTGELVIA HHHCCCCCCCCCCCEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA