Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242193
Identifier: 21242193
GI number: 21242193
Start: 1661955
End: 1662686
Strand: Reverse
Name: 21242193
Synonym: XAC1440
Alternate gene names: NA
Gene position: 1662686-1661955 (Counterclockwise)
Preceding gene: 21242194
Following gene: 21242192
Centisome position: 32.13
GC content: 68.99
Gene sequence:
>732_bases TTGTTCACCCATGCGGCGCGCGGCGGCGCGGCTGGGATTGCGGTCGCCTCAGGCTGCTGGGGCGCGGCAAAAGGTGGACG GCCTGGAGGTGCAGTAACGGTTGTTCACCCATGCGGCGCGCGGCGGCGCGGCTGGGATTGCGGTCGTCTCAGGCTGCTGG GGCGCGGCAAAAGGTGGACGGCTTGGAGGTGCAGCAAACGGCAATTCACTCGTCCGGCGCGCGGCGGCGCGGCTGGCACT GCGGTCGCCTCAGGCTGCTGGGGCGCGGCAAAAGGTGGACGGCTTGGAGGTGCAGTAACGGTTGTTCACCCATGCGGCGC GCGGCGGCGCGGCTGGGATTGCGGTCGCCTCAGGCTGCTGGGGCGCGGCAAAAGGTGGACGGCCTGGAGGTGCAGTAACG GTTGTTCACCCTTGCGGCGCGCGGCGGCGCGGCTGGCACTGCGGTCGCCTCAGGCTGCTGAGGCGCGGCAAAAGGTGGAC GGCTTGGAGGTGCAGCAAACGGCAATTCACTCGTCCGGCGCGCGGCGGCGCGGCTGGCACTGCGGTCGCCTCAGGCTGCT GGGGCGCGGCAAAAGGTGGACGGCTTGGAGGTGCAGTAACGGTTGTTCACCCATGCGGCGCGCAGCGGCGCGGCTGGGAT TGCGGTCGCCTCAGGCTGCTGGGGCGCCGTCATCGAGCCAGGAGGCTATGTGCAATATTCGGATAACCACGAAGCGAAAT CAGGTGATCTGA
Upstream 100 bases:
>100_bases GTTCAAGGACCTGGACACGTATGTGGGTGCGCGGGCGAGCCGTGGATCGTTGTTGCCGCGTGGGTGGCAAAAGGTGGACG GCCTGGAGGTGCAGTAACGG
Downstream 100 bases:
>100_bases TCCAGATCGACACGCTGTATCGTGGCAAGGTCATCGCGTGCATGGACACAGCCGATTACCTTCCGGGACAGGAAAGCTGG GGATACCTTGGCGAGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MFTHAARGGAAGIAVASGCWGAAKGGRPGGAVTVVHPCGARRRGWDCGRLRLLGRGKRWTAWRCSKRQFTRPARGGAAGT AVASGCWGAAKGGRLGGAVTVVHPCGARRRGWDCGRLRLLGRGKRWTAWRCSNGCSPLRRAAARLALRSPQAAEARQKVD GLEVQQTAIHSSGARRRGWHCGRLRLLGRGKRWTAWRCSNGCSPMRRAAARLGLRSPQAAGAPSSSQEAMCNIRITTKRN QVI
Sequences:
>Translated_243_residues MFTHAARGGAAGIAVASGCWGAAKGGRPGGAVTVVHPCGARRRGWDCGRLRLLGRGKRWTAWRCSKRQFTRPARGGAAGT AVASGCWGAAKGGRLGGAVTVVHPCGARRRGWDCGRLRLLGRGKRWTAWRCSNGCSPLRRAAARLALRSPQAAEARQKVD GLEVQQTAIHSSGARRRGWHCGRLRLLGRGKRWTAWRCSNGCSPMRRAAARLGLRSPQAAGAPSSSQEAMCNIRITTKRN QVI >Mature_243_residues MFTHAARGGAAGIAVASGCWGAAKGGRPGGAVTVVHPCGARRRGWDCGRLRLLGRGKRWTAWRCSKRQFTRPARGGAAGT AVASGCWGAAKGGRLGGAVTVVHPCGARRRGWDCGRLRLLGRGKRWTAWRCSNGCSPLRRAAARLALRSPQAAEARQKVD GLEVQQTAIHSSGARRRGWHCGRLRLLGRGKRWTAWRCSNGCSPMRRAAARLGLRSPQAAGAPSSSQEAMCNIRITTKRN QVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25965; Mature: 25965
Theoretical pI: Translated: 12.53; Mature: 12.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTHAARGGAAGIAVASGCWGAAKGGRPGGAVTVVHPCGARRRGWDCGRLRLLGRGKRWT CCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCE AWRCSKRQFTRPARGGAAGTAVASGCWGAAKGGRLGGAVTVVHPCGARRRGWDCGRLRLL EEECCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEE GRGKRWTAWRCSNGCSPLRRAAARLALRSPQAAEARQKVDGLEVQQTAIHSSGARRRGWH ECCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCC CGRLRLLGRGKRWTAWRCSNGCSPMRRAAARLGLRSPQAAGAPSSSQEAMCNIRITTKRN CCEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCC QVI CCC >Mature Secondary Structure MFTHAARGGAAGIAVASGCWGAAKGGRPGGAVTVVHPCGARRRGWDCGRLRLLGRGKRWT CCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCE AWRCSKRQFTRPARGGAAGTAVASGCWGAAKGGRLGGAVTVVHPCGARRRGWDCGRLRLL EEECCCHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEE GRGKRWTAWRCSNGCSPLRRAAARLALRSPQAAEARQKVDGLEVQQTAIHSSGARRRGWH ECCCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCC CGRLRLLGRGKRWTAWRCSNGCSPMRRAAARLGLRSPQAAGAPSSSQEAMCNIRITTKRN CCEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCC QVI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA