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The map label for this gene is 21241346

Identifier: 21241346

GI number: 21241346

Start: 676549

End: 677550

Strand: Direct

Name: 21241346

Synonym: XAC0575

Alternate gene names: NA

Gene position: 676549-677550 (Clockwise)

Preceding gene: 21241345

Following gene: 21241347

Centisome position: 13.07

GC content: 62.57

Gene sequence:

>1002_bases
ATGACCATTTTTTGCAGGCACTACCACCGTGTATGGCTCATCTTGCTGCTGTCTCTGTGCAGCGCCGGCGTCAGCGCGCA
AGGCATCGCCAAAGGCGCGGACGTCAGCTGGCTCAATCAACAGGCCGCCAACAATCCGCCGCAGGTCTTTCGCGATGCAG
CCGGCAACACCACCGACTTCATCAAGCTGTTCAAGGATGTCGGCGGCAATGCCATTCGCCTGCGCGTGTGGGTCAACCCG
TCCGGCGGCTGGAACGATGGCCGCGACACCCTGGACAAGGCCAAGCGCGCCGCCGCGCAAGGCATGCGCATCATGATCGA
CTTCCATTACAGCGACAGCTGGGCCGACCCCGGCAAGCAGACCAAGCCGGCCGCCTGGGCCGGCCACTCCGTCGCCCAGC
TCAACACCGATGTCTACAGCCACACCCAGGGCATCCTCAAATATCTCAAGGACAACGGCATCACCGTCAGCTGGGTGCAG
GTCGGCAACGAGATCAATAGCGGCATGCTGTGGAACGAGGGCAAGACGCCCAACTTCGCCACCCTGGGCCAGTTCATCAA
CAGCGGATACAACGCCACCAAGGCGGTGTATCCCAACGCCAAGGTCGTCGTGCATCTGGCCAATGGCTACGACAACGCCA
ACTTCCGCTGGTTCTTCGACAACCTGCGCTCGGCAGGCGGCAAGTGGGACGTCATCGGCATGTCGCATTACCCCCCCGTC
GGCAGCTGGCAGGATTACAACAGCCGCCTGGACACCAACATGCGCGACATGATTGCGCGCTACGGCAGCGATGTGGTGAT
TTCCGAGGTCGGCATGGACTGGCAGCAGGCGGCCACCACCCGCGCCATGCTCAGCAACCTGCTCAGCCGCAGCAGCAGCA
TCGGCGCGCGCGTCCTCGGCGTGTTTTATTGGGAACCCAATGCCTACCCCGGCTGGCAGGGCTACACCATGGGCGCAGTC
AACAACAACGGCCAACTGACCGAAGCGCTGCAAGCGTTCTGA

Upstream 100 bases:

>100_bases
GCCAGGCACTTGTCACGCTGCGCACGCGCGCACGAGACAAGGCAGCGGGATCAAGCAAGGCGCCACCCGGCGCGACACTC
ATCGATCAAGGGAGCGTTCC

Downstream 100 bases:

>100_bases
CCAGCATGCTCCTACGGGGCGGCGCCCGCCGTGGGGGATGTATTGGCGCGCACCCGCTGACCACGCCATCGCGTAGGAGC
GCACCCGGGCGCGACGGGCG

Product: arabinogalactan endo-1,4-beta-galactosidase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MTIFCRHYHRVWLILLLSLCSAGVSAQGIAKGADVSWLNQQAANNPPQVFRDAAGNTTDFIKLFKDVGGNAIRLRVWVNP
SGGWNDGRDTLDKAKRAAAQGMRIMIDFHYSDSWADPGKQTKPAAWAGHSVAQLNTDVYSHTQGILKYLKDNGITVSWVQ
VGNEINSGMLWNEGKTPNFATLGQFINSGYNATKAVYPNAKVVVHLANGYDNANFRWFFDNLRSAGGKWDVIGMSHYPPV
GSWQDYNSRLDTNMRDMIARYGSDVVISEVGMDWQQAATTRAMLSNLLSRSSSIGARVLGVFYWEPNAYPGWQGYTMGAV
NNNGQLTEALQAF

Sequences:

>Translated_333_residues
MTIFCRHYHRVWLILLLSLCSAGVSAQGIAKGADVSWLNQQAANNPPQVFRDAAGNTTDFIKLFKDVGGNAIRLRVWVNP
SGGWNDGRDTLDKAKRAAAQGMRIMIDFHYSDSWADPGKQTKPAAWAGHSVAQLNTDVYSHTQGILKYLKDNGITVSWVQ
VGNEINSGMLWNEGKTPNFATLGQFINSGYNATKAVYPNAKVVVHLANGYDNANFRWFFDNLRSAGGKWDVIGMSHYPPV
GSWQDYNSRLDTNMRDMIARYGSDVVISEVGMDWQQAATTRAMLSNLLSRSSSIGARVLGVFYWEPNAYPGWQGYTMGAV
NNNGQLTEALQAF
>Mature_332_residues
TIFCRHYHRVWLILLLSLCSAGVSAQGIAKGADVSWLNQQAANNPPQVFRDAAGNTTDFIKLFKDVGGNAIRLRVWVNPS
GGWNDGRDTLDKAKRAAAQGMRIMIDFHYSDSWADPGKQTKPAAWAGHSVAQLNTDVYSHTQGILKYLKDNGITVSWVQV
GNEINSGMLWNEGKTPNFATLGQFINSGYNATKAVYPNAKVVVHLANGYDNANFRWFFDNLRSAGGKWDVIGMSHYPPVG
SWQDYNSRLDTNMRDMIARYGSDVVISEVGMDWQQAATTRAMLSNLLSRSSSIGARVLGVFYWEPNAYPGWQGYTMGAVN
NNGQLTEALQAF

Specific function: Unknown

COG id: COG3867

COG function: function code G; Arabinogalactan endo-1,4-beta-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011683
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07745 Glyco_hydro_53 [H]

EC number: NA

Molecular weight: Translated: 36845; Mature: 36714

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIFCRHYHRVWLILLLSLCSAGVSAQGIAKGADVSWLNQQAANNPPQVFRDAAGNTTDF
CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCHHHH
IKLFKDVGGNAIRLRVWVNPSGGWNDGRDTLDKAKRAAAQGMRIMIDFHYSDSWADPGKQ
HHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
TKPAAWAGHSVAQLNTDVYSHTQGILKYLKDNGITVSWVQVGNEINSGMLWNEGKTPNFA
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCHH
TLGQFINSGYNATKAVYPNAKVVVHLANGYDNANFRWFFDNLRSAGGKWDVIGMSHYPPV
HHHHHHHCCCCCCEEECCCCEEEEEEECCCCCCCEEEEEHHHHCCCCCEEEEECCCCCCC
GSWQDYNSRLDTNMRDMIARYGSDVVISEVGMDWQQAATTRAMLSNLLSRSSSIGARVLG
CCCCCHHHHCCCCHHHHHHHHCCCEEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE
VFYWEPNAYPGWQGYTMGAVNNNGQLTEALQAF
EEEECCCCCCCCCCEEEEEECCCCHHHHHHHCC
>Mature Secondary Structure 
TIFCRHYHRVWLILLLSLCSAGVSAQGIAKGADVSWLNQQAANNPPQVFRDAAGNTTDF
EEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCHHHH
IKLFKDVGGNAIRLRVWVNPSGGWNDGRDTLDKAKRAAAQGMRIMIDFHYSDSWADPGKQ
HHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC
TKPAAWAGHSVAQLNTDVYSHTQGILKYLKDNGITVSWVQVGNEINSGMLWNEGKTPNFA
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCHH
TLGQFINSGYNATKAVYPNAKVVVHLANGYDNANFRWFFDNLRSAGGKWDVIGMSHYPPV
HHHHHHHCCCCCCEEECCCCEEEEEEECCCCCCCEEEEEHHHHCCCCCEEEEECCCCCCC
GSWQDYNSRLDTNMRDMIARYGSDVVISEVGMDWQQAATTRAMLSNLLSRSSSIGARVLG
CCCCCHHHHCCCCHHHHHHHHCCCEEEEHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEE
VFYWEPNAYPGWQGYTMGAVNNNGQLTEALQAF
EEEECCCCCCCCCCEEEEEECCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA