Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is groES [H]
Identifier: 21241312
GI number: 21241312
Start: 632271
End: 632558
Strand: Direct
Name: groES [H]
Synonym: XAC0541
Alternate gene names: 21241312
Gene position: 632271-632558 (Clockwise)
Preceding gene: 21241310
Following gene: 21241313
Centisome position: 12.22
GC content: 62.85
Gene sequence:
>288_bases ATGAGCATCAAGCCGCTTCACGACCGCGTTGTAGTCAAGCCGATCGAAGCCGACGAAGTTTCCGCCGGCGGCATCGTGAT TCCGGACTCCGCCAAGGAAAAGTCCACCAAGGGTGAAGTCGTCGCGATCGGCGCCGGCAAGCCGCTGGACAACGGCAGCC TGCGCGCGCCGGTGGTCAAGGTTGGCGACAAGGTCATCTACGGCCAGTACGCCGGCAGCAGCTACAAGTCCGAAGGCGTC GAGTACAAGGTGCTGCGCGAAGACGACATCCTGGCCGTCATCGGCTGA
Upstream 100 bases:
>100_bases TGTCGGGTTTTTTCCGCGCGCTGTGCTGGCAGTCGTCATGTACGAGTGCTAACATCGCCGATAATTTCCAGGCCAATCAA ACACTTAAGAGGTCTTCTCT
Downstream 100 bases:
>100_bases TCAGGCGCTATGCGCCGGGAATCGGGAGTTGGGAATCGGGAATGGGCAAAGCGGCTAGCGTCCTTCGCCATCCCACCCCA CCCCGATTCACGCTGTTGAT
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10 [H]
Number of amino acids: Translated: 95; Mature: 94
Protein sequence:
>95_residues MSIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLRAPVVKVGDKVIYGQYAGSSYKSEGV EYKVLREDDILAVIG
Sequences:
>Translated_95_residues MSIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLRAPVVKVGDKVIYGQYAGSSYKSEGV EYKVLREDDILAVIG >Mature_94_residues SIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLRAPVVKVGDKVIYGQYAGSSYKSEGVE YKVLREDDILAVIG
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
Organism=Escherichia coli, GI1790585, Length=95, Percent_Identity=49.4736842105263, Blast_Score=85, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17555568, Length=93, Percent_Identity=38.7096774193548, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324594, Length=95, Percent_Identity=42.1052631578947, Blast_Score=64, Evalue=3e-12,
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 9980; Mature: 9848
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLRAPVVK CCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEE VGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVIG CCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEC >Mature Secondary Structure SIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLRAPVVK CCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEE VGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVIG CCCEEEEEECCCCCCCCCCCEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA