Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is gctA [H]
Identifier: 21241138
GI number: 21241138
Start: 434923
End: 435786
Strand: Direct
Name: gctA [H]
Synonym: XAC0364
Alternate gene names: 21241138
Gene position: 434923-435786 (Clockwise)
Preceding gene: 21241131
Following gene: 21241139
Centisome position: 8.4
GC content: 65.39
Gene sequence:
>864_bases ATGGCCGAAATCGTCGCTCTCGCGGATGCGGTGTCGCAGCTGATCGCCGATGGCGATTGTGTGGCGATGGAAGGCTTCAC ACACCTGATTCCGCATGCGGCCGGGCACGAGGTCATTCGCCAGCGCAAGCGCGCGCTGCGCCTGGTGCGCATGACTCCCG ACCTGATCTACGACCAGTTGATCGGCGCCGGTTGCGCTGCGGCGCTGCGGTTTTCCTGGGGCGGCAATCCCGGCGTCGGT TCGTTGCACCGGCTGCGCGATGCGGTGGAACACGCCTGGCCGCAGCCGCTGCAGATTCGCGAACACAGCCACGCCGATAT GGCCAATGCCTATGTGGCCGGTGCGTCGGGGCTGCCGTTTGCAGTGCTGCGTGGGTATGTCGGCTCGGATCTGCCGCGCG TCAACGACAGCATCAAGTTCCTGCAGTGCCCGTATACCGGCCAAACGCTGGCCACCACGCCGGCAGTCAATCCCGATGTC ACCGTGATCCACGCCCAGCGGGCCGACCGCCGCGGCAACGTATTGCTCTGGGGCATTCTGGGCGTGCAGAAGGAAGCCGC ATTGGCAGCGCGCAAGGTGATCGTGACGGTGGAAGAGATCGTCGACAGCCTCGACGCGCCGCCCAATGCCTGCATCCTGC CGCGCTGGGTCGTCGATGCGGTGTGCGTTGTTCCCGGTGGCGCGGCGCCCTCGTATGCGCATGGCTATTACGCGCGCGAC AATCGCTTCTATCTGGCCTGGGATGCGATCGCGCGCGACCGTGCACGCTTCGATGCCTGGATCCAGGCGCATATTCTCGA CACCGACGATTTCGCCGGTTTTCAGCGCGTGTATGCGCAGTCGCAGCAGCAGGTGGCCGCATGA
Upstream 100 bases:
>100_bases AATTGTGCGAATATCGATTTGAATCACCGATTATCGGATTGACCGCTTCGCCGGCCGCGCCTACCGTGACCCCACGCTCG CTGTGCTGGAAGGGAACGCA
Downstream 100 bases:
>100_bases GCGCCTACAGCACCAACGAGATGATGACGGTAGCCGCCGCGCGTCGCTTGCCCGACGGCGCGGTGTGTTTCGTCGGTATC GGCTTGCCGTCCACTGCCGC
Product: glutaconate CoA transferase subunit A
Products: NA
Alternate protein names: 3-oxoadipate:succinyl-CoA transferase subunit A; Beta-ketoadipate:succinyl-CoA transferase subunit A [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAEIVALADAVSQLIADGDCVAMEGFTHLIPHAAGHEVIRQRKRALRLVRMTPDLIYDQLIGAGCAAALRFSWGGNPGVG SLHRLRDAVEHAWPQPLQIREHSHADMANAYVAGASGLPFAVLRGYVGSDLPRVNDSIKFLQCPYTGQTLATTPAVNPDV TVIHAQRADRRGNVLLWGILGVQKEAALAARKVIVTVEEIVDSLDAPPNACILPRWVVDAVCVVPGGAAPSYAHGYYARD NRFYLAWDAIARDRARFDAWIQAHILDTDDFAGFQRVYAQSQQQVAA
Sequences:
>Translated_287_residues MAEIVALADAVSQLIADGDCVAMEGFTHLIPHAAGHEVIRQRKRALRLVRMTPDLIYDQLIGAGCAAALRFSWGGNPGVG SLHRLRDAVEHAWPQPLQIREHSHADMANAYVAGASGLPFAVLRGYVGSDLPRVNDSIKFLQCPYTGQTLATTPAVNPDV TVIHAQRADRRGNVLLWGILGVQKEAALAARKVIVTVEEIVDSLDAPPNACILPRWVVDAVCVVPGGAAPSYAHGYYARD NRFYLAWDAIARDRARFDAWIQAHILDTDDFAGFQRVYAQSQQQVAA >Mature_286_residues AEIVALADAVSQLIADGDCVAMEGFTHLIPHAAGHEVIRQRKRALRLVRMTPDLIYDQLIGAGCAAALRFSWGGNPGVGS LHRLRDAVEHAWPQPLQIREHSHADMANAYVAGASGLPFAVLRGYVGSDLPRVNDSIKFLQCPYTGQTLATTPAVNPDVT VIHAQRADRRGNVLLWGILGVQKEAALAARKVIVTVEEIVDSLDAPPNACILPRWVVDAVCVVPGGAAPSYAHGYYARDN RFYLAWDAIARDRARFDAWIQAHILDTDDFAGFQRVYAQSQQQVAA
Specific function: Catalyzes the CoA transfer from succinate to 3- oxoadipate (beta-ketoadipate) [H]
COG id: COG1788
COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-oxoacid CoA-transferase subunit A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004165 [H]
Pfam domain/function: PF01144 CoA_trans [H]
EC number: =2.8.3.6 [H]
Molecular weight: Translated: 31221; Mature: 31090
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIVALADAVSQLIADGDCVAMEGFTHLIPHAAGHEVIRQRKRALRLVRMTPDLIYDQL CCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH IGAGCAAALRFSWGGNPGVGSLHRLRDAVEHAWPQPLQIREHSHADMANAYVAGASGLPF HHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHEEECCCCCCH AVLRGYVGSDLPRVNDSIKFLQCPYTGQTLATTPAVNPDVTVIHAQRADRRGNVLLWGIL HHHHHHHCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEC GVQKEAALAARKVIVTVEEIVDSLDAPPNACILPRWVVDAVCVVPGGAAPSYAHGYYARD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCEEEEC NRFYLAWDAIARDRARFDAWIQAHILDTDDFAGFQRVYAQSQQQVAA CEEEEEEHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AEIVALADAVSQLIADGDCVAMEGFTHLIPHAAGHEVIRQRKRALRLVRMTPDLIYDQL CHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH IGAGCAAALRFSWGGNPGVGSLHRLRDAVEHAWPQPLQIREHSHADMANAYVAGASGLPF HHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHEEECCCCCCH AVLRGYVGSDLPRVNDSIKFLQCPYTGQTLATTPAVNPDVTVIHAQRADRRGNVLLWGIL HHHHHHHCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCEEEEEECCCCCCCCEEEEEEC GVQKEAALAARKVIVTVEEIVDSLDAPPNACILPRWVVDAVCVVPGGAAPSYAHGYYARD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCEEEEC NRFYLAWDAIARDRARFDAWIQAHILDTDDFAGFQRVYAQSQQQVAA CEEEEEEHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11741863 [H]