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The map label for this gene is gctB [H]

Identifier: 21241139

GI number: 21241139

Start: 435783

End: 436571

Strand: Direct

Name: gctB [H]

Synonym: XAC0365

Alternate gene names: 21241139

Gene position: 435783-436571 (Clockwise)

Preceding gene: 21241138

Following gene: 21241140

Centisome position: 8.42

GC content: 68.31

Gene sequence:

>789_bases
ATGAGCGCCTACAGCACCAACGAGATGATGACGGTAGCCGCCGCGCGTCGCTTGCCCGACGGCGCGGTGTGTTTCGTCGG
TATCGGCTTGCCGTCCACTGCCGCCAATCTGGCACGGCTTACGCATGCGCCCGACGTCACCTTGATCTACGAATCCGGCC
CGATCGGTGCGCGCCCGCAGGTGTTGCCATTATCCATCGGCGACGGCGAGCTGGCAGAAACTGCCGACACCGTCGTCTCC
ACGCCAGAGATCTTCCGCTACTGGCTGCAAGGCGGGCGCGTGGATGTGGGCTTTCTGGGCGCGGCGCAGATCGATCGGCA
CGCCAACCTCAATACCACCGTGATCGGCTCCTACGATGCGCCGAAAACGCGCTTGCCCGGCGCCGGTGGCGCGCCGGAGA
TTGCGGCCAGCGCCAGGCAGGTGTTCATCATCATGCGCCAGTCCGAACGCAGCTTCGTTTCGAGGTTGGACTTCATCACC
ACGGTCGGGCATCTGGACGGTGGCGATGCGCGCGCGCGCGCCGGCCTCCCCGGCGCCGGTCCCACCGTGGTCGTCACCGA
CCTGTGCGTGATGGAGCCCGATCCCGTGACCCGCGAACTCACCGTCACCTCGTTGCACCCTGGCACCACGCGCGAGCAGG
TCAGCGCGGCGACCGGGTGGCCGATCCGGTTCGCCGCCGACCTTGCACACACCACGCCGCCCCGTGCCGCCGAGCTGGAC
GCCTTGCGCGCGCTGCAGGCACGCACCGATGCAGCGCATGGTGCCCAGGCAACGGGAGCCCAGGCATGA

Upstream 100 bases:

>100_bases
GTGCACGCTTCGATGCCTGGATCCAGGCGCATATTCTCGACACCGACGATTTCGCCGGTTTTCAGCGCGTGTATGCGCAG
TCGCAGCAGCAGGTGGCCGC

Downstream 100 bases:

>100_bases
ATGAGGTCTATCTGATCGATGGCATTCGCACGCCGATCGGCCGTTACGCTGGCGCCTTGTCCAGCGTACGCGCCGACGAC
CTGGGCGCAGTGCCGATCGC

Product: glutaconate CoA transferase subunit B

Products: NA

Alternate protein names: 3-oxoadipate:succinyl-CoA transferase subunit B; Beta-ketoadipate:succinyl-CoA transferase subunit B [H]

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSAYSTNEMMTVAAARRLPDGAVCFVGIGLPSTAANLARLTHAPDVTLIYESGPIGARPQVLPLSIGDGELAETADTVVS
TPEIFRYWLQGGRVDVGFLGAAQIDRHANLNTTVIGSYDAPKTRLPGAGGAPEIAASARQVFIIMRQSERSFVSRLDFIT
TVGHLDGGDARARAGLPGAGPTVVVTDLCVMEPDPVTRELTVTSLHPGTTREQVSAATGWPIRFAADLAHTTPPRAAELD
ALRALQARTDAAHGAQATGAQA

Sequences:

>Translated_262_residues
MSAYSTNEMMTVAAARRLPDGAVCFVGIGLPSTAANLARLTHAPDVTLIYESGPIGARPQVLPLSIGDGELAETADTVVS
TPEIFRYWLQGGRVDVGFLGAAQIDRHANLNTTVIGSYDAPKTRLPGAGGAPEIAASARQVFIIMRQSERSFVSRLDFIT
TVGHLDGGDARARAGLPGAGPTVVVTDLCVMEPDPVTRELTVTSLHPGTTREQVSAATGWPIRFAADLAHTTPPRAAELD
ALRALQARTDAAHGAQATGAQA
>Mature_261_residues
SAYSTNEMMTVAAARRLPDGAVCFVGIGLPSTAANLARLTHAPDVTLIYESGPIGARPQVLPLSIGDGELAETADTVVST
PEIFRYWLQGGRVDVGFLGAAQIDRHANLNTTVIGSYDAPKTRLPGAGGAPEIAASARQVFIIMRQSERSFVSRLDFITT
VGHLDGGDARARAGLPGAGPTVVVTDLCVMEPDPVTRELTVTSLHPGTTREQVSAATGWPIRFAADLAHTTPPRAAELDA
LRALQARTDAAHGAQATGAQA

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

None

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004165 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.6 [H]

Molecular weight: Translated: 27345; Mature: 27214

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYSTNEMMTVAAARRLPDGAVCFVGIGLPSTAANLARLTHAPDVTLIYESGPIGARPQ
CCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCE
VLPLSIGDGELAETADTVVSTPEIFRYWLQGGRVDVGFLGAAQIDRHANLNTTVIGSYDA
EEEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEECCHHHHHCCCCCCEEEEECCCC
PKTRLPGAGGAPEIAASARQVFIIMRQSERSFVSRLDFITTVGHLDGGDARARAGLPGAG
CCCCCCCCCCCCHHHHCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCC
PTVVVTDLCVMEPDPVTRELTVTSLHPGTTREQVSAATGWPIRFAADLAHTTPPRAAELD
CEEEEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHCCCCCEEEEHHHHCCCCCCHHHHH
ALRALQARTDAAHGAQATGAQA
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SAYSTNEMMTVAAARRLPDGAVCFVGIGLPSTAANLARLTHAPDVTLIYESGPIGARPQ
CCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCE
VLPLSIGDGELAETADTVVSTPEIFRYWLQGGRVDVGFLGAAQIDRHANLNTTVIGSYDA
EEEEECCCCCHHHHHHHHHCCHHHHHHHHCCCCEEEEECCHHHHHCCCCCCEEEEECCCC
PKTRLPGAGGAPEIAASARQVFIIMRQSERSFVSRLDFITTVGHLDGGDARARAGLPGAG
CCCCCCCCCCCCHHHHCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCC
PTVVVTDLCVMEPDPVTRELTVTSLHPGTTREQVSAATGWPIRFAADLAHTTPPRAAELD
CEEEEEEEEEECCCCCCEEEEEEEECCCCCHHHHHHCCCCCEEEEHHHHCCCCCCHHHHH
ALRALQARTDAAHGAQATGAQA
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11741863 [H]