Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21241126
Identifier: 21241126
GI number: 21241126
Start: 419917
End: 420909
Strand: Direct
Name: 21241126
Synonym: XAC0352
Alternate gene names: NA
Gene position: 419917-420909 (Clockwise)
Preceding gene: 21241125
Following gene: 21241127
Centisome position: 8.11
GC content: 61.53
Gene sequence:
>993_bases ATGCGTGGCGCGGGTGTGGCAGCAGGCTGGCGGCTGCGCGCGTTGCTCTGCCTGGCGGCAGGCCTGGCAGCGGGCGCGGC GCCTGCGCAAAGTGCGCCACAGAGCGCGGCGCTGACCAATGGCATCAACACCGGGGGCACCAGTTTCCTGGATGGCTTCA CCAGCACCACGCCCGGCTTGGCGGTCGTCACCTATCTGCGGCACAACGCGCTGGATGCCATCAAGGACGCACGTGGCAAC GATATCCCGGTGTTCGACAATCCGCGGATCGATTCCACCGTGTTGCTGACCCAGTTCGCTTACGTCACGCCCTATCAGGT ATTCGGCGGCTCGCTCGGCATCACTGCGCTGGTGCCGCTGGTCAATCTGGATGCCTCTTTCGGCCGCAACAGCATTGCCA CGCTGCGCGACAATGGCGCCGGCGTGGGTGATGTGACGTTCGGACCGTATCTGCAAATGCCACCTTTGATACGAAACGGG CGACCGGTGTTCTCGCAGCGGTTCGAATTCGACGCCGTGGCACCGATTGGCAAGTACGACGGCAATCGCGATCTCAACCA GAGCTCCGGTTATTGGTCGCTCATTCCAAGCTACGCATTCACGGTACTGCCCACGCCCAATTGGGAAGTCAGCGCACGCA TCAACTACATCTACAACTTTCGCAGCGAGCGCCGTCCGAATTTGCCGCCAGGCTTCGACTTCCGCAATGGTCAGGCAGGC GATGCGGGATGGATCAATTTCGCCACCTCCTGGGAAGTGGCACCGAAGCTGCGGCTGGGCATCAATGCCTATTACCTGAC CCAGTTCCGCGACAACCGCACCAACGACCAGCGCGTGCCGGACAGCCGTCAGCGCGCGTTCTATGCAGGGCCGGGTGGCG TGTGGCGCTTTGATGCGAAAAACATCCTGTTCGCCAACGTCTATCTACCGGTGGAGGTCAGGAATGCCGCGTCCGGCAAC AACGTCAATTTCGAGTATGTCCATGTGTTCTAG
Upstream 100 bases:
>100_bases GCGTAGCGCGGGGCGCGCGCTTGCCTGACGTTTGTGATGTGGCACGCACCGCTGTTCCTTTCCAACGCTGGAGATCCCTG CAGTGATTCGATCATCGGTG
Downstream 100 bases:
>100_bases CGCCGGCACGGCTGGCTCCTTTGGAGGATGGCGATGAATTTGCAGAACAAGACGATCGTGGTGACCGGCGTGGCGTCGGG CATTGGCGCGGAGGTCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Meta-Pathway Phenol Degradation-Like Protein; Signal Peptide; Phenol Degradation-Like Protein; Regulatory Protein Involved In In Phenol Degradation; Protein Involved In Meta-Pathway Of Phenol Degradation; Involved In Meta-Pathway Of Phenol Degradation Protein; MetA-Pathway Phenol Degradation-Like Protein; Protein Involved In Meta-Pathway Of Phenol Degradation-Like; Secreted Protein; Lipoprotein; Meta-Pathway Phenol Degradation Protein
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MRGAGVAAGWRLRALLCLAAGLAAGAAPAQSAPQSAALTNGINTGGTSFLDGFTSTTPGLAVVTYLRHNALDAIKDARGN DIPVFDNPRIDSTVLLTQFAYVTPYQVFGGSLGITALVPLVNLDASFGRNSIATLRDNGAGVGDVTFGPYLQMPPLIRNG RPVFSQRFEFDAVAPIGKYDGNRDLNQSSGYWSLIPSYAFTVLPTPNWEVSARINYIYNFRSERRPNLPPGFDFRNGQAG DAGWINFATSWEVAPKLRLGINAYYLTQFRDNRTNDQRVPDSRQRAFYAGPGGVWRFDAKNILFANVYLPVEVRNAASGN NVNFEYVHVF
Sequences:
>Translated_330_residues MRGAGVAAGWRLRALLCLAAGLAAGAAPAQSAPQSAALTNGINTGGTSFLDGFTSTTPGLAVVTYLRHNALDAIKDARGN DIPVFDNPRIDSTVLLTQFAYVTPYQVFGGSLGITALVPLVNLDASFGRNSIATLRDNGAGVGDVTFGPYLQMPPLIRNG RPVFSQRFEFDAVAPIGKYDGNRDLNQSSGYWSLIPSYAFTVLPTPNWEVSARINYIYNFRSERRPNLPPGFDFRNGQAG DAGWINFATSWEVAPKLRLGINAYYLTQFRDNRTNDQRVPDSRQRAFYAGPGGVWRFDAKNILFANVYLPVEVRNAASGN NVNFEYVHVF >Mature_330_residues MRGAGVAAGWRLRALLCLAAGLAAGAAPAQSAPQSAALTNGINTGGTSFLDGFTSTTPGLAVVTYLRHNALDAIKDARGN DIPVFDNPRIDSTVLLTQFAYVTPYQVFGGSLGITALVPLVNLDASFGRNSIATLRDNGAGVGDVTFGPYLQMPPLIRNG RPVFSQRFEFDAVAPIGKYDGNRDLNQSSGYWSLIPSYAFTVLPTPNWEVSARINYIYNFRSERRPNLPPGFDFRNGQAG DAGWINFATSWEVAPKLRLGINAYYLTQFRDNRTNDQRVPDSRQRAFYAGPGGVWRFDAKNILFANVYLPVEVRNAASGN NVNFEYVHVF
Specific function: Unknown
COG id: COG4313
COG function: function code C; Protein involved in meta-pathway of phenol degradation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35973; Mature: 35973
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGAGVAAGWRLRALLCLAAGLAAGAAPAQSAPQSAALTNGINTGGTSFLDGFTSTTPGL CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCHH AVVTYLRHNALDAIKDARGNDIPVFDNPRIDSTVLLTQFAYVTPYQVFGGSLGITALVPL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHCCHHHHCCCCCHHHHHHH VNLDASFGRNSIATLRDNGAGVGDVTFGPYLQMPPLIRNGRPVFSQRFEFDAVAPIGKYD HCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCCCCCCCCCCCCC GNRDLNQSSGYWSLIPSYAFTVLPTPNWEVSARINYIYNFRSERRPNLPPGFDFRNGQAG CCCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC DAGWINFATSWEVAPKLRLGINAYYLTQFRDNRTNDQRVPDSRQRAFYAGPGGVWRFDAK CCCEEEEECCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCHHCEEEECCCCEEEECCC NILFANVYLPVEVRNAASGNNVNFEYVHVF CEEEEEEEEEEEEECCCCCCCCCEEEEEEC >Mature Secondary Structure MRGAGVAAGWRLRALLCLAAGLAAGAAPAQSAPQSAALTNGINTGGTSFLDGFTSTTPGL CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCHH AVVTYLRHNALDAIKDARGNDIPVFDNPRIDSTVLLTQFAYVTPYQVFGGSLGITALVPL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHCCHHHHCCCCCHHHHHHH VNLDASFGRNSIATLRDNGAGVGDVTFGPYLQMPPLIRNGRPVFSQRFEFDAVAPIGKYD HCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCCCCCCCCCCCCC GNRDLNQSSGYWSLIPSYAFTVLPTPNWEVSARINYIYNFRSERRPNLPPGFDFRNGQAG CCCCCCCCCCEEEEECCCEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCC DAGWINFATSWEVAPKLRLGINAYYLTQFRDNRTNDQRVPDSRQRAFYAGPGGVWRFDAK CCCEEEEECCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCHHCEEEECCCCEEEECCC NILFANVYLPVEVRNAASGNNVNFEYVHVF CEEEEEEEEEEEEECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA