Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21241125
Identifier: 21241125
GI number: 21241125
Start: 419273
End: 419749
Strand: Direct
Name: 21241125
Synonym: XAC0351
Alternate gene names: NA
Gene position: 419273-419749 (Clockwise)
Preceding gene: 21241124
Following gene: 21241126
Centisome position: 8.1
GC content: 67.09
Gene sequence:
>477_bases ATGCCCGTCACCGCCCTTGCTACGCCCTTGCCCGATGCCGTCACCACGGTGGATCAGGCGCGGCTGCTGCGGTTGCTGGG GTATCGCATCACCCGCACCGAATTGATGGTGCGGCGGATGTTCCAGGAGTGCGTGGCCGCGTTCGACCTCAAGCCGGTCG ACTTCTCGCTGCTGATGCTGGTGGATGGCAACCCGGGCATCAACCAGCGCCAGATCGGCGATGTGCTGCACGTGTCGCCG CCGAATCTGGCGATCGTGGTGGCCAGGCTGGTCAAGCGTCGCTTGCTGCGGCAGGTGCGTGGTCGGCAGGACCGGCGCAT GCAGCACCTTTCGCTCACCGCGGCCGGTGCCGCGCTCCTGGCCGCCGCCGAGGCCGAAGTACTGCGCATGGAACAGCAAC TCAGTGCCGTACTCGGTTCCAGCGAAGCCCCGTTGTTGCGCGCCCTGGACCGTCTGGACCGTCTGGACACGCCGTAA
Upstream 100 bases:
>100_bases CCGGTGGCGTCTACAATGCGATGCACGCCGTGGATCGGCGTTGCGGATGCGGCGCTTTGCGCGTACCGGTCCGCCCGCTG CCTTCGTCGCGAGAACCGCC
Downstream 100 bases:
>100_bases CCCGCCTCCGTCGGCGGCCCGCCGCCCGGCAGCGATTCTCAACGAACGTTTCCACTGCACGTGCTGTGCGTAGCGCGGGG CGCGCGCTTGCCTGACGTTT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: MarR Family Transcription Regulator Protein; Transcriptional Regulator MarR Family; Transcriptional Regulator Marr Family Protein
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MPVTALATPLPDAVTTVDQARLLRLLGYRITRTELMVRRMFQECVAAFDLKPVDFSLLMLVDGNPGINQRQIGDVLHVSP PNLAIVVARLVKRRLLRQVRGRQDRRMQHLSLTAAGAALLAAAEAEVLRMEQQLSAVLGSSEAPLLRALDRLDRLDTP
Sequences:
>Translated_158_residues MPVTALATPLPDAVTTVDQARLLRLLGYRITRTELMVRRMFQECVAAFDLKPVDFSLLMLVDGNPGINQRQIGDVLHVSP PNLAIVVARLVKRRLLRQVRGRQDRRMQHLSLTAAGAALLAAAEAEVLRMEQQLSAVLGSSEAPLLRALDRLDRLDTP >Mature_157_residues PVTALATPLPDAVTTVDQARLLRLLGYRITRTELMVRRMFQECVAAFDLKPVDFSLLMLVDGNPGINQRQIGDVLHVSPP NLAIVVARLVKRRLLRQVRGRQDRRMQHLSLTAAGAALLAAAEAEVLRMEQQLSAVLGSSEAPLLRALDRLDRLDTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17496; Mature: 17365
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTALATPLPDAVTTVDQARLLRLLGYRITRTELMVRRMFQECVAAFDLKPVDFSLLML CCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE VDGNPGINQRQIGDVLHVSPPNLAIVVARLVKRRLLRQVRGRQDRRMQHLSLTAAGAALL ECCCCCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AAAEAEVLRMEQQLSAVLGSSEAPLLRALDRLDRLDTP HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure PVTALATPLPDAVTTVDQARLLRLLGYRITRTELMVRRMFQECVAAFDLKPVDFSLLML CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE VDGNPGINQRQIGDVLHVSPPNLAIVVARLVKRRLLRQVRGRQDRRMQHLSLTAAGAALL ECCCCCCCHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH AAAEAEVLRMEQQLSAVLGSSEAPLLRALDRLDRLDTP HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA