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The map label for this gene is rpfG [H]

Identifier: 21241124

GI number: 21241124

Start: 417517

End: 418776

Strand: Direct

Name: rpfG [H]

Synonym: XAC0350

Alternate gene names: 21241124

Gene position: 417517-418776 (Clockwise)

Preceding gene: 21241123

Following gene: 21241125

Centisome position: 8.07

GC content: 64.29

Gene sequence:

>1260_bases
ATGCTCAGAACCATCGACTCAGATCAACTCCGCCCCGGCATGTATGTCTACAAGCTGCTGGGCGCGTGGGTGCACCATCC
GTTCTGGAAGACATCGTTTCTGGTCGATTCCGACGATGTGGAGAAGATCCATGACAGCCGCATCGAGCAGCTGGTAATCG
ACACCGCGCGCGGGCTCGATGTGGAGGCGCCCATCACCTCTGGCGCGTCCGCCGAACCGGGCGTGCCGCCGAGCCCGGCG
CCTGCCCCGGCGCCGGCAGCGCCCGAACCGCCGGAGCCTGCTGCCACGTCCCGTAGCGTGCGCACCAACAGCGTGACCGC
CCAGGTCGGCATCGAAGCGGAGGTGGTGCGCGCGCGGCGCATCTTCGAAGACGGCCGCGACATGGTCGAGGCGATGTTCC
GCGATGTGCGGCTGGGGCGCACCGTCGACACAGAAGCGGCCATGCCGCTGGTGGAAGCCATCAACGACTCGGTGCTCCGG
CATCCGCAGGCCTTGATCAGCGTGGCGCGGCTCAAGACCGCCGACGACTACACCTATCTGCATTCGATGGCCGTGGCCGG
GCTGATGAGCGGTTTGGCGCGCCAGCTCGGCCTGCCCGAATCGCAGGTGGTGGAAGCGGCGATGGGCGGCCTGCTGCACG
ACATGGGCAAGGCGGTGACACCGTTGGAAATTCTCAACAAGCCCGGCCGGCTCACCAACGAAGAGATGGAGGTCATGCGC
AAGCATCCGCTGGACGGGCATCGGCTGCTGGTGGCCGGCGGCGTGCAGAACGCGGTGGTGCTGGAAATCGCGTTGCATCA
CCACGAAAAGATGGATGGCAGCGGCTACCCGAATCAATTGGTGGGCGAGAATATTTCGTTGATGTCGCGGATGGGCGCGG
TCTGCGATGTCTACGATGCCATCAGCTCGGACCGGCCTTACAAACGCGGTTGGGATCCGGCCGAATCGCTCAAGCAAATG
GCGTCCTGGAAGGGCCATTTCGATCCTGTGGTGTTCCAGGCCTTCGTGCGCCGGCTGGGGATTTATCCGGTCGGCTCGCT
GGTGCGGCTGGAGTCGCAAAAACTTGCGGTGGTCATCGAACAGACGCCCGATGCGCTGCTCAAGCCCAAGGTGCGCGTGT
TCTATTCGGCCAAGCTGCGCAGCCACGTGTTGGTGCAGGACATCGACCTGTCGCGTCCGGACTGCCATGACCGCATTGCG
CAGATGGAAAGTCCTGCCGAATGGGGCTTCCGCGATCTGGAAAAGCTCTGGCTGCCCTGA

Upstream 100 bases:

>100_bases
TCCGGTCGCGCGCCAAAGAAATCGTGCTGTGTGCCGATAACACCGCAGACCGCCAAGTCGTGGCGGCCTTTCCCTGGACA
TTGTGCAGACCAGCGCCGGC

Downstream 100 bases:

>100_bases
GCGGGCTGCACAGGCGTTGAGCCGATGGCCTTCGCTGCAATGCGCGCGGTGCGTCATGCGCGCCGATCACCGTGACACCA
CCTGCACAGGTAGCGCCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MLRTIDSDQLRPGMYVYKLLGAWVHHPFWKTSFLVDSDDVEKIHDSRIEQLVIDTARGLDVEAPITSGASAEPGVPPSPA
PAPAPAAPEPPEPAATSRSVRTNSVTAQVGIEAEVVRARRIFEDGRDMVEAMFRDVRLGRTVDTEAAMPLVEAINDSVLR
HPQALISVARLKTADDYTYLHSMAVAGLMSGLARQLGLPESQVVEAAMGGLLHDMGKAVTPLEILNKPGRLTNEEMEVMR
KHPLDGHRLLVAGGVQNAVVLEIALHHHEKMDGSGYPNQLVGENISLMSRMGAVCDVYDAISSDRPYKRGWDPAESLKQM
ASWKGHFDPVVFQAFVRRLGIYPVGSLVRLESQKLAVVIEQTPDALLKPKVRVFYSAKLRSHVLVQDIDLSRPDCHDRIA
QMESPAEWGFRDLEKLWLP

Sequences:

>Translated_419_residues
MLRTIDSDQLRPGMYVYKLLGAWVHHPFWKTSFLVDSDDVEKIHDSRIEQLVIDTARGLDVEAPITSGASAEPGVPPSPA
PAPAPAAPEPPEPAATSRSVRTNSVTAQVGIEAEVVRARRIFEDGRDMVEAMFRDVRLGRTVDTEAAMPLVEAINDSVLR
HPQALISVARLKTADDYTYLHSMAVAGLMSGLARQLGLPESQVVEAAMGGLLHDMGKAVTPLEILNKPGRLTNEEMEVMR
KHPLDGHRLLVAGGVQNAVVLEIALHHHEKMDGSGYPNQLVGENISLMSRMGAVCDVYDAISSDRPYKRGWDPAESLKQM
ASWKGHFDPVVFQAFVRRLGIYPVGSLVRLESQKLAVVIEQTPDALLKPKVRVFYSAKLRSHVLVQDIDLSRPDCHDRIA
QMESPAEWGFRDLEKLWLP
>Mature_419_residues
MLRTIDSDQLRPGMYVYKLLGAWVHHPFWKTSFLVDSDDVEKIHDSRIEQLVIDTARGLDVEAPITSGASAEPGVPPSPA
PAPAPAAPEPPEPAATSRSVRTNSVTAQVGIEAEVVRARRIFEDGRDMVEAMFRDVRLGRTVDTEAAMPLVEAINDSVLR
HPQALISVARLKTADDYTYLHSMAVAGLMSGLARQLGLPESQVVEAAMGGLLHDMGKAVTPLEILNKPGRLTNEEMEVMR
KHPLDGHRLLVAGGVQNAVVLEIALHHHEKMDGSGYPNQLVGENISLMSRMGAVCDVYDAISSDRPYKRGWDPAESLKQM
ASWKGHFDPVVFQAFVRRLGIYPVGSLVRLESQKLAVVIEQTPDALLKPKVRVFYSAKLRSHVLVQDIDLSRPDCHDRIA
QMESPAEWGFRDLEKLWLP

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 46270; Mature: 46270

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTIDSDQLRPGMYVYKLLGAWVHHPFWKTSFLVDSDDVEKIHDSRIEQLVIDTARGLD
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCC
VEAPITSGASAEPGVPPSPAPAPAPAAPEPPEPAATSRSVRTNSVTAQVGIEAEVVRARR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH
IFEDGRDMVEAMFRDVRLGRTVDTEAAMPLVEAINDSVLRHPQALISVARLKTADDYTYL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH
HSMAVAGLMSGLARQLGLPESQVVEAAMGGLLHDMGKAVTPLEILNKPGRLTNEEMEVMR
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHH
KHPLDGHRLLVAGGVQNAVVLEIALHHHEKMDGSGYPNQLVGENISLMSRMGAVCDVYDA
HCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHH
ISSDRPYKRGWDPAESLKQMASWKGHFDPVVFQAFVRRLGIYPVGSLVRLESQKLAVVIE
HCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHEECCCCEEEEEE
QTPDALLKPKVRVFYSAKLRSHVLVQDIDLSRPDCHDRIAQMESPAEWGFRDLEKLWLP
CCCCHHHCCCHHEEEHHHHHHHHHEEECCCCCCCHHHHHHHCCCCHHCCHHHHHHHCCC
>Mature Secondary Structure
MLRTIDSDQLRPGMYVYKLLGAWVHHPFWKTSFLVDSDDVEKIHDSRIEQLVIDTARGLD
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCC
VEAPITSGASAEPGVPPSPAPAPAPAAPEPPEPAATSRSVRTNSVTAQVGIEAEVVRARR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHH
IFEDGRDMVEAMFRDVRLGRTVDTEAAMPLVEAINDSVLRHPQALISVARLKTADDYTYL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHH
HSMAVAGLMSGLARQLGLPESQVVEAAMGGLLHDMGKAVTPLEILNKPGRLTNEEMEVMR
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHH
KHPLDGHRLLVAGGVQNAVVLEIALHHHEKMDGSGYPNQLVGENISLMSRMGAVCDVYDA
HCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHH
ISSDRPYKRGWDPAESLKQMASWKGHFDPVVFQAFVRRLGIYPVGSLVRLESQKLAVVIE
HCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHEECCCCEEEEEE
QTPDALLKPKVRVFYSAKLRSHVLVQDIDLSRPDCHDRIAQMESPAEWGFRDLEKLWLP
CCCCHHHCCCHHEEEHHHHHHHHHEEECCCCCCCHHHHHHHCCCCHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]