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The map label for this gene is 21241027

Identifier: 21241027

GI number: 21241027

Start: 301169

End: 301930

Strand: Reverse

Name: 21241027

Synonym: XAC0253

Alternate gene names: NA

Gene position: 301930-301169 (Counterclockwise)

Preceding gene: 21241028

Following gene: 21241026

Centisome position: 5.83

GC content: 67.06

Gene sequence:

>762_bases
ATGCCCGCATCCGCTTCCCCGCAGGGTTCCGTCACATCGAACCCAGCTGAGTCGTGTTATGCCCAAAGCGCGGCGCCGGC
TGCGTTACGCGCGCGGCTACAGTGCAGTTGGCAATTTCGCCAGGGCGGTCGCGCGACGCAACCGGTGCTGGTGTTGCCCG
ATGGCAGCGTCGATCTGATCTGGGATGGCAGCGAAGTATTCGTCGCCGGACCGGATCGCATGGCCAATCCTGCATCGGTG
GCAGCAGGCACGACGTTGACCGGTGTCCGTCTGGCGGCGGGCGTGGCGGCCGGTCTGCTGCAGCTGCCGTTACACGCCAT
TGCCGACCAACGCGTCGCGCTGGAATCGTTATGGGGCGTGCAGGGCCGCATGTGGCAGCATCGCCTGGAAGACGGTGCTG
ATCCGTTACAGACCTTGCAGGCACTCTGCCAACAGCACGCCGCAGCGCGCGATCCGCAGATGGCTTGGCTGTTCGAACAA
CTGGCCGTCGGCACGCCGACACGGCTAAGCGCATTGACCGATGCGTTGGGGATCAGCGAGCGTTCGCTGCGCCGCCGCTG
TCAGGACGCATTCGGCTACGGCAGCAAGACGCTGCAGCGCGTCCTGCGCCTGCAGCGCTTCCTGCGGATCGTGCGAGGGC
ACCGCAACTTGACCGAGGCCGCGCTGCACGCCGGCTACGGCGATGCACCGCACCTGGTGCGCGATGCACGTCAGCTCACC
GGGCTGAGCCCGCGCGCACTGGTGCAGCAGCACGCACGCTGA

Upstream 100 bases:

>100_bases
TGCTGCGGTGCCGCGTCAGGCCGGATACCGTGCATGCAACTGCGCTGCGGCCGAGCGCATGGCGTTGGATCACCGCGCGC
TCGAGGTTGCGGCACTGCAC

Downstream 100 bases:

>100_bases
GTTGGCCGTTTTCGCCAAGCCACCGGCGTGCGCCATCCGCATGCTGTGCACTTACTCAGGAGCACGCCATGACCGACGCC
ACGCAGCACCGCATCGATTA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MPASASPQGSVTSNPAESCYAQSAAPAALRARLQCSWQFRQGGRATQPVLVLPDGSVDLIWDGSEVFVAGPDRMANPASV
AAGTTLTGVRLAAGVAAGLLQLPLHAIADQRVALESLWGVQGRMWQHRLEDGADPLQTLQALCQQHAAARDPQMAWLFEQ
LAVGTPTRLSALTDALGISERSLRRRCQDAFGYGSKTLQRVLRLQRFLRIVRGHRNLTEAALHAGYGDAPHLVRDARQLT
GLSPRALVQQHAR

Sequences:

>Translated_253_residues
MPASASPQGSVTSNPAESCYAQSAAPAALRARLQCSWQFRQGGRATQPVLVLPDGSVDLIWDGSEVFVAGPDRMANPASV
AAGTTLTGVRLAAGVAAGLLQLPLHAIADQRVALESLWGVQGRMWQHRLEDGADPLQTLQALCQQHAAARDPQMAWLFEQ
LAVGTPTRLSALTDALGISERSLRRRCQDAFGYGSKTLQRVLRLQRFLRIVRGHRNLTEAALHAGYGDAPHLVRDARQLT
GLSPRALVQQHAR
>Mature_252_residues
PASASPQGSVTSNPAESCYAQSAAPAALRARLQCSWQFRQGGRATQPVLVLPDGSVDLIWDGSEVFVAGPDRMANPASVA
AGTTLTGVRLAAGVAAGLLQLPLHAIADQRVALESLWGVQGRMWQHRLEDGADPLQTLQALCQQHAAARDPQMAWLFEQL
AVGTPTRLSALTDALGISERSLRRRCQDAFGYGSKTLQRVLRLQRFLRIVRGHRNLTEAALHAGYGDAPHLVRDARQLTG
LSPRALVQQHAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27260; Mature: 27129

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASASPQGSVTSNPAESCYAQSAAPAALRARLQCSWQFRQGGRATQPVLVLPDGSVDLI
CCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE
WDGSEVFVAGPDRMANPASVAAGTTLTGVRLAAGVAAGLLQLPLHAIADQRVALESLWGV
ECCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QGRMWQHRLEDGADPLQTLQALCQQHAAARDPQMAWLFEQLAVGTPTRLSALTDALGISE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCH
RSLRRRCQDAFGYGSKTLQRVLRLQRFLRIVRGHRNLTEAALHAGYGDAPHLVRDARQLT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHC
GLSPRALVQQHAR
CCCHHHHHHHHCC
>Mature Secondary Structure 
PASASPQGSVTSNPAESCYAQSAAPAALRARLQCSWQFRQGGRATQPVLVLPDGSVDLI
CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE
WDGSEVFVAGPDRMANPASVAAGTTLTGVRLAAGVAAGLLQLPLHAIADQRVALESLWGV
ECCCEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QGRMWQHRLEDGADPLQTLQALCQQHAAARDPQMAWLFEQLAVGTPTRLSALTDALGISE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCH
RSLRRRCQDAFGYGSKTLQRVLRLQRFLRIVRGHRNLTEAALHAGYGDAPHLVRDARQLT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHC
GLSPRALVQQHAR
CCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7517396 [H]