Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21241017
Identifier: 21241017
GI number: 21241017
Start: 291272
End: 291754
Strand: Direct
Name: 21241017
Synonym: XAC0243
Alternate gene names: NA
Gene position: 291272-291754 (Clockwise)
Preceding gene: 21241016
Following gene: 21241018
Centisome position: 5.63
GC content: 67.91
Gene sequence:
>483_bases TTGGACGCAAGCACACCGGTTGCCGGGATTGCCGCGCTGGATGCGCCACCGCGCACGCAACATTCCAGCTATCCGCCGGT GTTCGCCGCGCAGATGGGCGGCCGCCAGAAGCGCGCACTGGGCGAGGTGTTCGGGCTGCGCAACTTCGGCGTCAACCTGA CCACGCTGGCGCCGGGTGCGCGCTCGGCGCTGCGGCACGGGCATTCGCAGCAGGACGAATTCGTCTACATCGTCAGCGGC GCGCCCAGCCTGATCACCAACGCCGGCGAGCAGTTGCTGCAGCCGGGCATGTGCGTTGGCTTCCGCGCCGGTGATGGCGA TGCGCATTGCCTGATCAATCGCAGCCAGGCGGTGGTGACGTACCTGGAAGTGGGTGACCGCAGCCCCGGCGATTGCGTGA CCTATCCGGACGATGACCTGATGCTGGTCCCCATGGCGGATGGGCAGCGCGCGTACCGGCACAAGGACGGCACGCCCTAC TGA
Upstream 100 bases:
>100_bases GCCGGTGTGGAGCTGGATCAGCGGCGGCGCCGGTTCGGCCGCGCTGCTGGTCGCCTGGTTGCGGCGATAGGAGACGACCA TGTCCGACGCAACCGATGCC
Downstream 100 bases:
>100_bases GCGCGCGGGTGGTGATCCATCTGTTGGCTTTGAATGATGCACACGCCACGCCACGCTACGCGCATCGCCCGCTCTGACGC TGGCGTGGTTCGGTCGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Domain Protein; Cupin 2 Protein; Cupin Domain-Containing Protein; Transcriptional Regulator Protein; Homologue Of Hemolysin Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain-Containing Protein; Mannose-6-Phosphate Isomerase; Sugar Oxidoreductase; Hemolysin
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MDASTPVAGIAALDAPPRTQHSSYPPVFAAQMGGRQKRALGEVFGLRNFGVNLTTLAPGARSALRHGHSQQDEFVYIVSG APSLITNAGEQLLQPGMCVGFRAGDGDAHCLINRSQAVVTYLEVGDRSPGDCVTYPDDDLMLVPMADGQRAYRHKDGTPY
Sequences:
>Translated_160_residues MDASTPVAGIAALDAPPRTQHSSYPPVFAAQMGGRQKRALGEVFGLRNFGVNLTTLAPGARSALRHGHSQQDEFVYIVSG APSLITNAGEQLLQPGMCVGFRAGDGDAHCLINRSQAVVTYLEVGDRSPGDCVTYPDDDLMLVPMADGQRAYRHKDGTPY >Mature_160_residues MDASTPVAGIAALDAPPRTQHSSYPPVFAAQMGGRQKRALGEVFGLRNFGVNLTTLAPGARSALRHGHSQQDEFVYIVSG APSLITNAGEQLLQPGMCVGFRAGDGDAHCLINRSQAVVTYLEVGDRSPGDCVTYPDDDLMLVPMADGQRAYRHKDGTPY
Specific function: Unknown
COG id: COG3837
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17043; Mature: 17043
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDASTPVAGIAALDAPPRTQHSSYPPVFAAQMGGRQKRALGEVFGLRNFGVNLTTLAPGA CCCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCH RSALRHGHSQQDEFVYIVSGAPSLITNAGEQLLQPGMCVGFRAGDGDAHCLINRSQAVVT HHHHHCCCCCCCCEEEEEECCCHHHHHCCHHHHCCCCEEEEECCCCCEEEEEECCCEEEE YLEVGDRSPGDCVTYPDDDLMLVPMADGQRAYRHKDGTPY EEECCCCCCCCEEECCCCCEEEEECCCCCHHHHCCCCCCC >Mature Secondary Structure MDASTPVAGIAALDAPPRTQHSSYPPVFAAQMGGRQKRALGEVFGLRNFGVNLTTLAPGA CCCCCCCCEEEECCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCH RSALRHGHSQQDEFVYIVSGAPSLITNAGEQLLQPGMCVGFRAGDGDAHCLINRSQAVVT HHHHHCCCCCCCCEEEEEECCCHHHHHCCHHHHCCCCEEEEECCCCCEEEEEECCCEEEE YLEVGDRSPGDCVTYPDDDLMLVPMADGQRAYRHKDGTPY EEECCCCCCCCEEECCCCCEEEEECCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA