Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21241015
Identifier: 21241015
GI number: 21241015
Start: 288927
End: 289571
Strand: Direct
Name: 21241015
Synonym: XAC0241
Alternate gene names: NA
Gene position: 288927-289571 (Clockwise)
Preceding gene: 21241013
Following gene: 21241016
Centisome position: 5.58
GC content: 70.85
Gene sequence:
>645_bases ATGCCCGGATCACTCTTCAACTCCCTCAAGCCGCTCGCCGGCCAGGCCCTGCAGGCAGCGCTCAACCGTGCGCTGGCGCT GGACCCGGATACCCGCGAGGCCCTGCTGCCGCTGGAAGGCCAGCGCATCGCGTTGACCCTGGAGGCGCCTGCGCTGGCCC TGCAGATTCGCGTGCACGAGCGCCGGTTGCTGGTCGGCCCGGTCGATCAGGCACAGGAACCCGACCTGGCGGTGCGCAGC AGCCTGGCCGGCTTGCTCGGGCAACTGCCGTTTCTGGCCAATGCACGTCGCACCGGCGCGCCGGCCGGTCGGCTCAAGGT TTCCGGCGATGCCGAACTGGCGCGCCAGCTGCAGCAACTGGCCGGCCGCTTCGACCCGGATTGGCAGTTGCCGTTCGTTG CGGTGTTCGGCGACATCCTGGGCGTGCAGATCGCCGGCGCGGTGCGCGCAGCGCTGCAGCAGGCACGGCGCAGTGCGGTG GATCTGGCGCAGAGCGCGGCCGAATTCGTCACCGAAGAATCGCGCGATGTGGTGCCGCGCGCCGAGCTCGAGGCGTTCCA CGACGACGTGGACGAACTGCGCGATGACGTCGAACGGCTGGCCGCGCGCGTAAGCCGCCTGCGTGCGAGCGGAGGCGCGG CATGA
Upstream 100 bases:
>100_bases CGTGCCTAGCAACGACCGCACGACCGCTACACCGGCAGCCGGCGCACGTGCCACACCGCCGTCAAGCAGCTGCGACATGC AGGGGCGGTAGAATGCGGGC
Downstream 100 bases:
>100_bases AGGCGATCCTGCGGGCCAGCCGCATCGGCCGGGTGATCCTGCGCTATCGCCTGGACGCCTTGCTGGAAGGCACCCCGGCC GAGCGCTGGCTGCGTTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MPGSLFNSLKPLAGQALQAALNRALALDPDTREALLPLEGQRIALTLEAPALALQIRVHERRLLVGPVDQAQEPDLAVRS SLAGLLGQLPFLANARRTGAPAGRLKVSGDAELARQLQQLAGRFDPDWQLPFVAVFGDILGVQIAGAVRAALQQARRSAV DLAQSAAEFVTEESRDVVPRAELEAFHDDVDELRDDVERLAARVSRLRASGGAA
Sequences:
>Translated_214_residues MPGSLFNSLKPLAGQALQAALNRALALDPDTREALLPLEGQRIALTLEAPALALQIRVHERRLLVGPVDQAQEPDLAVRS SLAGLLGQLPFLANARRTGAPAGRLKVSGDAELARQLQQLAGRFDPDWQLPFVAVFGDILGVQIAGAVRAALQQARRSAV DLAQSAAEFVTEESRDVVPRAELEAFHDDVDELRDDVERLAARVSRLRASGGAA >Mature_213_residues PGSLFNSLKPLAGQALQAALNRALALDPDTREALLPLEGQRIALTLEAPALALQIRVHERRLLVGPVDQAQEPDLAVRSS LAGLLGQLPFLANARRTGAPAGRLKVSGDAELARQLQQLAGRFDPDWQLPFVAVFGDILGVQIAGAVRAALQQARRSAVD LAQSAAEFVTEESRDVVPRAELEAFHDDVDELRDDVERLAARVSRLRASGGAA
Specific function: Unknown
COG id: COG3165
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22885; Mature: 22754
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGSLFNSLKPLAGQALQAALNRALALDPDTREALLPLEGQRIALTLEAPALALQIRVHE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEECCEEEEEEEECC RRLLVGPVDQAQEPDLAVRSSLAGLLGQLPFLANARRTGAPAGRLKVSGDAELARQLQQL CEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCCHHHHHHHHHH AGRFDPDWQLPFVAVFGDILGVQIAGAVRAALQQARRSAVDLAQSAAEFVTEESRDVVPR HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AELEAFHDDVDELRDDVERLAARVSRLRASGGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PGSLFNSLKPLAGQALQAALNRALALDPDTREALLPLEGQRIALTLEAPALALQIRVHE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEEEEEECCEEEEEEEECC RRLLVGPVDQAQEPDLAVRSSLAGLLGQLPFLANARRTGAPAGRLKVSGDAELARQLQQL CEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCEEECCCHHHHHHHHHH AGRFDPDWQLPFVAVFGDILGVQIAGAVRAALQQARRSAVDLAQSAAEFVTEESRDVVPR HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH AELEAFHDDVDELRDDVERLAARVSRLRASGGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA