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The map label for this gene is 21241013

Identifier: 21241013

GI number: 21241013

Start: 287987

End: 288145

Strand: Direct

Name: 21241013

Synonym: XAC0239

Alternate gene names: NA

Gene position: 287987-288145 (Clockwise)

Preceding gene: 21241012

Following gene: 21241015

Centisome position: 5.56

GC content: 55.97

Gene sequence:

>159_bases
ATGCTGCATTACGCCATCATCTTCTTCGTCATCGCCATCATCGCTGCTGTGCTGGGCTTTAGCGGTATCGCCGGTGCGGC
GACCAACATCGCCTGGATCCTGTTCGTGGTGTTCCTGATCCTGGCAGTGATCTCGATGTTCCGTCGCGGCAAGGTATAA

Upstream 100 bases:

>100_bases
TCCTCATCTTCCAACGACATCGCCATCACCCGATAAAGACCGGCATATCCACAAGATACGTCTGCGCCGATTCGGCACGA
CAACTTCTGGATACCTTGCC

Downstream 100 bases:

>100_bases
CGCTTCGCTGCGATACGTCACGGCAGCGGCGCTGCCGGTTGGCGCTCACAGGGCCCGCTTCCGCAAGGACGCGGGCCCTG
TGCGTTATGGCGGAATATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MLHYAIIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV

Sequences:

>Translated_52_residues
MLHYAIIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV
>Mature_52_residues
MLHYAIIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV

Specific function: Unknown

COG id: COG5487

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0391 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y220_XANCP (Q7CLW2)

Other databases:

- EMBL:   AE008922
- RefSeq:   NP_635615.1
- GeneID:   1000451
- GenomeReviews:   AE008922_GR
- KEGG:   xcc:XCC0220
- HOGENOM:   HBG700665
- OMA:   RYAVIFF
- ProtClustDB:   PRK13682
- BioCyc:   XCAM190485:XCC0220-MONOMER
- HAMAP:   MF_01361
- InterPro:   IPR009760
- PIRSF:   PIRSF036466

Pfam domain/function: PF07043 DUF1328

EC number: NA

Molecular weight: Translated: 5640; Mature: 5640

Theoretical pI: Translated: 11.53; Mature: 11.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc0c1adc)-; HASH(0xc359534)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHYAIIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
>Mature Secondary Structure
MLHYAIIFFVIAIIAAVLGFSGIAGAATNIAWILFVVFLILAVISMFRRGKV
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12024217