| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57238142
Identifier: 57238142
GI number: 57238142
Start: 1322875
End: 1323966
Strand: Reverse
Name: 57238142
Synonym: CJE1406
Alternate gene names: NA
Gene position: 1323966-1322875 (Counterclockwise)
Preceding gene: 57238143
Following gene: 57238141
Centisome position: 74.47
GC content: 37.45
Gene sequence:
>1092_bases ATGAATTTACAACCCTTACAAATAGGAAAACATACTATAAAATATCCCATTTTTCAAGGGGGAATGGGACTAGGCATAAG CTGGGATAGATTAGCTTCTGCAGTTTCTTTAAATGGTGGACTTGGGATTATTTCTTCTGTGGGAACAGGATATTATGAAG AAAGAAAGTATGCAAGTAAAGAATTAAATGCTAAGCCTTATGGAAGTGAAAATTTTTACTCACGCAAGGGTTTGCAAGCT TTGATTAATAATGCAAGAAAAGTTTGTGGCGATGCACCTTTGGGGTGTAATATCTTATGTGCAAGTAATGATTATGCAAG AATAGCACGCGATGCTTGTGAGGTTGGTTTTAATGTGATTGTTTCAGGTGCTGGACTTCCTACAAATTTACCTGAATTTA CTGCAGATTTTCCTGATGTGGCTTTAGTGCCTATCATTTCATCTGCAAAGGCTTTAAAAATTATTTGCAAAAGATGGCAA AGCCGTTACAATCGCTTGCCTGATGCAGTGGTTTTAGAAGGGCCAAAAAGTGGAGGTCATCAAGGTTTTACTTATGAGCA GTGCTTAGATCCAAATTATCAGCTAGAAAAATTAATCGCTCCTGTGGTAGAAGAGGCTAAAAATTGGGGGTCTTTTCCCG TGATTGCTGCAGGTGGAATTTGGGATAAAAAAGATATAGAAAATGCTATTTCTTTAGGGGCTAGTGGTGTTCAAATGGGA ACGCGTTTCATAGGAACTTTTGAATGTGATGCGAGTGAAGAGTTTAAAAGCGTTTTGCTAGCTTCTAAAGAAGAAGATAT AGAGCTTATTAAATCTCCTGTGGGCTATCCTGCTCGTGGAGTTAGAACCAATCTTTTAAATTTGGTAGATAAAAGAATGG GTCCAAAGATTAATTGTATAAGCAATTGTGTAGCGCCTTGTGGACGTGGAAAAGAGGCGACTAAAGTAGGGTATTGTATA GCAGATAGGCTTTTTGATGCGTGGTCAGGCAAAAAAGAAACAGGACTTTTCTTTACAGGTGCAAATGGATATCGTTTAGA TAAGCTTATCAGTGTTAAAGAACTTATGGAAAAATTGGTTAATGGTGAATAA
Upstream 100 bases:
>100_bases TAAATTCTCAAAAAGTTAGCGACGAGCAAATGTATTTGAAACAAGGAGAATACATCTTACAAATAGGTAAAAGAAAATTT GCAAAATTAAAGGTAAAAGA
Downstream 100 bases:
>100_bases TGGCTAAAATTTTTGTATTTTTAGTATTTGCTTTCACAACTCTTTTTGGAGCTTATGAAAATGAACTTGCAAATTTTGAT AAAAATTTTATCGGTTCTAA
Product: 2-nitropropane dioxygenase family oxidoreductase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGIISSVGTGYYEERKYASKELNAKPYGSENFYSRKGLQA LINNARKVCGDAPLGCNILCASNDYARIARDACEVGFNVIVSGAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQ SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAGGIWDKKDIENAISLGASGVQMG TRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGYPARGVRTNLLNLVDKRMGPKINCISNCVAPCGRGKEATKVGYCI ADRLFDAWSGKKETGLFFTGANGYRLDKLISVKELMEKLVNGE
Sequences:
>Translated_363_residues MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGIISSVGTGYYEERKYASKELNAKPYGSENFYSRKGLQA LINNARKVCGDAPLGCNILCASNDYARIARDACEVGFNVIVSGAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQ SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAGGIWDKKDIENAISLGASGVQMG TRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGYPARGVRTNLLNLVDKRMGPKINCISNCVAPCGRGKEATKVGYCI ADRLFDAWSGKKETGLFFTGANGYRLDKLISVKELMEKLVNGE >Mature_363_residues MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGIISSVGTGYYEERKYASKELNAKPYGSENFYSRKGLQA LINNARKVCGDAPLGCNILCASNDYARIARDACEVGFNVIVSGAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQ SRYNRLPDAVVLEGPKSGGHQGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAGGIWDKKDIENAISLGASGVQMG TRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGYPARGVRTNLLNLVDKRMGPKINCISNCVAPCGRGKEATKVGYCI ADRLFDAWSGKKETGLFFTGANGYRLDKLISVKELMEKLVNGE
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 39394; Mature: 39394
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGIISSVGTGYYEERKYASK CCCCCCCCCCHHHCCCEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHH ELNAKPYGSENFYSRKGLQALINNARKVCGDAPLGCNILCASNDYARIARDACEVGFNVI HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCEEE VSGAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQSRYNRLPDAVVLEGPKSGGH EECCCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC QGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAGGIWDKKDIENAISLGASGVQMG CCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHH TRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGYPARGVRTNLLNLVDKRMGPKINCI HHEEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHH SNCVAPCGRGKEATKVGYCIADRLFDAWSGKKETGLFFTGANGYRLDKLISVKELMEKLV HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH NGE CCC >Mature Secondary Structure MNLQPLQIGKHTIKYPIFQGGMGLGISWDRLASAVSLNGGLGIISSVGTGYYEERKYASK CCCCCCCCCCHHHCCCEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHH ELNAKPYGSENFYSRKGLQALINNARKVCGDAPLGCNILCASNDYARIARDACEVGFNVI HCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCEEE VSGAGLPTNLPEFTADFPDVALVPIISSAKALKIICKRWQSRYNRLPDAVVLEGPKSGGH EECCCCCCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC QGFTYEQCLDPNYQLEKLIAPVVEEAKNWGSFPVIAAGGIWDKKDIENAISLGASGVQMG CCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCHHHHH TRFIGTFECDASEEFKSVLLASKEEDIELIKSPVGYPARGVRTNLLNLVDKRMGPKINCI HHEEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHH SNCVAPCGRGKEATKVGYCIADRLFDAWSGKKETGLFFTGANGYRLDKLISVKELMEKLV HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH NGE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA