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The map label for this gene is yebC [C]

Identifier: 57238044

GI number: 57238044

Start: 1221455

End: 1222162

Strand: Reverse

Name: yebC [C]

Synonym: CJE1306

Alternate gene names: 57238044

Gene position: 1222162-1221455 (Counterclockwise)

Preceding gene: 57238047

Following gene: 57238043

Centisome position: 68.74

GC content: 35.88

Gene sequence:

>708_bases
ATGGGACGAGCGTTTGAATACCGAAGAGCTTCTAAAGAGGCTAGATGGGATAAAATGAGTAAGCTTTTTCCTAAGCTTGC
TAAAGCCATACAAGTAGCTGCTAAAGAAGGTGGCACTGATCCTGATATGAATCCAAAATTAAGAAGTGCTATAGCTACAG
CAAAAGCAAATAATATGCCAAAAGATAATATAGATGCGGCTATTAAGCGTGCGAGTGGAAAGGATAGCGCAGATATTAAA
AACATTCATTATGAAGGAAAAGCTGCACATGGAGCTTTGGTTATAGTTGAATGTATGAGCGATAACCCTACACGCACCGT
GGCTAATGTAAAAGCTATTTTTAGTAAAAATGGTGGAGAAGTTTTGCAAAATGGATCTTTAGGCTTTATGTTTACTAGAA
AAGCGGTTTTTCATCTTGAAAAATTTGCAGGAGATTTAGAAGAATTAGAACTTGATTTGATCGATGCAGGGCTTGAAGAA
TTAGAACAAAATGAAGAAGAGTTAGTAATTAGCGGTGATTATACTGCCTTTGGTGAGCTAAGTTCTGCTATAGAAGCTAA
GGGTTTAGTTCTTAAAAAAGCAGGACTTGAGTATATACCAAACAATCCTGTAAGCTTTAGCGAAGAACAGCTTAGCGATA
TAGAAAAACTTTTAGATAAGTTAGAAGACGATGATGATGTTCAAGCTGTTTATACAAATATAGATTAA

Upstream 100 bases:

>100_bases
CTTCTCCCCAAAAATAATAAAATCATACCATTTAAAGCTTTAATTAGCCTTTTTAGTTTATACTTTTAAGTTTAAAAATC
TTTAAAGAAAGTGAGAATTT

Downstream 100 bases:

>100_bases
GGAGAAATAATGATAAAAACAATTGACACAAGCAAAGTAAACGAATATAAATTTGCTCTTATAGAAACTGAAAAAGGCAC
AATGAAACTAAAACTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMNPKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIK
NIHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGLEE
LEQNEEELVISGDYTAFGELSSAIEAKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLLDKLEDDDDVQAVYTNID

Sequences:

>Translated_235_residues
MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMNPKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIK
NIHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGLEE
LEQNEEELVISGDYTAFGELSSAIEAKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLLDKLEDDDDVQAVYTNID
>Mature_234_residues
GRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMNPKLRSAIATAKANNMPKDNIDAAIKRASGKDSADIKN
IHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGGEVLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGLEEL
EQNEEELVISGDYTAFGELSSAIEAKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLLDKLEDDDDVQAVYTNID

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=226, Percent_Identity=30.0884955752212, Blast_Score=102, Evalue=4e-22,
Organism=Escherichia coli, GI1788171, Length=231, Percent_Identity=38.0952380952381, Blast_Score=150, Evalue=5e-38,
Organism=Escherichia coli, GI1788294, Length=240, Percent_Identity=35.4166666666667, Blast_Score=127, Evalue=8e-31,
Organism=Saccharomyces cerevisiae, GI6321458, Length=260, Percent_Identity=27.3076923076923, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 25769; Mature: 25638

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMNPKLRSAIATAKANNMP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
KDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGGE
CCHHHHHHHHCCCCCCCCHHHEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCH
VLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGLEELEQNEEELVISGDYTAFGEL
HHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH
SSAIEAKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLLDKLEDDDDVQAVYTNID
HHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCC
>Mature Secondary Structure 
GRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMNPKLRSAIATAKANNMP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
KDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSKNGGE
CCHHHHHHHHCCCCCCCCHHHEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCH
VLQNGSLGFMFTRKAVFHLEKFAGDLEELELDLIDAGLEELEQNEEELVISGDYTAFGEL
HHCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH
SSAIEAKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLLDKLEDDDDVQAVYTNID
HHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA