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The map label for this gene is yjjP [H]

Identifier: 57238038

GI number: 57238038

Start: 1216680

End: 1217456

Strand: Reverse

Name: yjjP [H]

Synonym: CJE1300

Alternate gene names: 57238038

Gene position: 1217456-1216680 (Counterclockwise)

Preceding gene: 57238040

Following gene: 57238037

Centisome position: 68.48

GC content: 30.5

Gene sequence:

>777_bases
ATGGAAAAACCTGATATACAAAGATTAACTAATTTTTTAATCGTATATACTAAAACTTTGCTAGGTGCTGGAACTTATAC
AGCTAGGGTGGCAAAATGCGTAGGAAGAATAGCTGAGGTTTATGGCTATGAGATAAATATCAATTTCTTTTTTCATCATA
TTACTTTAAATGTTGTAGATATGGATGATAACTCCATTCAAAGAACTTATGTTATACCCAATCATCATGCCCATGTTAAT
TTTAAGCTTATTTTTGATTTAAGTGCTTTAAGCTGGGCTATATATGATCACAAATACGATCTTGAAAAAGCAAAAGTCGT
TTTTGAGCAAATTTCTCAACAAAAAAAGCATTCTTATTTGCTTAATCTTTTATTTGTTTCTATGGCAAATTCGGCTTTTT
GCAGGCTTTTTGGTGGTGATTTTGGTGCTGGAAATTTAGTATTTTTTGCAACTTTTGTGGGATTGTTATTAAGATATATT
TTAACTAAAGCAAAGATTGATTTAAGAATTCAATACATCCTTTGTTCTTTTATCTCATCATGGTTTGTATTTTTTGGACT
GGATATGGGATATACCAATACTTCTGATGTGGCTTTGGGTTCTAGTATCTTGTATCTTATACCAGGAGTATTTTTTATAA
ATTCTGTGATTGATATATTAAAAGATCATATTTTAATGGGGCTTAGCCGTATTATCAGCGTGGCTATTTTGATTTGTTGT
ATAGCACTTGGAATTTACATGACGCTTAGTATTTCGGATTTTGGGATTTTAAGATGA

Upstream 100 bases:

>100_bases
CATAACCTAAACCAACTATACCGATTTTTGCCATTTTTTCTCCTTATTTATTTTAAAATTTGCTATAATTATAACAAATT
CAATCAAAGATTATTAAAAT

Downstream 100 bases:

>100_bases
TTGAATTTATTTTAAGAGATATGTTTTTTGCTGCTGTGGCGGGATTTGGCTTTGCTTATGCTTGTAATCCACCTTTAAAA
ACCCTTATTTTATCTGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MEKPDIQRLTNFLIVYTKTLLGAGTYTARVAKCVGRIAEVYGYEININFFFHHITLNVVDMDDNSIQRTYVIPNHHAHVN
FKLIFDLSALSWAIYDHKYDLEKAKVVFEQISQQKKHSYLLNLLFVSMANSAFCRLFGGDFGAGNLVFFATFVGLLLRYI
LTKAKIDLRIQYILCSFISSWFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVIDILKDHILMGLSRIISVAILICC
IALGIYMTLSISDFGILR

Sequences:

>Translated_258_residues
MEKPDIQRLTNFLIVYTKTLLGAGTYTARVAKCVGRIAEVYGYEININFFFHHITLNVVDMDDNSIQRTYVIPNHHAHVN
FKLIFDLSALSWAIYDHKYDLEKAKVVFEQISQQKKHSYLLNLLFVSMANSAFCRLFGGDFGAGNLVFFATFVGLLLRYI
LTKAKIDLRIQYILCSFISSWFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVIDILKDHILMGLSRIISVAILICC
IALGIYMTLSISDFGILR
>Mature_258_residues
MEKPDIQRLTNFLIVYTKTLLGAGTYTARVAKCVGRIAEVYGYEININFFFHHITLNVVDMDDNSIQRTYVIPNHHAHVN
FKLIFDLSALSWAIYDHKYDLEKAKVVFEQISQQKKHSYLLNLLFVSMANSAFCRLFGGDFGAGNLVFFATFVGLLLRYI
LTKAKIDLRIQYILCSFISSWFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVIDILKDHILMGLSRIISVAILICC
IALGIYMTLSISDFGILR

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0108 [H]

Homologues:

Organism=Escherichia coli, GI87082435, Length=253, Percent_Identity=24.5059288537549, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 29264; Mature: 29264

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKPDIQRLTNFLIVYTKTLLGAGTYTARVAKCVGRIAEVYGYEININFFFHHITLNVVD
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEEEEEEE
MDDNSIQRTYVIPNHHAHVNFKLIFDLSALSWAIYDHKYDLEKAKVVFEQISQQKKHSYL
CCCCCCEEEEEECCCCCEEEEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LNLLFVSMANSAFCRLFGGDFGAGNLVFFATFVGLLLRYILTKAKIDLRIQYILCSFISS
HHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVIDILKDHILMGLSRIISVAILICC
HHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALGIYMTLSISDFGILR
HHHHHHHHEEECCCCCCC
>Mature Secondary Structure
MEKPDIQRLTNFLIVYTKTLLGAGTYTARVAKCVGRIAEVYGYEININFFFHHITLNVVD
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEEEEEEE
MDDNSIQRTYVIPNHHAHVNFKLIFDLSALSWAIYDHKYDLEKAKVVFEQISQQKKHSYL
CCCCCCEEEEEECCCCCEEEEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LNLLFVSMANSAFCRLFGGDFGAGNLVFFATFVGLLLRYILTKAKIDLRIQYILCSFISS
HHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFVFFGLDMGYTNTSDVALGSSILYLIPGVFFINSVIDILKDHILMGLSRIISVAILICC
HHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IALGIYMTLSISDFGILR
HHHHHHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]