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The map label for this gene is yjjB [H]

Identifier: 57238037

GI number: 57238037

Start: 1216189

End: 1216683

Strand: Reverse

Name: yjjB [H]

Synonym: CJE1299

Alternate gene names: 57238037

Gene position: 1216683-1216189 (Counterclockwise)

Preceding gene: 57238038

Following gene: 57238036

Centisome position: 68.44

GC content: 32.12

Gene sequence:

>495_bases
ATGATTGAATTTATTTTAAGAGATATGTTTTTTGCTGCTGTGGCGGGATTTGGCTTTGCTTATGCTTGTAATCCACCTTT
AAAAACCCTTATTTTATCTGCTCTTTTAGCGGCAATTGCACATGGGCTTCGTTTTACCTTGGTGGAATATTTTCATTTTC
AAACTTTAGCAATTGCAACTTTTGTTGCTTCATTTTGCATAGGATGTTTAGGAATTGTTTTAGCAAAAATCATCAAAACT
CCTGCTGAAATTATCGCTTTCCCTGCTCTTATTCCTATGATACCTGGAATTTATGCTTATAAAGCGATTTTGTATCTTAT
TTCTTTTATACGCAGTGATGATTTGAAGGCTAAGTCTGAATTTTTAGTTCAATTTTTTGATTATTTTTTTACAACTGTTT
CTGTGACTTTGGCTCTAGCTATAGGAGTGAGTGTTACCTTGCTTATATTTTTTGAACAAAGTTTTATGATGACTAGACAT
GCAAAAAAACATTAA

Upstream 100 bases:

>100_bases
TAATGGGGCTTAGCCGTATTATCAGCGTGGCTATTTTGATTTGTTGTATAGCACTTGGAATTTACATGACGCTTAGTATT
TCGGATTTTGGGATTTTAAG

Downstream 100 bases:

>100_bases
AACTTGTTGTAAATTTGTTTAATATTTCTTTTTATAATTTTAAATCAAAAATTTAAAAAAAGGTATTGTATGTTATGTCC
AGTTTGTAATGTAGATTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLRFTLVEYFHFQTLAIATFVASFCIGCLGIVLAKIIKT
PAEIIAFPALIPMIPGIYAYKAILYLISFIRSDDLKAKSEFLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRH
AKKH

Sequences:

>Translated_164_residues
MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLRFTLVEYFHFQTLAIATFVASFCIGCLGIVLAKIIKT
PAEIIAFPALIPMIPGIYAYKAILYLISFIRSDDLKAKSEFLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRH
AKKH
>Mature_164_residues
MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLRFTLVEYFHFQTLAIATFVASFCIGCLGIVLAKIIKT
PAEIIAFPALIPMIPGIYAYKAILYLISFIRSDDLKAKSEFLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRH
AKKH

Specific function: Unknown

COG id: COG3610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0442 family [H]

Homologues:

Organism=Escherichia coli, GI145693219, Length=155, Percent_Identity=32.9032258064516, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619
- InterPro:   IPR020914 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 18268; Mature: 18268

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLRFTLVEYFHFQTLAIAT
CHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVASFCIGCLGIVLAKIIKTPAEIIAFPALIPMIPGIYAYKAILYLISFIRSDDLKAKSE
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHH
FLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRHAKKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEFILRDMFFAAVAGFGFAYACNPPLKTLILSALLAAIAHGLRFTLVEYFHFQTLAIAT
CHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVASFCIGCLGIVLAKIIKTPAEIIAFPALIPMIPGIYAYKAILYLISFIRSDDLKAKSE
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHH
FLVQFFDYFFTTVSVTLALAIGVSVTLLIFFEQSFMMTRHAKKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA