| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57238020
Identifier: 57238020
GI number: 57238020
Start: 1199095
End: 1199982
Strand: Reverse
Name: 57238020
Synonym: CJE1281
Alternate gene names: NA
Gene position: 1199982-1199095 (Counterclockwise)
Preceding gene: 57238021
Following gene: 57238019
Centisome position: 67.5
GC content: 26.13
Gene sequence:
>888_bases ATGACTGAAATTTCAAGTTTTTGGTATACTCCTAAAGGCTATAAGGGTATAGGTTTAATGGAAATTCTTACGATTAAATC TTGGCTTGATCATGGGTATAAATTCCATCTATATACTTATAATTTAGAAGATAAAATTTTTTTAAAATTCCAAGAGCTGT TTGATAATTTTATACTTAAAGATGCAAATGAAATCATACCTTTTGAAGAATATTTTAGCGATGATAGGGGAGCTGGAGTA GCTGCTTTTTCAGATTTTTTTAGGTTTAATCTACTTTATCTCAGGGGGGGGGTATGGGTGGATCTTGATATGGTGTGTTT AAACCATTATGATTATGATAAAAAAGAATATATTTTTTCTAAGGAAATTGATAATGATCTAAGCAAAGCTAGAATCACAA CTTCACTCCTTAAATTTCCAAAACAAAGTGAATTTGGAAAATTAATTATAGATGAAGCAAAAAAGATTGTTGATGATAAC AAAATAATTCCTTGGGGTATTATAGGTCCTTGGTTTTTAGCTAAATGGGTTAAAGAATATGATTTAGAAAAACATGCTCT AGACTATAAAGATACTTGTCAAATTTCTTGTGGTAATACTAGAGATTTTATAGATAAAAAAATTTTCGATAAAAACAGAC TTTGTTTGCATTTATTTTCTGAAATGTGGAAAATTTATAAAATGAATAAAAATCATTTTTATAAATCATGCATTTATGGA TTTTTACTTCAAAAGCACAATATCCTTGATTTATGTCTTAAATTAAATTATAATCTTAGTTTTTGCGATAAACATTATGA TAAATTCCTTCCTTTTATTAATATAAAAAATAAAATAAGATTTTATTTTCGCCACCCAAAAAAGATTTTTAAGAAAAACA ATGCCTAA
Upstream 100 bases:
>100_bases TTGAGGTTTTAAAGAAAGAAGAGATGGATTTAAAAAATAGAATTTAAGATTAGATTTTATATAATTAAGTTTTTATATTT TTAATATTAAAAGGCTAACA
Downstream 100 bases:
>100_bases AATTTCAATCATCTTGCCAACTTTTAATGTAGAAAAATATATAGCCAAAGCTTTAGAAAGTTGTATCAATCAAAGTTTTA AAGATATAGAAATAATTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTEISSFWYTPKGYKGIGLMEILTIKSWLDHGYKFHLYTYNLEDKIFLKFQELFDNFILKDANEIIPFEEYFSDDRGAGV AAFSDFFRFNLLYLRGGVWVDLDMVCLNHYDYDKKEYIFSKEIDNDLSKARITTSLLKFPKQSEFGKLIIDEAKKIVDDN KIIPWGIIGPWFLAKWVKEYDLEKHALDYKDTCQISCGNTRDFIDKKIFDKNRLCLHLFSEMWKIYKMNKNHFYKSCIYG FLLQKHNILDLCLKLNYNLSFCDKHYDKFLPFINIKNKIRFYFRHPKKIFKKNNA
Sequences:
>Translated_295_residues MTEISSFWYTPKGYKGIGLMEILTIKSWLDHGYKFHLYTYNLEDKIFLKFQELFDNFILKDANEIIPFEEYFSDDRGAGV AAFSDFFRFNLLYLRGGVWVDLDMVCLNHYDYDKKEYIFSKEIDNDLSKARITTSLLKFPKQSEFGKLIIDEAKKIVDDN KIIPWGIIGPWFLAKWVKEYDLEKHALDYKDTCQISCGNTRDFIDKKIFDKNRLCLHLFSEMWKIYKMNKNHFYKSCIYG FLLQKHNILDLCLKLNYNLSFCDKHYDKFLPFINIKNKIRFYFRHPKKIFKKNNA >Mature_294_residues TEISSFWYTPKGYKGIGLMEILTIKSWLDHGYKFHLYTYNLEDKIFLKFQELFDNFILKDANEIIPFEEYFSDDRGAGVA AFSDFFRFNLLYLRGGVWVDLDMVCLNHYDYDKKEYIFSKEIDNDLSKARITTSLLKFPKQSEFGKLIIDEAKKIVDDNK IIPWGIIGPWFLAKWVKEYDLEKHALDYKDTCQISCGNTRDFIDKKIFDKNRLCLHLFSEMWKIYKMNKNHFYKSCIYGF LLQKHNILDLCLKLNYNLSFCDKHYDKFLPFINIKNKIRFYFRHPKKIFKKNNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35490; Mature: 35358
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEISSFWYTPKGYKGIGLMEILTIKSWLDHGYKFHLYTYNLEDKIFLKFQELFDNFILK CCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHH DANEIIPFEEYFSDDRGAGVAAFSDFFRFNLLYLRGGVWVDLDMVCLNHYDYDKKEYIFS CHHHCCCHHHHHCCCCCCCHHHHHHHHHHEEHEEECCEEEEHHHHHHCCCCCCHHHHHHH KEIDNDLSKARITTSLLKFPKQSEFGKLIIDEAKKIVDDNKIIPWGIIGPWFLAKWVKEY HHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH DLEKHALDYKDTCQISCGNTRDFIDKKIFDKNRLCLHLFSEMWKIYKMNKNHFYKSCIYG CCHHHCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH FLLQKHNILDLCLKLNYNLSFCDKHYDKFLPFINIKNKIRFYFRHPKKIFKKNNA HHHHCCCHHHHHHHHCCCEEHHHHHHHHHCCCEECCCEEEEEEECCHHHHCCCCC >Mature Secondary Structure TEISSFWYTPKGYKGIGLMEILTIKSWLDHGYKFHLYTYNLEDKIFLKFQELFDNFILK CCCCCEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHHHH DANEIIPFEEYFSDDRGAGVAAFSDFFRFNLLYLRGGVWVDLDMVCLNHYDYDKKEYIFS CHHHCCCHHHHHCCCCCCCHHHHHHHHHHEEHEEECCEEEEHHHHHHCCCCCCHHHHHHH KEIDNDLSKARITTSLLKFPKQSEFGKLIIDEAKKIVDDNKIIPWGIIGPWFLAKWVKEY HHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH DLEKHALDYKDTCQISCGNTRDFIDKKIFDKNRLCLHLFSEMWKIYKMNKNHFYKSCIYG CCHHHCCCCCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH FLLQKHNILDLCLKLNYNLSFCDKHYDKFLPFINIKNKIRFYFRHPKKIFKKNNA HHHHCCCHHHHHHHHCCCEEHHHHHHHHHCCCEECCCEEEEEEECCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA