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The map label for this gene is waaV [H]

Identifier: 57238021

GI number: 57238021

Start: 1200036

End: 1200845

Strand: Reverse

Name: waaV [H]

Synonym: CJE1282

Alternate gene names: 57238021

Gene position: 1200845-1200036 (Counterclockwise)

Preceding gene: 57238023

Following gene: 57238020

Centisome position: 67.55

GC content: 25.8

Gene sequence:

>810_bases
ATGCCACAACTTTCTATCATAATCCCGCTTTTTAATTCTTGCGATTTTATCTCAAGAGCTTTACAAAGTTGTATAAATCA
GACTTTAAAAGATATTGAAATTTTGATTATCGATGATAAAAGTAAAGATAATAGTTTAAATATGGTTTTAGAATTTGCCA
AAAAAGATCCAAGGATAAAAATCTTTCAAAATGAAGAAAATTTAGGCACTTTTGCAAGTAGAAATTTGGGGGTTTTGCAT
TCTAGTTCTGATTTTATAATGTTTTTAGATAGTGATGATTTTTTAACACTCGATGCTTGTGAAATAACATTTAAAGAGAT
GAAAAAAGGTTTTGATTTGCTTTGTTTTGATGCCTTTGTGCATAGAGTAAAAACCAAACAATTTTATCGTTTTAAACAAG
ATGAAGTTTTTAATCAAAAGGAATTTTTAGATTTTTTAAGCAAACAAAGGCATTTTTGCTGGTCGGTTTGGGCGAAGTGC
TTTAGAAAAGATATCATCTTAAAAAGTTTTGAGAAAATTAAAATAGATGAGCGTTTAAGTTATGGCGAAGATGTGCTTTT
TTGTTATGTTTATTTTATGTTTTGTGAGAAAATAGCTGTTTTTAAAACTTGCATTTATCATTATGAATTTAATCCAAATG
GAAGATATGAGAATAAAAATAAAGAAATTTTAAATCAAAATTATTATGATAAAAAGAAAAGTAATGAACTTATAAGAAAG
CTTTCTTTAGACTTTGAAAATGATACCTTTCATCAAAAGCTATTTGAGGTTTTAAAGAAAGAAGAGATGGATTTAAAAAA
TAGAATTTAA

Upstream 100 bases:

>100_bases
CGCATCGCCTAGCCAAGTGGGAAGGTGTATAAAAATTTTCATAAATTTCCTAAACTTTGATAGAATTGTTTTTATTATTT
TAACAAAATTTAGGAAAAAT

Downstream 100 bases:

>100_bases
GATTAGATTTTATATAATTAAGTTTTTATATTTTTAATATTAAAAGGCTAACAATGACTGAAATTTCAAGTTTTTGGTAT
ACTCCTAAAGGCTATAAGGG

Product: lipooligosaccharide biosynthesis glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MPQLSIIIPLFNSCDFISRALQSCINQTLKDIEILIIDDKSKDNSLNMVLEFAKKDPRIKIFQNEENLGTFASRNLGVLH
SSSDFIMFLDSDDFLTLDACEITFKEMKKGFDLLCFDAFVHRVKTKQFYRFKQDEVFNQKEFLDFLSKQRHFCWSVWAKC
FRKDIILKSFEKIKIDERLSYGEDVLFCYVYFMFCEKIAVFKTCIYHYEFNPNGRYENKNKEILNQNYYDKKKSNELIRK
LSLDFENDTFHQKLFEVLKKEEMDLKNRI

Sequences:

>Translated_269_residues
MPQLSIIIPLFNSCDFISRALQSCINQTLKDIEILIIDDKSKDNSLNMVLEFAKKDPRIKIFQNEENLGTFASRNLGVLH
SSSDFIMFLDSDDFLTLDACEITFKEMKKGFDLLCFDAFVHRVKTKQFYRFKQDEVFNQKEFLDFLSKQRHFCWSVWAKC
FRKDIILKSFEKIKIDERLSYGEDVLFCYVYFMFCEKIAVFKTCIYHYEFNPNGRYENKNKEILNQNYYDKKKSNELIRK
LSLDFENDTFHQKLFEVLKKEEMDLKNRI
>Mature_268_residues
PQLSIIIPLFNSCDFISRALQSCINQTLKDIEILIIDDKSKDNSLNMVLEFAKKDPRIKIFQNEENLGTFASRNLGVLHS
SSDFIMFLDSDDFLTLDACEITFKEMKKGFDLLCFDAFVHRVKTKQFYRFKQDEVFNQKEFLDFLSKQRHFCWSVWAKCF
RKDIILKSFEKIKIDERLSYGEDVLFCYVYFMFCEKIAVFKTCIYHYEFNPNGRYENKNKEILNQNYYDKKKSNELIRKL
SLDFENDTFHQKLFEVLKKEEMDLKNRI

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=289, Percent_Identity=25.9515570934256, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 32304; Mature: 32172

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLSIIIPLFNSCDFISRALQSCINQTLKDIEILIIDDKSKDNSLNMVLEFAKKDPRIK
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCCEE
IFQNEENLGTFASRNLGVLHSSSDFIMFLDSDDFLTLDACEITFKEMKKGFDLLCFDAFV
EEECCCCCCHHHCCCCEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCHHHHHHH
HRVKTKQFYRFKQDEVFNQKEFLDFLSKQRHFCWSVWAKCFRKDIILKSFEKIKIDERLS
HHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
YGEDVLFCYVYFMFCEKIAVFKTCIYHYEFNPNGRYENKNKEILNQNYYDKKKSNELIRK
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHH
LSLDFENDTFHQKLFEVLKKEEMDLKNRI
HHCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQLSIIIPLFNSCDFISRALQSCINQTLKDIEILIIDDKSKDNSLNMVLEFAKKDPRIK
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHCCCCCEE
IFQNEENLGTFASRNLGVLHSSSDFIMFLDSDDFLTLDACEITFKEMKKGFDLLCFDAFV
EEECCCCCCHHHCCCCEEEECCCCEEEEECCCCEEEEHHHHHHHHHHHCCCCCHHHHHHH
HRVKTKQFYRFKQDEVFNQKEFLDFLSKQRHFCWSVWAKCFRKDIILKSFEKIKIDERLS
HHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
YGEDVLFCYVYFMFCEKIAVFKTCIYHYEFNPNGRYENKNKEILNQNYYDKKKSNELIRK
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHCCCCCCHHHHHHHHHH
LSLDFENDTFHQKLFEVLKKEEMDLKNRI
HHCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]