| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is wlaX
Identifier: 57238013
GI number: 57238013
Start: 1191683
End: 1192477
Strand: Reverse
Name: wlaX
Synonym: CJE1274
Alternate gene names: NA
Gene position: 1192477-1191683 (Counterclockwise)
Preceding gene: 57238017
Following gene: 57238012
Centisome position: 67.07
GC content: 29.43
Gene sequence:
>795_bases ATGGCAAAAAATGAAGGTTATATTTGTGTTTTTGATTGTGAGAGTGTGCCAGATGTTGAGCTTATCCGCAAAACTTTAGG TTTTGAAGGAAGTGATTTAGAGGTAAGTTTAAAAGCACTTCAGTGGCAAAAAGAACAAAGTGGGAGTGAGTTTTTGCCTT TGCCTTATCATAAAATTATCAGTATTTGTGCGGTTTTAAGTGATAATTTTGGAAAATTTATCAAAGTAAATAAAATTGAT GGGCAAAATGAAAAAGAAATGATTGAGAATTTTTTCAATTTTATAGAAAATTATGAGCCAAAATTAGTCAGCTTTAATGG TAAAAATTTCGATATGCCTGTTCTTGTTTTAAGGGCTTTAAAATACAATTTAAAAGCAGCAACTTATTTAGATACTCAAA GCGATAAATGGAATAATTATAAAACAAGATTTTCAGAATTAAAACATTGTGATTTATTAGAATCCTTAGGATCTAATGGG CGTGGAATAAAGCTTGATACACTTTGCTCTATGGTGGGTTTGCCAGGAAAATATGATGTGCATGGCGATGAGGTGATGAA ACTTTTTTATGAAAATGAACTTGAAAAAATTCACGAATATTGTGAAAGTGATGTTTTAAACACCTATATGCTTTTTTTAA AATATGAACTTATTAAAGCTAATGTTAGTGAAGAAGATTATGTTGATTTTCTTTCTTATATGAGAGATTTTTTGCGTGAA AAAAAATCAGATCGTTCCTATACAGAAGTTTTTGCAAAAGCTTGTGAGAGTGAAATTTCAAAAGTTCAATCTTAA
Upstream 100 bases:
>100_bases CAAGTGCTGACAAACGAACAATTGCTATTTTCATTAAAAGCCTAATATTTTAAAATTTTTGCTATGATTTTAGCGAAATT ATTTAAAAAAAGGTTAAAAA
Downstream 100 bases:
>100_bases GTATTTAAGAAAATATATTAAAATTTATTTTTGACATTTTTTAAAAAAAGGAATGATGATGAAAATTCTTATTAGCGGTG GTGCAGGTTATATAGGTTCT
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Polysaccharide Biosynthesis Protein; 3-5' Exonuclease PolB-Like Protein; Propable PolB; Polysaccharide Biosynthesis Protein WlaX; Lipoprotein SmpA/OmlA Family; 3&Apos; Large-Conductance Mechanosensitive Channel
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQKEQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKID GQNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNG RGIKLDTLCSMVGLPGKYDVHGDEVMKLFYENELEKIHEYCESDVLNTYMLFLKYELIKANVSEEDYVDFLSYMRDFLRE KKSDRSYTEVFAKACESEISKVQS
Sequences:
>Translated_264_residues MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQKEQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKID GQNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNG RGIKLDTLCSMVGLPGKYDVHGDEVMKLFYENELEKIHEYCESDVLNTYMLFLKYELIKANVSEEDYVDFLSYMRDFLRE KKSDRSYTEVFAKACESEISKVQS >Mature_263_residues AKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQKEQSGSEFLPLPYHKIISICAVLSDNFGKFIKVNKIDG QNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRALKYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNGR GIKLDTLCSMVGLPGKYDVHGDEVMKLFYENELEKIHEYCESDVLNTYMLFLKYELIKANVSEEDYVDFLSYMRDFLREK KSDRSYTEVFAKACESEISKVQS
Specific function: Unknown
COG id: COG3298
COG function: function code L; Predicted 3'-5' exonuclease related to the exonuclease domain of PolB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30620; Mature: 30489
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQKEQSGSEFLPLPYHKII CCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH SICAVLSDNFGKFIKVNKIDGQNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRAL HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH KYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNGRGIKLDTLCSMVGLPGKYDV HHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCC HGDEVMKLFYENELEKIHEYCESDVLNTYMLFLKYELIKANVSEEDYVDFLSYMRDFLRE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KKSDRSYTEVFAKACESEISKVQS HCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AKNEGYICVFDCESVPDVELIRKTLGFEGSDLEVSLKALQWQKEQSGSEFLPLPYHKII CCCCCCEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH SICAVLSDNFGKFIKVNKIDGQNEKEMIENFFNFIENYEPKLVSFNGKNFDMPVLVLRAL HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHH KYNLKAATYLDTQSDKWNNYKTRFSELKHCDLLESLGSNGRGIKLDTLCSMVGLPGKYDV HHCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCC HGDEVMKLFYENELEKIHEYCESDVLNTYMLFLKYELIKANVSEEDYVDFLSYMRDFLRE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH KKSDRSYTEVFAKACESEISKVQS HCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA