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The map label for this gene is pglD [H]

Identifier: 57238004

GI number: 57238004

Start: 1181410

End: 1182021

Strand: Reverse

Name: pglD [H]

Synonym: CJE1265

Alternate gene names: 57238004

Gene position: 1182021-1181410 (Counterclockwise)

Preceding gene: 57238005

Following gene: 57238003

Centisome position: 66.49

GC content: 30.56

Gene sequence:

>612_bases
ATGTTACAACAGAGAAATTTAATGGCAAGAACTGAAAAAATTTATATTTATGGTGCTAGTGGTCATGGACTTGTTTGTGA
AGATGTGGCTAAAAATATGGGTTATAAAGAATGTATTTTTTTAGATGATTTTAAAGGAATGAAATTTGAAAGTACCTTAC
CTAAATATGATTTTTTTATAGCCATAGGAAACAATGAAATTCGAAAAAAGATTTATCAAAAAATTTCAGAAAATGGCTTT
AAAATTGTCAATCTTATCCATAAAAGTGCACTTATAAGTCCTAGCGCAATCGTGGAAGAAAGTGCAGGAATTTTAATCAT
GCCTTATGTAGTGATTAACGCTAAAGCTAAAATAGAAAAAGGTGTGATTTTAAATACTTCAAGCGTAATTGAGCATGAAT
GTGTGATAGGGGAATTTTCTCATGTGAGTGTGGGAGCTAAATGTGCGGGTAACGTAAAAATTGGTAAAAATTGTTTTTTA
GGGATTAATTCTTGTGTTTTGCCTAATTTAAGTTTGGCAGATGATAGTATTTTAGGTGGTGGAGCAACTTTAGTTAAAAA
TCAAGATGAAAAAGGTGTTTTTGTGGGAGTACCTGCAAAAAGAAAAATATGA

Upstream 100 bases:

>100_bases
GTGTATTATGTGAAAAATATTTCTTTTTTGCTTGATTTAAAAATCATGTTTTTAACAGCTTTAAAGGTTTTAAAACGAAG
CGGGGTAAGCAAAGAAGGCC

Downstream 100 bases:

>100_bases
AATGATTATAAAAAGATTTTTGTTTGATTCTTTGTAAATTTTTTTAGGTAAAATAGAGTCAATTTATAAAAATTTTGTTT
TACACAAAGGATAAATCATG

Product: general glycosylation pathway protein

Products: cofactor [C]

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLQQRNLMARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDFFIAIGNNEIRKKIYQKISENGF
KIVNLIHKSALISPSAIVEESAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFL
GINSCVLPNLSLADDSILGGGATLVKNQDEKGVFVGVPAKRKI

Sequences:

>Translated_203_residues
MLQQRNLMARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDFFIAIGNNEIRKKIYQKISENGF
KIVNLIHKSALISPSAIVEESAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFL
GINSCVLPNLSLADDSILGGGATLVKNQDEKGVFVGVPAKRKI
>Mature_203_residues
MLQQRNLMARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDFFIAIGNNEIRKKIYQKISENGF
KIVNLIHKSALISPSAIVEESAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFL
GINSCVLPNLSLADDSILGGGATLVKNQDEKGVFVGVPAKRKI

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0110

COG function: function code R; Acetyltransferase (isoleucine patch superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018357
- InterPro:   IPR013817
- InterPro:   IPR020019
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22115; Mature: 22115

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQQRNLMARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDFFI
CCCCCCCCEEEEEEEEEECCCCCEEHHHHHHCCCCEEEEEEECCCCCEECCCCCCEEEEE
AIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEESAGILIMPYVVINAKAKIEK
EECCHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCHHHHHCCCCEEEEEEEEEECCEEECC
GVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGG
CEEEECHHHHHHHEEECCCCCEEECCEECCCEEECCEEEEECCHHHCCCCCCCCCCEECC
GATLVKNQDEKGVFVGVPAKRKI
CEEEEECCCCCCEEEECCCCCCC
>Mature Secondary Structure
MLQQRNLMARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDDFKGMKFESTLPKYDFFI
CCCCCCCCEEEEEEEEEECCCCCEEHHHHHHCCCCEEEEEEECCCCCEECCCCCCEEEEE
AIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEESAGILIMPYVVINAKAKIEK
EECCHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCHHHHHCCCCEEEEEEEEEECCEEECC
GVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGG
CEEEECHHHHHHHEEECCCCCEEECCEECCCEEECCEEEEECCHHHCCCCCCCCCCEECC
GATLVKNQDEKGVFVGVPAKRKI
CEEEEECCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: pre-cofactor [C]

Specific reaction: pre-cofactor = cofactor [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]