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The map label for this gene is pglC [H]

Identifier: 57238005

GI number: 57238005

Start: 1181987

End: 1182589

Strand: Reverse

Name: pglC [H]

Synonym: CJE1266

Alternate gene names: 57238005

Gene position: 1182589-1181987 (Counterclockwise)

Preceding gene: 57238006

Following gene: 57238004

Centisome position: 66.52

GC content: 31.84

Gene sequence:

>603_bases
ATGTATGAAAAAGTTTTTAAAAGAATTTTTGATTTTATTTTAGCTTTAGTGTTTTTAGTACTCTTTTCTCCGGTGATTTT
AATCACTGCTTTACTTTTAAAAATCACTCAAGGAAGTGTGATTTTTACCCAAAATCGCCCCGGGTTAGATGAAAAAATTT
TTAAAATTTATAAATTTAAAACCATGAGCGATGAAAGAGATGAAAAGGGTGAGTTATTAAGCGATGAGCTTCGCTTAAAA
GCTTTTGGAAAAATTGTTAGAAGCTTAAGCTTGGATGAGCTTTTACAACTTTTTAATGTCTTAAAAGGGGATATGAGTTT
TGTGGGACCTAGACCTCTTTTAGTAGAGTATTTATCCTTTTATAATGAAGAGCAAAAATTGCGTCATAAAGTGCGTCCAG
GTATAACAGGGTGGGCGCAGGTAAATGGTAGAAATGCTATTTCTTGGCAGAAAAAATTCGAACTTGATGTGTATTATGTG
AAAAATATTTCTTTTTTGCTTGATTTAAAAATCATGTTTTTAACAGCTTTAAAGGTTTTAAAACGAAGCGGGGTAAGCAA
AGAAGGCCATGTTACAACAGAGAAATTTAATGGCAAGAACTGA

Upstream 100 bases:

>100_bases
AGATTAAATTTAGCTAAAAATGCCGCCCAAGATGCTTTGCAATACGATGAAAATAATATCGCACAGCGTTATTTAAAACT
TTATGATAGGGTAATTAAGA

Downstream 100 bases:

>100_bases
AAAAATTTATATTTATGGTGCTAGTGGTCATGGACTTGTTTGTGAAGATGTGGCTAAAAATATGGGTTATAAAGAATGTA
TTTTTTTAGATGATTTTAAA

Product: general glycosylation pathway protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MYEKVFKRIFDFILALVFLVLFSPVILITALLLKITQGSVIFTQNRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLK
AFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLSFYNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN

Sequences:

>Translated_200_residues
MYEKVFKRIFDFILALVFLVLFSPVILITALLLKITQGSVIFTQNRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLK
AFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLSFYNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN
>Mature_200_residues
MYEKVFKRIFDFILALVFLVLFSPVILITALLLKITQGSVIFTQNRPGLDEKIFKIYKFKTMSDERDEKGELLSDELRLK
AFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLSFYNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYV
KNISFLLDLKIMFLTALKVLKRSGVSKEGHVTTEKFNGKN

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=187, Percent_Identity=41.1764705882353, Blast_Score=135, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 23204; Mature: 23204

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEKVFKRIFDFILALVFLVLFSPVILITALLLKITQGSVIFTQNRPGLDEKIFKIYKFK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
TMSDERDEKGELLSDELRLKAFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLSF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
YNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL
HCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHH
KRSGVSKEGHVTTEKFNGKN
HHCCCCCCCCEECCCCCCCC
>Mature Secondary Structure
MYEKVFKRIFDFILALVFLVLFSPVILITALLLKITQGSVIFTQNRPGLDEKIFKIYKFK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHH
TMSDERDEKGELLSDELRLKAFGKIVRSLSLDELLQLFNVLKGDMSFVGPRPLLVEYLSF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
YNEEQKLRHKVRPGITGWAQVNGRNAISWQKKFELDVYYVKNISFLLDLKIMFLTALKVL
HCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHH
KRSGVSKEGHVTTEKFNGKN
HHCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]