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The map label for this gene is yebA [C]

Identifier: 57237969

GI number: 57237969

Start: 1145246

End: 1146148

Strand: Reverse

Name: yebA [C]

Synonym: CJE1230

Alternate gene names: 57237969

Gene position: 1146148-1145246 (Counterclockwise)

Preceding gene: 57237970

Following gene: 57237968

Centisome position: 64.47

GC content: 32.23

Gene sequence:

>903_bases
GTGGTAAAAAATAAATTCACTATTACCATTACAGATATTAACGGTTCAAGACATTTTTATTTAAATCAAATAATCAAAAA
AATAGTTTTTTATACTATTGCTTTTATTGTTTTATTTTTAGTTTTTAGTGGTTTTTATATCAAATATCTCGATAGCAAAC
TTAGCGATATCAGTGAAAAGCGTGAGGAGCTTTTGAAAAAAAGCAAAGAATTGGAATTATCTAATTCGCAAATGCAAAAA
AGCATAGAAGAAAAAACTCAGCAGTATGCAGCTATAGAAGATAAAATAGCTTCTTTTGAAGAGGCTTTGGGCTTAGAAGT
AGAAAATAATCTTACAATTAGTGCAAGACTTGATAATCTTCAGCTTACCAATGAGCAGCAACTTGGAATTTTGGGACAAA
TTCCTAATGGATGGCCTATTGAAAATAAAGGCATTACAGGAAATTTTGGCTGGAGAGAGCATCCGCTTTTAAAAAGAAGG
GAATTTCATCCTGGTATTGATTTAAGAGCAGAAATTGGTACCCCTATTTATGCACCAGCAAGTGGAGTAGTCGAATTTTC
AGGTTATAGTGATAATGGCTATGGCTATAATGTAATTTTATTGCATAATTTTGGTTTTAAAACAGTATTTGCTCATATGA
TGCGCAAAGAAGTGGTCAAAGCAGGTCAATTTGTTAATAAAGGGCAGTTGATAGGTTATAGTGGTAATACAGGTCTTTCT
ACGGGGCCGCATTTGCACTATGAGGTAAGGTTTATTAATAAAACTTTAGAACCTTTGTATTTTTTAAATTTGCAAAGAAA
AAATATGAATGATTTTTTTAATCAAGAAAGGAGAGTTCCATGGCAATCTTTAATAAAGGCGGTATCAGCCCAACATCCAG
CTCTAGCTCAGAAACAACAGTAA

Upstream 100 bases:

>100_bases
CTAGGTATACAATGCAAAGAATTTGTAAAATTAGAAGAGAATAAAAAAAATCTAGTTTTTGGTTCTTTTATGCTGGTAGA
AAATTTTTTAAAGGAGTGGT

Downstream 100 bases:

>100_bases
TTTCTTCAGGTGCGAGAATTGAGGGTAAATTTTATTTTGCTTCTATGCTCCATGTTGATGGAGAGTTAAGTGGCATTATT
CATTCTGAAAGTATTGTGGT

Product: M24/M37 family peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MVKNKFTITITDINGSRHFYLNQIIKKIVFYTIAFIVLFLVFSGFYIKYLDSKLSDISEKREELLKKSKELELSNSQMQK
SIEEKTQQYAAIEDKIASFEEALGLEVENNLTISARLDNLQLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRR
EFHPGIDLRAEIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEVVKAGQFVNKGQLIGYSGNTGLS
TGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQERRVPWQSLIKAVSAQHPALAQKQQ

Sequences:

>Translated_300_residues
MVKNKFTITITDINGSRHFYLNQIIKKIVFYTIAFIVLFLVFSGFYIKYLDSKLSDISEKREELLKKSKELELSNSQMQK
SIEEKTQQYAAIEDKIASFEEALGLEVENNLTISARLDNLQLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRR
EFHPGIDLRAEIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEVVKAGQFVNKGQLIGYSGNTGLS
TGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQERRVPWQSLIKAVSAQHPALAQKQQ
>Mature_300_residues
MVKNKFTITITDINGSRHFYLNQIIKKIVFYTIAFIVLFLVFSGFYIKYLDSKLSDISEKREELLKKSKELELSNSQMQK
SIEEKTQQYAAIEDKIASFEEALGLEVENNLTISARLDNLQLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRR
EFHPGIDLRAEIGTPIYAPASGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEVVKAGQFVNKGQLIGYSGNTGLS
TGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQERRVPWQSLIKAVSAQHPALAQKQQ

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=116, Percent_Identity=40.5172413793103, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789099, Length=125, Percent_Identity=35.2, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 34369; Mature: 34369

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNKFTITITDINGSRHFYLNQIIKKIVFYTIAFIVLFLVFSGFYIKYLDSKLSDISEK
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REELLKKSKELELSNSQMQKSIEEKTQQYAAIEDKIASFEEALGLEVENNLTISARLDNL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEEEEECCE
QLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRREFHPGIDLRAEIGTPIYAPA
EECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCEECCC
SGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEVVKAGQFVNKGQLIGYSGNTGLS
CCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
TGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQERRVPWQSLIKAVSAQHPALAQKQQ
CCCCEEEEEEEECHHHCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MVKNKFTITITDINGSRHFYLNQIIKKIVFYTIAFIVLFLVFSGFYIKYLDSKLSDISEK
CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REELLKKSKELELSNSQMQKSIEEKTQQYAAIEDKIASFEEALGLEVENNLTISARLDNL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCEEEEEEECCE
QLTNEQQLGILGQIPNGWPIENKGITGNFGWREHPLLKRREFHPGIDLRAEIGTPIYAPA
EECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCEECCC
SGVVEFSGYSDNGYGYNVILLHNFGFKTVFAHMMRKEVVKAGQFVNKGQLIGYSGNTGLS
CCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
TGPHLHYEVRFINKTLEPLYFLNLQRKNMNDFFNQERRVPWQSLIKAVSAQHPALAQKQQ
CCCCEEEEEEEECHHHCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]