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The map label for this gene is 57237965

Identifier: 57237965

GI number: 57237965

Start: 1140532

End: 1141218

Strand: Reverse

Name: 57237965

Synonym: CJE1226

Alternate gene names: NA

Gene position: 1141218-1140532 (Counterclockwise)

Preceding gene: 57237966

Following gene: 57237964

Centisome position: 64.19

GC content: 26.93

Gene sequence:

>687_bases
ATGACTGGAGCACAAATTTTTACCAAGCTTTTAAATTTGGATTTAAATTATCATGATTTTGATTGGCTTGAAAATCAAGG
ATTGAGTGAATTTGAGCTTTTAATTTCTGTCGTTTTAACTCAAAATACAAATTGGAAAAATGTCTTAAAAGCTTTAGAAA
ATTTAAAAAAAGAAAATATTGCAAGCTTAGAACAAATCAATACTTTATCCAATTTAGAACTTGCAACTTTAATTAAGCCT
AGCGGATTTTATAATACCAAAACTAAGCGTTTAAAAGGTTTGGTAGAAAGTATCATAAACACTTATGAAAATTTAGAAAA
TTTTAAAACAAATGCAAGCAGAGAATGGCTTTTAAATATCAAAGGTTTAGGTTTTGAAAGCGTTGATAGTATTTTAAACT
ATCTTTGCAAAAGAGAGATTTTGGTTGTAGATAATTATAGTTTGCGTTTGGCTTTTTACTTAGGTTATGAGTTTGAAAAT
TATGAAGAATTAAGAGAATTTTTTCAAAGTGACATAGAGAGTGAGCAAGAAAATTTGTATAAAATTTTAGGAAAAAAATG
CGAACTTTACGAACTTTATCAAATTTTTCATGCTTTGATTGTAGCTTTTGCAAAACAGAGTTTTAAAGGACAAAAATTAA
GCCCTAAGGGTGAAGAATGGATCAAAATTTTAAAGGAAGATTTATGA

Upstream 100 bases:

>100_bases
AGCTTTTGCACGCTAAAGCTAAAGAATTTGCTACTCTAAGAGCAAGTAGAAGTGGTCGTACCGCAAAGCAATTTTATTTA
GCTTTTAAGGAGAATTTTAA

Downstream 100 bases:

>100_bases
AAGCAAAAGGAAGTGAACTTATACCTGTTTTAACTATAGCAGGGAGTGATTGTAGTGGTGGAGCAGGGATACAAGCCGAT
CTTAAAACCTTTAGTGCACA

Product: endonuclease III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTGAQIFTKLLNLDLNYHDFDWLENQGLSEFELLISVVLTQNTNWKNVLKALENLKKENIASLEQINTLSNLELATLIKP
SGFYNTKTKRLKGLVESIINTYENLENFKTNASREWLLNIKGLGFESVDSILNYLCKREILVVDNYSLRLAFYLGYEFEN
YEELREFFQSDIESEQENLYKILGKKCELYELYQIFHALIVAFAKQSFKGQKLSPKGEEWIKILKEDL

Sequences:

>Translated_228_residues
MTGAQIFTKLLNLDLNYHDFDWLENQGLSEFELLISVVLTQNTNWKNVLKALENLKKENIASLEQINTLSNLELATLIKP
SGFYNTKTKRLKGLVESIINTYENLENFKTNASREWLLNIKGLGFESVDSILNYLCKREILVVDNYSLRLAFYLGYEFEN
YEELREFFQSDIESEQENLYKILGKKCELYELYQIFHALIVAFAKQSFKGQKLSPKGEEWIKILKEDL
>Mature_227_residues
TGAQIFTKLLNLDLNYHDFDWLENQGLSEFELLISVVLTQNTNWKNVLKALENLKKENIASLEQINTLSNLELATLIKPS
GFYNTKTKRLKGLVESIINTYENLENFKTNASREWLLNIKGLGFESVDSILNYLCKREILVVDNYSLRLAFYLGYEFENY
EELREFFQSDIESEQENLYKILGKKCELYELYQIFHALIVAFAKQSFKGQKLSPKGEEWIKILKEDL

Specific function: Unknown

COG id: COG2231

COG function: function code L; Uncharacterized protein related to Endonuclease III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Nth/MutY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011257
- InterPro:   IPR003651
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170 [H]

Pfam domain/function: PF00730 HhH-GPD [H]

EC number: NA

Molecular weight: Translated: 26692; Mature: 26561

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGAQIFTKLLNLDLNYHDFDWLENQGLSEFELLISVVLTQNTNWKNVLKALENLKKENI
CCHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ASLEQINTLSNLELATLIKPSGFYNTKTKRLKGLVESIINTYENLENFKTNASREWLLNI
HHHHHHHHHHCCHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEE
KGLGFESVDSILNYLCKREILVVDNYSLRLAFYLGYEFENYEELREFFQSDIESEQENLY
CCCCHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
KILGKKCELYELYQIFHALIVAFAKQSFKGQKLSPKGEEWIKILKEDL
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TGAQIFTKLLNLDLNYHDFDWLENQGLSEFELLISVVLTQNTNWKNVLKALENLKKENI
CHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ASLEQINTLSNLELATLIKPSGFYNTKTKRLKGLVESIINTYENLENFKTNASREWLLNI
HHHHHHHHHHCCHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEE
KGLGFESVDSILNYLCKREILVVDNYSLRLAFYLGYEFENYEELREFFQSDIESEQENLY
CCCCHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
KILGKKCELYELYQIFHALIVAFAKQSFKGQKLSPKGEEWIKILKEDL
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]