| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is fliW
Identifier: 57237957
GI number: 57237957
Start: 1135970
End: 1136359
Strand: Direct
Name: fliW
Synonym: CJE1218
Alternate gene names: 57237957
Gene position: 1135970-1136359 (Clockwise)
Preceding gene: 57237954
Following gene: 57237958
Centisome position: 63.9
GC content: 27.95
Gene sequence:
>390_bases ATGACCCTAGCTGTTAAATGCCCTATCTTAGGTTTTGAAGAAACCAAAAATATGGAATTTTCAACTATCGATGAAGTATT TGTAAGACTTAAAAGTCTTGATGGTAAAGACTTTTCTTTTGTTTTAATTAATCCTTATTTGATTAGACCTGATTATGAAT TTGATATACCAACTTATTATCAAGAGCTTCTTTCTTTAACACCTGAATCTAATATGAAAATTTTTAATATAGTAGCCATA GCAAAAAGCATTGAAGAATCGACAGTGAATTTTCTAGCTCCAGTAGTCATTAATCTTGATAATAATACTATGGTACAAGT GATACTAGATACAGTTAATTATCCCGACTTTTTTCAAGCTGATCAAATTGCTAATTATATTAAAAAATAA
Upstream 100 bases:
>100_bases TCTAAAATTATAATAAAATTAATTAAATAATTTAAAATTTTGGAATGATTATTGCTTATTTTATGTTAAAATATTAAACA TTATAACTTGAGGAGAAAAC
Downstream 100 bases:
>100_bases TGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGGTTAAAAGATGATTATGAAATTTGTATAGTA GGAAGAAGTATAGAAAAACT
Product: flagellar assembly protein FliW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLINPYLIRPDYEFDIPTYYQELLSLTPESNMKIFNIVAI AKSIEESTVNFLAPVVINLDNNTMVQVILDTVNYPDFFQADQIANYIKK
Sequences:
>Translated_129_residues MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLINPYLIRPDYEFDIPTYYQELLSLTPESNMKIFNIVAI AKSIEESTVNFLAPVVINLDNNTMVQVILDTVNYPDFFQADQIANYIKK >Mature_128_residues TLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLINPYLIRPDYEFDIPTYYQELLSLTPESNMKIFNIVAIA KSIEESTVNFLAPVVINLDNNTMVQVILDTVNYPDFFQADQIANYIKK
Specific function: Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
COG id: COG1699
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliW family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FLIW_CAMJ8 (A8FMC8)
Other databases:
- EMBL: CP000814 - RefSeq: YP_001482592.1 - ProteinModelPortal: A8FMC8 - SMR: A8FMC8 - STRING: A8FMC8 - GeneID: 5617576 - GenomeReviews: CP000814_GR - KEGG: cju:C8J_1016 - eggNOG: COG1699 - HOGENOM: HBG393078 - OMA: PANACAL - ProtClustDB: PRK13282 - BioCyc: CJEJ407148:C8J_1016-MONOMER - GO: GO:0005737 - GO: GO:0019861 - HAMAP: MF_01185 - InterPro: IPR003775
Pfam domain/function: PF02623 FliW
EC number: NA
Molecular weight: Translated: 14844; Mature: 14713
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLINPYLIRPDYEFDIPTYY CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCCHHHH QELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNNTMVQVILDTVNYPDFFQA HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEEECCCCCCCCCH DQIANYIKK HHHHHHHCC >Mature Secondary Structure TLAVKCPILGFEETKNMEFSTIDEVFVRLKSLDGKDFSFVLINPYLIRPDYEFDIPTYY EEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCCHHHH QELLSLTPESNMKIFNIVAIAKSIEESTVNFLAPVVINLDNNTMVQVILDTVNYPDFFQA HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEEECCCCCCCCCH DQIANYIKK HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA