| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237882
Identifier: 57237882
GI number: 57237882
Start: 1054669
End: 1055937
Strand: Direct
Name: 57237882
Synonym: CJE1138
Alternate gene names: NA
Gene position: 1054669-1055937 (Clockwise)
Preceding gene: 57237881
Following gene: 57237884
Centisome position: 59.32
GC content: 31.84
Gene sequence:
>1269_bases ATGAGTGAAACTTATGAGATTTATACACCCAATGGATTAGCATTAGATGTGGAAAAAGATACCAATAAAATACTCTTTAA AGAAAATGTTAAGCCCACAGGCAACTATACCGAAGAATATTCCAAAGCTTTGTTTGAAGCACACGACATTAAACGAAACT CCCCCTACAAAGACTATAAACCCCAATACCTAGATCCTAACTTTTATACAGGGCAAAGTTCTACTTTACTTGAATTTAAA GAATGGCAAAGTATTTATTTAAAAGATCCTATAAAAGGAGCTATAGCTCCTTGGACTAAAGCAGAAAAAGCTTATTATAA ATCTTTAAAAACCAAAAGAGAAAGATATAAATATTTAGCAATAAGAAGTGGATTAAGATCTGTGGTTATAGATATACCCT ATGATGCTTATGCTAATGTAGATGAAAAAGGAAGATTGGTTAATGAAGATTATGCCTATATTTACGATGAAGTAAGTTCT CATCGTGGAACATTAAAATCTTATTCTTTCTTTAATGAATGGGAATTGTCTGCTTTACTTTTGGGAAATATTAAAGCTAG TCCTACAGCTGCCGTAGGATTTAAAGCAAGACAACAACAAGCATTGTTTTTACAAGCTCAACTTGGAGATAAAAATGCTT TTAAAAGTTTAGGTTTAGCAGTATTGTGTTCTAATTCTTTTCTTACAGGGCAACATTGGAATAAGCTTAGAGCAAAAATG ATTTACGATTTACACGATTATCATTATGAGAGTTTATTAGATGAATTTGGTATGCTTCCTTTTTTAGATGAGATTATAGG AGTAGATTGGGTGATTGATTTAAATCGATATAAATTTGCTCTTGATGAAGAAGGCAGAATTATTTGGGCTTTATATGATG ATATTGAAAAAGGTAAATTAAAAGATCCAAGAGATATAGATTCTACTCCTGAAAGCAGGAAAGAATTTGATCATTATATG GATGGATATAAAAATGGAATGGCAACTAGATTTGATGTAGATATTAGAAACGAAAGAGATGAAAGATCTGCTAAACTGAC TATGGATACCCTAGTATTAAGCGCCAAACTAGCAGCCCTCACTCCTCCTCAAGGCTATCCTAATGCTCCAAGATACTATA GCCCTGAAAGACTAGAAATTATTTATAAAAGACATAAGCTTGATAAACTTCTTGACCCAAGAATTCCTGCTATTTATAGA TATAATTTTCCAGAGGATTTAAGAGTTAAGATACTAGCTTATGCTAAAGAGCATAATATAAAAGAGTGA
Upstream 100 bases:
>100_bases ACAATCCCAAAAATTACCGCCTAATTTCATAGGCAGATTAGCTACTACTATAATCATAGAAGATGGTTTATATATGGGTT AAATTAAGAAAGGATAGATA
Downstream 100 bases:
>100_bases AAATCACTCAAAATCTTTAATATACTTTTCCAATGCTTTGATGGTAAGATTTTCAAAAAGAATCTTATCTTCTTTGATAT TGTTTTGTATGGCAGCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MSETYEIYTPNGLALDVEKDTNKILFKENVKPTGNYTEEYSKALFEAHDIKRNSPYKDYKPQYLDPNFYTGQSSTLLEFK EWQSIYLKDPIKGAIAPWTKAEKAYYKSLKTKRERYKYLAIRSGLRSVVIDIPYDAYANVDEKGRLVNEDYAYIYDEVSS HRGTLKSYSFFNEWELSALLLGNIKASPTAAVGFKARQQQALFLQAQLGDKNAFKSLGLAVLCSNSFLTGQHWNKLRAKM IYDLHDYHYESLLDEFGMLPFLDEIIGVDWVIDLNRYKFALDEEGRIIWALYDDIEKGKLKDPRDIDSTPESRKEFDHYM DGYKNGMATRFDVDIRNERDERSAKLTMDTLVLSAKLAALTPPQGYPNAPRYYSPERLEIIYKRHKLDKLLDPRIPAIYR YNFPEDLRVKILAYAKEHNIKE
Sequences:
>Translated_422_residues MSETYEIYTPNGLALDVEKDTNKILFKENVKPTGNYTEEYSKALFEAHDIKRNSPYKDYKPQYLDPNFYTGQSSTLLEFK EWQSIYLKDPIKGAIAPWTKAEKAYYKSLKTKRERYKYLAIRSGLRSVVIDIPYDAYANVDEKGRLVNEDYAYIYDEVSS HRGTLKSYSFFNEWELSALLLGNIKASPTAAVGFKARQQQALFLQAQLGDKNAFKSLGLAVLCSNSFLTGQHWNKLRAKM IYDLHDYHYESLLDEFGMLPFLDEIIGVDWVIDLNRYKFALDEEGRIIWALYDDIEKGKLKDPRDIDSTPESRKEFDHYM DGYKNGMATRFDVDIRNERDERSAKLTMDTLVLSAKLAALTPPQGYPNAPRYYSPERLEIIYKRHKLDKLLDPRIPAIYR YNFPEDLRVKILAYAKEHNIKE >Mature_421_residues SETYEIYTPNGLALDVEKDTNKILFKENVKPTGNYTEEYSKALFEAHDIKRNSPYKDYKPQYLDPNFYTGQSSTLLEFKE WQSIYLKDPIKGAIAPWTKAEKAYYKSLKTKRERYKYLAIRSGLRSVVIDIPYDAYANVDEKGRLVNEDYAYIYDEVSSH RGTLKSYSFFNEWELSALLLGNIKASPTAAVGFKARQQQALFLQAQLGDKNAFKSLGLAVLCSNSFLTGQHWNKLRAKMI YDLHDYHYESLLDEFGMLPFLDEIIGVDWVIDLNRYKFALDEEGRIIWALYDDIEKGKLKDPRDIDSTPESRKEFDHYMD GYKNGMATRFDVDIRNERDERSAKLTMDTLVLSAKLAALTPPQGYPNAPRYYSPERLEIIYKRHKLDKLLDPRIPAIYRY NFPEDLRVKILAYAKEHNIKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49235; Mature: 49104
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETYEIYTPNGLALDVEKDTNKILFKENVKPTGNYTEEYSKALFEAHDIKRNSPYKDYK CCCCEEEECCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC PQYLDPNFYTGQSSTLLEFKEWQSIYLKDPIKGAIAPWTKAEKAYYKSLKTKRERYKYLA CCCCCCCEECCCCCCEEEHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IRSGLRSVVIDIPYDAYANVDEKGRLVNEDYAYIYDEVSSHRGTLKSYSFFNEWELSALL HHHCCCEEEEECCCHHHCCCCCCCCEECCCHHHHHHHHHHCCCCHHHCCCCCCCCEEEEE LGNIKASPTAAVGFKARQQQALFLQAQLGDKNAFKSLGLAVLCSNSFLTGQHWNKLRAKM EECCCCCCCHHCCCHHHCCCEEEEEEECCCHHHHHHCCEEEEECCCEECCHHHHHHHHHH IYDLHDYHYESLLDEFGMLPFLDEIIGVDWVIDLNRYKFALDEEGRIIWALYDDIEKGKL HHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCC KDPRDIDSTPESRKEFDHYMDGYKNGMATRFDVDIRNERDERSAKLTMDTLVLSAKLAAL CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC TPPQGYPNAPRYYSPERLEIIYKRHKLDKLLDPRIPAIYRYNFPEDLRVKILAYAKEHNI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEHHCCC KE CC >Mature Secondary Structure SETYEIYTPNGLALDVEKDTNKILFKENVKPTGNYTEEYSKALFEAHDIKRNSPYKDYK CCCEEEECCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC PQYLDPNFYTGQSSTLLEFKEWQSIYLKDPIKGAIAPWTKAEKAYYKSLKTKRERYKYLA CCCCCCCEECCCCCCEEEHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH IRSGLRSVVIDIPYDAYANVDEKGRLVNEDYAYIYDEVSSHRGTLKSYSFFNEWELSALL HHHCCCEEEEECCCHHHCCCCCCCCEECCCHHHHHHHHHHCCCCHHHCCCCCCCCEEEEE LGNIKASPTAAVGFKARQQQALFLQAQLGDKNAFKSLGLAVLCSNSFLTGQHWNKLRAKM EECCCCCCCHHCCCHHHCCCEEEEEEECCCHHHHHHCCEEEEECCCEECCHHHHHHHHHH IYDLHDYHYESLLDEFGMLPFLDEIIGVDWVIDLNRYKFALDEEGRIIWALYDDIEKGKL HHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEECCCEEEEECCCCCEEEEEECCCCCCCC KDPRDIDSTPESRKEFDHYMDGYKNGMATRFDVDIRNERDERSAKLTMDTLVLSAKLAAL CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC TPPQGYPNAPRYYSPERLEIIYKRHKLDKLLDPRIPAIYRYNFPEDLRVKILAYAKEHNI CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEHHCCC KE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA