| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237884
Identifier: 57237884
GI number: 57237884
Start: 1057767
End: 1059182
Strand: Direct
Name: 57237884
Synonym: CJE1141
Alternate gene names: NA
Gene position: 1057767-1059182 (Clockwise)
Preceding gene: 57237882
Following gene: 57237885
Centisome position: 59.5
GC content: 25.56
Gene sequence:
>1416_bases ATGTCCCTTAATTCTTATATGAGTCTTGATATTTTAAATTCTACTTCAAATCCCCTACCCTTTAAAATCACTAAAGCCCT TATCAAAGAAAGTCTTGAAGAGCTTTTTTCTATAGAATGTGAAGGCTTTTTTGAAAGTTTAGAACAAGATTTATTTTCTT TAAATACTTTAACCAATGCTTCATCTCATCCAAGCACCCCTACAACTTTTAATTTTCATCCTAATGTTTTAATCGATCAA GAAGCTATTTTAAGTATCCATAATCCTTATGAGAATAATACCTTAAACTTTGATAACAATGAAGTAAAAAACTATAAGGG AATTATCACTTATATAAAATATCTAGGTATTAATCATGAAAGTGCTTTAAATATTAATGATAGCACTTCAAATACTAAGC AAATACAATACAAGCATTTTTTTTCTTTTAAGCTTCAATCAGTCTTGATAAGACTTTCTTTAAATAAAGCCAATCGTATT TATACTCATACTAATATTATAGAAGTGATTAAACAAACCCTTGGTTTTTATCAAGATATCTTACATAAAGAAATTGATTA TTCTAATATACATTTTAATTATGAAGAACAAGAACTCATCTCTCAATACAATGAAAGTGATTTAGACTTTATTACAAGAT TAAGCCATAATAATGGAATCTTTTTTTATGAAGATGAGAACACTATTTATTTTTGTGATGTGTATAAAAATGTAAAAAAT AAAGAAATTGAGTATAATCCTAATATTAATAATATTTTAAATCAAGCTTGTATTTCTTCTATTTATAAAGAGCAAAGCTT AAGAACTAATTCTTTTACACATTCTAGTATTAATGCCAATACTCCTTTAAATCTTTTATCTTTACACTCTAGTAAAGTTC CTTATGAACAAGAACTTAATAACAAAGCTTGTTATAATGAACATTTTTATGAGAGTGAATATTCTTTTACAAAAAGCATT GATTTAAAGACTAAGCCTTCTCTTAAAGAAAAAAGAGCCTTAGTATTAAATGAAAGCTTACTAGCAAAAAGTAATATTTA TCATCTTAGCTTAGGAGATTTTATCACTTTAAATTATAAGGAGTTTAATCATCAAGAAGAAATAAAAAATCAAGATGAAG AAAAACAAGATAAAGCTTCTTTGCTTAAAGACTTTATTATTATTGCTAATACTCAAATCTTAATTGATGATGCCATCTTA GCTAATTCTATTAATACTAATGATCATTTAAATTTAAGTAAATCTTATTCTAATACTTTAACTTTACTAAAAAAGAATAT TATCTTTACTCCAAGTTTTAAAGCTAAACCTAAAGCTCCTAATAGCACTCAAGGTATTGTTATAGGAGAGAGTAAGGATA TAGAAAGTGAGAGAAATACTATTTATACTGATGAGCATGGGGGAGGGTTAAGGTAA
Upstream 100 bases:
>100_bases ACCATACCCTAAAATAAACTTTATTTTACCCACTTTATGCTAAAATAAATCACATAAGCTTATAGGCTATTAATCATCAA CAAACCCAAAAGGATCTTCA
Downstream 100 bases:
>100_bases GGATTAATCTTTATGCCAATCAAGAAGAATTAGATAATAATACTTTTATTACAAATGATATAGATACAAATTCTTCTAAT TTATCAAGCAATACTTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MSLNSYMSLDILNSTSNPLPFKITKALIKESLEELFSIECEGFFESLEQDLFSLNTLTNASSHPSTPTTFNFHPNVLIDQ EAILSIHNPYENNTLNFDNNEVKNYKGIITYIKYLGINHESALNINDSTSNTKQIQYKHFFSFKLQSVLIRLSLNKANRI YTHTNIIEVIKQTLGFYQDILHKEIDYSNIHFNYEEQELISQYNESDLDFITRLSHNNGIFFYEDENTIYFCDVYKNVKN KEIEYNPNINNILNQACISSIYKEQSLRTNSFTHSSINANTPLNLLSLHSSKVPYEQELNNKACYNEHFYESEYSFTKSI DLKTKPSLKEKRALVLNESLLAKSNIYHLSLGDFITLNYKEFNHQEEIKNQDEEKQDKASLLKDFIIIANTQILIDDAIL ANSINTNDHLNLSKSYSNTLTLLKKNIIFTPSFKAKPKAPNSTQGIVIGESKDIESERNTIYTDEHGGGLR
Sequences:
>Translated_471_residues MSLNSYMSLDILNSTSNPLPFKITKALIKESLEELFSIECEGFFESLEQDLFSLNTLTNASSHPSTPTTFNFHPNVLIDQ EAILSIHNPYENNTLNFDNNEVKNYKGIITYIKYLGINHESALNINDSTSNTKQIQYKHFFSFKLQSVLIRLSLNKANRI YTHTNIIEVIKQTLGFYQDILHKEIDYSNIHFNYEEQELISQYNESDLDFITRLSHNNGIFFYEDENTIYFCDVYKNVKN KEIEYNPNINNILNQACISSIYKEQSLRTNSFTHSSINANTPLNLLSLHSSKVPYEQELNNKACYNEHFYESEYSFTKSI DLKTKPSLKEKRALVLNESLLAKSNIYHLSLGDFITLNYKEFNHQEEIKNQDEEKQDKASLLKDFIIIANTQILIDDAIL ANSINTNDHLNLSKSYSNTLTLLKKNIIFTPSFKAKPKAPNSTQGIVIGESKDIESERNTIYTDEHGGGLR >Mature_470_residues SLNSYMSLDILNSTSNPLPFKITKALIKESLEELFSIECEGFFESLEQDLFSLNTLTNASSHPSTPTTFNFHPNVLIDQE AILSIHNPYENNTLNFDNNEVKNYKGIITYIKYLGINHESALNINDSTSNTKQIQYKHFFSFKLQSVLIRLSLNKANRIY THTNIIEVIKQTLGFYQDILHKEIDYSNIHFNYEEQELISQYNESDLDFITRLSHNNGIFFYEDENTIYFCDVYKNVKNK EIEYNPNINNILNQACISSIYKEQSLRTNSFTHSSINANTPLNLLSLHSSKVPYEQELNNKACYNEHFYESEYSFTKSID LKTKPSLKEKRALVLNESLLAKSNIYHLSLGDFITLNYKEFNHQEEIKNQDEEKQDKASLLKDFIIIANTQILIDDAILA NSINTNDHLNLSKSYSNTLTLLKKNIIFTPSFKAKPKAPNSTQGIVIGESKDIESERNTIYTDEHGGGLR
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54303; Mature: 54172
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNSYMSLDILNSTSNPLPFKITKALIKESLEELFSIECEGFFESLEQDLFSLNTLTNA CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC SSHPSTPTTFNFHPNVLIDQEAILSIHNPYENNTLNFDNNEVKNYKGIITYIKYLGINHE CCCCCCCEEEECCCCEEECHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC SALNINDSTSNTKQIQYKHFFSFKLQSVLIRLSLNKANRIYTHTNIIEVIKQTLGFYQDI CEEECCCCCCCCCEEEEHHHHHHHHHHEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH LHKEIDYSNIHFNYEEQELISQYNESDLDFITRLSHNNGIFFYEDENTIYFCDVYKNVKN HHHCCCCCEEEECCCHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCC KEIEYNPNINNILNQACISSIYKEQSLRTNSFTHSSINANTPLNLLSLHSSKVPYEQELN CCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCC NKACYNEHFYESEYSFTKSIDLKTKPSLKEKRALVLNESLLAKSNIYHLSLGDFITLNYK CCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCHHHHHCCCEEEEECCCEEEEEHH EFNHQEEIKNQDEEKQDKASLLKDFIIIANTQILIDDAILANSINTNDHLNLSKSYSNTL HCCCHHHHCCCCHHHHHHHHHHHHHHHEECCEEEEECHHHHCCCCCCCCEEECHHHHHHH TLLKKNIIFTPSFKAKPKAPNSTQGIVIGESKDIESERNTIYTDEHGGGLR HHHHHCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure SLNSYMSLDILNSTSNPLPFKITKALIKESLEELFSIECEGFFESLEQDLFSLNTLTNA CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC SSHPSTPTTFNFHPNVLIDQEAILSIHNPYENNTLNFDNNEVKNYKGIITYIKYLGINHE CCCCCCCEEEECCCCEEECHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC SALNINDSTSNTKQIQYKHFFSFKLQSVLIRLSLNKANRIYTHTNIIEVIKQTLGFYQDI CEEECCCCCCCCCEEEEHHHHHHHHHHEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH LHKEIDYSNIHFNYEEQELISQYNESDLDFITRLSHNNGIFFYEDENTIYFCDVYKNVKN HHHCCCCCEEEECCCHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCC KEIEYNPNINNILNQACISSIYKEQSLRTNSFTHSSINANTPLNLLSLHSSKVPYEQELN CCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCC NKACYNEHFYESEYSFTKSIDLKTKPSLKEKRALVLNESLLAKSNIYHLSLGDFITLNYK CCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCHHHHHCCCEEEEECCCEEEEEHH EFNHQEEIKNQDEEKQDKASLLKDFIIIANTQILIDDAILANSINTNDHLNLSKSYSNTL HCCCHHHHCCCCHHHHHHHHHHHHHHHEECCEEEEECHHHHCCCCCCCCEEECHHHHHHH TLLKKNIIFTPSFKAKPKAPNSTQGIVIGESKDIESERNTIYTDEHGGGLR HHHHHCEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA