Definition | Campylobacter jejuni RM1221, complete genome. |
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Accession | NC_003912 |
Length | 1,777,831 |
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The map label for this gene is 57237818
Identifier: 57237818
GI number: 57237818
Start: 1002252
End: 1002743
Strand: Reverse
Name: 57237818
Synonym: CJE1073
Alternate gene names: NA
Gene position: 1002743-1002252 (Counterclockwise)
Preceding gene: 57237819
Following gene: 57237817
Centisome position: 56.4
GC content: 31.1
Gene sequence:
>492_bases ATGAAAGAGCTAGAAAAGTATAACACTTGCTTAAAACGCATTGATGAATTTAGTCAAAATCTAGGAATAAAGAAAAAAGA TAGAACGATTTTTAAAATGAAGCAAAGCGAGAATGAAAACGAAAAATGTTTAGTTCTTGAAAATGGAAGTTTTGATTCTC CTGAGCCTTGGTTTGTGATCGATGAAAACGATGAAATTCACACTTTGCTTTCTTTGCAAAGTCTTAAGAATATACTTGAA AGTTTAAAACAAAGTCAAAAAGAGAATTTTGAATTGCGTTTAGAAAAGGCGATTTATCAACAAATTCCTGTAGATTTTAA CGATGTTTGGACGGTTGCTATGGATGAGATCAAGCAAAAGGCGCAAAATGGCACCATGGAAGTTAGTATTGATCTTGAAA AATTAATTTCTAAAATCAAACAAGAGCATCCAAATTTATTTGTAGATATGCAAGCGATGATAGAAAGGGTAAACCAAAAT GAGAGATTATAA
Upstream 100 bases:
>100_bases TTTTTGAAAAACATGCAGATGTGATTTTTGAAGAAGCAAGAAATCGCCTTTATGTGGTAAAAGCCTTGCTTTGCTTTTTG GATAATCAGAGAGGAAGAGA
Downstream 100 bases:
>100_bases AGCTTTTGTAAAATACTCTAAAGCAGGACCACGCTACACTTCTTATCCTACAGCAGTAGAGTTTAATGCAAATTTCAAAT ACGAAGAATATATAGAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKELEKYNTCLKRIDEFSQNLGIKKKDRTIFKMKQSENENEKCLVLENGSFDSPEPWFVIDENDEIHTLLSLQSLKNILE SLKQSQKENFELRLEKAIYQQIPVDFNDVWTVAMDEIKQKAQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQN ERL
Sequences:
>Translated_163_residues MKELEKYNTCLKRIDEFSQNLGIKKKDRTIFKMKQSENENEKCLVLENGSFDSPEPWFVIDENDEIHTLLSLQSLKNILE SLKQSQKENFELRLEKAIYQQIPVDFNDVWTVAMDEIKQKAQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQN ERL >Mature_163_residues MKELEKYNTCLKRIDEFSQNLGIKKKDRTIFKMKQSENENEKCLVLENGSFDSPEPWFVIDENDEIHTLLSLQSLKNILE SLKQSQKENFELRLEKAIYQQIPVDFNDVWTVAMDEIKQKAQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQN ERL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0763 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1011_CAMJJ (A1VZY1)
Other databases:
- EMBL: CP000538 - RefSeq: YP_001000672.1 - STRING: A1VZY1 - GeneID: 4682582 - GenomeReviews: CP000538_GR - KEGG: cjj:CJJ81176_1011 - TIGR: CJJ81176_1011 - eggNOG: NOG135166 - HOGENOM: HBG393507 - OMA: PWFGIDE - ProtClustDB: CLSK872410 - BioCyc: CJEJ354242:CJJ81176_1011-MONOMER - HAMAP: MF_02110 - InterPro: IPR019724
Pfam domain/function: PF10788 DUF2603
EC number: NA
Molecular weight: Translated: 19265; Mature: 19265
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELEKYNTCLKRIDEFSQNLGIKKKDRTIFKMKQSENENEKCLVLENGSFDSPEPWFVI CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEE DENDEIHTLLSLQSLKNILESLKQSQKENFELRLEKAIYQQIPVDFNDVWTVAMDEIKQK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQNERL HCCCCEEEEECHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCC >Mature Secondary Structure MKELEKYNTCLKRIDEFSQNLGIKKKDRTIFKMKQSENENEKCLVLENGSFDSPEPWFVI CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEE DENDEIHTLLSLQSLKNILESLKQSQKENFELRLEKAIYQQIPVDFNDVWTVAMDEIKQK CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH AQNGTMEVSIDLEKLISKIKQEHPNLFVDMQAMIERVNQNERL HCCCCEEEEECHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA