Definition | Campylobacter jejuni RM1221, complete genome. |
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Accession | NC_003912 |
Length | 1,777,831 |
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The map label for this gene is 57237813
Identifier: 57237813
GI number: 57237813
Start: 997829
End: 998440
Strand: Reverse
Name: 57237813
Synonym: CJE1068
Alternate gene names: NA
Gene position: 998440-997829 (Counterclockwise)
Preceding gene: 57237815
Following gene: 57237812
Centisome position: 56.16
GC content: 29.25
Gene sequence:
>612_bases ATGGAAAAATCACTTTTATTTCATTTTAGACGCATTGGAGTTGAATTTATCATTTTTAGTGTTTATGCTGTTTTTAGTAT CTCTTGGGCAGCAACAGGGTCTTTAATGCCTTTGATTTCAAATGATCTTGCCCTAAATACTCAGCAAGCTACTTTAATCA CTAGCATGATAGTAGTTGCGAAAATTTTTGGTGCTTATCTTGGATTATTTTTTAAAAGAAAAAATATCTCTTTTAAAATA ATGCTATTGTCTGGAGGAGCGTGTATTTTTATATGCGGATTTTGTATGTTGTTTTTACAAAATTTAGTATTGATACAGAT TTTTGCTGTGTTATCAGGCATTTTTTATTCTATGTGGTTTCCATTTTTCTTTAATCTACCTTCAGAATTAAAAAATTCCA ACCCAAATCAAACTGCTTATATTATGAGTGCTTTTTGGAGTATTACCTTTGTTATACTATCATTTAACCTATGGGTAGTA TCTTGGAGTGTTGATAAAACCCATAGTTTTACTTTGGGTTTTGTTTATATTTTTGCTTTGATTTTTATTTCAGCGATCTT AGCACAATTTGTTTTACCTAGAAGAGAAAATTTTATACAAGGAGAAAAATAG
Upstream 100 bases:
>100_bases AATATATAAAAAAATAATTAAATTAAAAAAATAATTAAAGATAATAAATATCTTATTTTTTTATGTTATATTTTAATAAA TATCTAAAAAGGATTTTGAT
Downstream 100 bases:
>100_bases AATGAATTTAATTCCAGAAATACTAGACTTACAAGGCGAATTTGAAAAAATTCGTCATCAAATTCATGAAAATCCTGAGC TTGGTTTTGATGAATTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MEKSLLFHFRRIGVEFIIFSVYAVFSISWAATGSLMPLISNDLALNTQQATLITSMIVVAKIFGAYLGLFFKRKNISFKI MLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGIFYSMWFPFFFNLPSELKNSNPNQTAYIMSAFWSITFVILSFNLWVV SWSVDKTHSFTLGFVYIFALIFISAILAQFVLPRRENFIQGEK
Sequences:
>Translated_203_residues MEKSLLFHFRRIGVEFIIFSVYAVFSISWAATGSLMPLISNDLALNTQQATLITSMIVVAKIFGAYLGLFFKRKNISFKI MLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGIFYSMWFPFFFNLPSELKNSNPNQTAYIMSAFWSITFVILSFNLWVV SWSVDKTHSFTLGFVYIFALIFISAILAQFVLPRRENFIQGEK >Mature_203_residues MEKSLLFHFRRIGVEFIIFSVYAVFSISWAATGSLMPLISNDLALNTQQATLITSMIVVAKIFGAYLGLFFKRKNISFKI MLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGIFYSMWFPFFFNLPSELKNSNPNQTAYIMSAFWSITFVILSFNLWVV SWSVDKTHSFTLGFVYIFALIFISAILAQFVLPRRENFIQGEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 23170; Mature: 23170
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSLLFHFRRIGVEFIIFSVYAVFSISWAATGSLMPLISNDLALNTQQATLITSMIVVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHHHHH KIFGAYLGLFFKRKNISFKIMLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGIFYSMWF HHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFFFNLPSELKNSNPNQTAYIMSAFWSITFVILSFNLWVVSWSVDKTHSFTLGFVYIFAL HHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHH IFISAILAQFVLPRRENFIQGEK HHHHHHHHHHHCCCHHCCCCCCC >Mature Secondary Structure MEKSLLFHFRRIGVEFIIFSVYAVFSISWAATGSLMPLISNDLALNTQQATLITSMIVVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHHHHH KIFGAYLGLFFKRKNISFKIMLLSGGACIFICGFCMLFLQNLVLIQIFAVLSGIFYSMWF HHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFFFNLPSELKNSNPNQTAYIMSAFWSITFVILSFNLWVVSWSVDKTHSFTLGFVYIFAL HHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHH IFISAILAQFVLPRRENFIQGEK HHHHHHHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]