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The map label for this gene is oxaA [H]

Identifier: 57237786

GI number: 57237786

Start: 977312

End: 978904

Strand: Reverse

Name: oxaA [H]

Synonym: CJE1038

Alternate gene names: 57237786

Gene position: 978904-977312 (Counterclockwise)

Preceding gene: 57237787

Following gene: 57237785

Centisome position: 55.06

GC content: 31.07

Gene sequence:

>1593_bases
GTGAATAATTCAAATAATATTTTTCAGCAAAAGCGTATACTTTTAGCTGTTGTGATTTCTTTTTTATTTTTTGTTGTTTA
CGATTATTTTTTCATTCCAAAACAACCTTTAAAAATAGAACAAAACATTACACAACAAAATCAACAAAACACAAGCATAA
ATAACACTCCTAATATACAAAATACCACCACAAATACTCCAAGTGCAGCTTTAGTTTCACAAGATAGTGTGATATCTAAG
GTTCAAAGCAAGCATTTTGAAGCACAAATTGACTCTTTTGGTAGAATTTCTGCTTTTTATTTAAAAGATAAAAAATACCA
AAATGAGAAAGGAGAATTTATAAATCTTGTTAGCAAGGAAAATAGTCCTTATCCTTTAGAAATGCGTTTTAGTGATCCAA
GTATTAACTCAGAGGCTTTTAAAATTCCTTATGTTGCTAACGCTAGCAATCTTTTTGTTGATGAAAATGGAAGTCAAGTT
TTAAAACTCACTCAAAATCTTTCTGGATTGAAAATCGAAAAAGATATTACTTTTTATCCAAAAGGAAATTATGAGATAGA
AGTTAAACTCAGCAAGAATGCAAATTATTTTATAAGTCCAGGATATCGTCCAAATATTGCCGTAGATAGTTATACAGTTC
ATGGTGCTTTGGTAATGGATAATAAAGAAACCATCGAAACTTATAAAGATGGAGATGTAGAAAAGGATGAAAGTGCTAAT
AATGTCGTAATGACTTCGGCTTTTGATAGATACTATGCAACTTTCTTTTATAATTTTGATAAACCTTTAAATGTGGCAAT
CAGCAAGGATGCTAATCAAAACCCTATAGTTTTTGCTTATAGTGATAATGAATTTAAAGCAGGGGGCTATATAGGCTCTA
AAGAACATGTGATTTTAAGAAGTATAGATCCACGCCTTGAAGCAGTTGTTGAATATGGTTGGTTTACTTTTATTGCTAAG
CCTATGTTTGAGTTTTTGAATTTCTTGCATCAGTATATAGGAAATTGGGGTTGGGCTATCGTTGTGATGACTTTAATTGT
GCGTATTATTTTATTCCCGCTAACTTATAAGTCTATGATTTCTATGAATAAACTTAAAGATCTTGCTCCTAAAATGAAAG
ATATTAGAGAGCGTTATAAAGGCGATCCACAAAAAATGAATATGCACATGATGGAGCTTTATAAAAAACATGGTGCAAAT
CCTATGAGTGGTTGTTTGCCTATACTTTTACAAATTCCTATTTTCTTTGCTATTTATCGCGTTTTGCTTAATGCTATTGA
GCTAAAAGCAGCTCCTTGGGCGTTTTGGATACATGATTTATCGGTAATGGATCCTTATTTCATTTTGCCTATTTTAATGG
GTGCAACGATGTTTTTACAACAACTTATTACGCCTATGACTATACAAGATCCTATGCAAGCTAAGATTATGAAATTTTTA
CCAGTGATTTTTACTTTTTTCTTTATCACTTTCCCAGCAGGACTTACGCTTTATTGGTTTGTAAATAACCTTTGTTCTTT
GGTTCAACAATGGGTTATCAATAAAATATTTGCTAAAGAACATCACAAAAAACAAGCGGAGCATGAAAAATGA

Upstream 100 bases:

>100_bases
AGCCTATATTTTTAGCAAAAAAACAACTTTGTTTTTTATATATACCTTATAAAAATAAAAGTTTTTATCTTATAAAAATC
ATCTTTAAAAGGACAAATCA

Downstream 100 bases:

>100_bases
AAATCGAAGCCATTGATCTTCAAAGTGCCTTAACAGAAGCTTCAAGAAGTTTAGAATGTTCTGTGATGGACTTAGAATAT
GAGATTATTCAGCATCCAAG

Product: inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MNNSNNIFQQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPSAALVSQDSVISK
VQSKHFEAQIDSFGRISAFYLKDKKYQNEKGEFINLVSKENSPYPLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQV
LKLTQNLSGLKIEKDITFYPKGNYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALVMDNKETIETYKDGDVEKDESAN
NVVMTSAFDRYYATFFYNFDKPLNVAISKDANQNPIVFAYSDNEFKAGGYIGSKEHVILRSIDPRLEAVVEYGWFTFIAK
PMFEFLNFLHQYIGNWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMMELYKKHGAN
PMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFILPILMGATMFLQQLITPMTIQDPMQAKIMKFL
PVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFAKEHHKKQAEHEK

Sequences:

>Translated_530_residues
MNNSNNIFQQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPSAALVSQDSVISK
VQSKHFEAQIDSFGRISAFYLKDKKYQNEKGEFINLVSKENSPYPLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQV
LKLTQNLSGLKIEKDITFYPKGNYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALVMDNKETIETYKDGDVEKDESAN
NVVMTSAFDRYYATFFYNFDKPLNVAISKDANQNPIVFAYSDNEFKAGGYIGSKEHVILRSIDPRLEAVVEYGWFTFIAK
PMFEFLNFLHQYIGNWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMMELYKKHGAN
PMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFILPILMGATMFLQQLITPMTIQDPMQAKIMKFL
PVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFAKEHHKKQAEHEK
>Mature_530_residues
MNNSNNIFQQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQNTTTNTPSAALVSQDSVISK
VQSKHFEAQIDSFGRISAFYLKDKKYQNEKGEFINLVSKENSPYPLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQV
LKLTQNLSGLKIEKDITFYPKGNYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALVMDNKETIETYKDGDVEKDESAN
NVVMTSAFDRYYATFFYNFDKPLNVAISKDANQNPIVFAYSDNEFKAGGYIGSKEHVILRSIDPRLEAVVEYGWFTFIAK
PMFEFLNFLHQYIGNWGWAIVVMTLIVRIILFPLTYKSMISMNKLKDLAPKMKDIRERYKGDPQKMNMHMMELYKKHGAN
PMSGCLPILLQIPIFFAIYRVLLNAIELKAAPWAFWIHDLSVMDPYFILPILMGATMFLQQLITPMTIQDPMQAKIMKFL
PVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFAKEHHKKQAEHEK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=329, Percent_Identity=38.9057750759878, Blast_Score=258, Evalue=5e-70,
Organism=Drosophila melanogaster, GI24662345, Length=217, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI21356443, Length=217, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 61223; Mature: 61223

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSNNIFQQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
NTTTNTPSAALVSQDSVISKVQSKHFEAQIDSFGRISAFYLKDKKYQNEKGEFINLVSKE
CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEECC
NSPYPLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYP
CCCCCEEEEECCCCCCCCCEECCEEECCCEEEEECCCHHHHHHHCCCCCEEEECCEEEEE
KGNYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALVMDNKETIETYKDGDVEKDESAN
CCCEEEEEEEECCCCEEECCCCCCCEEEECEEEEEEEEECCHHHHHHHCCCCCCCCCCCC
NVVMTSAFDRYYATFFYNFDKPLNVAISKDANQNPIVFAYSDNEFKAGGYIGSKEHVILR
CEEEEHHHHHHEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCEECCCCCCCCCCEEEE
SIDPRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNWGWAIVVMTLIVRIILFPLTYKSMI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SMNKLKDLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYR
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VLLNAIELKAAPWAFWIHDLSVMDPYFILPILMGATMFLQQLITPMTIQDPMQAKIMKFL
HHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
PVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFAKEHHKKQAEHEK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNSNNIFQQKRILLAVVISFLFFVVYDYFFIPKQPLKIEQNITQQNQQNTSINNTPNIQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
NTTTNTPSAALVSQDSVISKVQSKHFEAQIDSFGRISAFYLKDKKYQNEKGEFINLVSKE
CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEECC
NSPYPLEMRFSDPSINSEAFKIPYVANASNLFVDENGSQVLKLTQNLSGLKIEKDITFYP
CCCCCEEEEECCCCCCCCCEECCEEECCCEEEEECCCHHHHHHHCCCCCEEEECCEEEEE
KGNYEIEVKLSKNANYFISPGYRPNIAVDSYTVHGALVMDNKETIETYKDGDVEKDESAN
CCCEEEEEEEECCCCEEECCCCCCCEEEECEEEEEEEEECCHHHHHHHCCCCCCCCCCCC
NVVMTSAFDRYYATFFYNFDKPLNVAISKDANQNPIVFAYSDNEFKAGGYIGSKEHVILR
CEEEEHHHHHHEEEEEEECCCCEEEEEECCCCCCCEEEEECCCCEECCCCCCCCCCEEEE
SIDPRLEAVVEYGWFTFIAKPMFEFLNFLHQYIGNWGWAIVVMTLIVRIILFPLTYKSMI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SMNKLKDLAPKMKDIRERYKGDPQKMNMHMMELYKKHGANPMSGCLPILLQIPIFFAIYR
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VLLNAIELKAAPWAFWIHDLSVMDPYFILPILMGATMFLQQLITPMTIQDPMQAKIMKFL
HHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
PVIFTFFFITFPAGLTLYWFVNNLCSLVQQWVINKIFAKEHHKKQAEHEK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]