Definition | Campylobacter jejuni RM1221, complete genome. |
---|---|
Accession | NC_003912 |
Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is 57237785
Identifier: 57237785
GI number: 57237785
Start: 976497
End: 977315
Strand: Reverse
Name: 57237785
Synonym: CJE1037
Alternate gene names: NA
Gene position: 977315-976497 (Counterclockwise)
Preceding gene: 57237786
Following gene: 57237784
Centisome position: 54.97
GC content: 30.65
Gene sequence:
>819_bases ATGAAAATCGAAGCCATTGATCTTCAAAGTGCCTTAACAGAAGCTTCAAGAAGTTTAGAATGTTCTGTGATGGACTTAGA ATATGAGATTATTCAGCATCCAAGAAAAGGTTTTTTTGGATTTGGAAGAAAAAAGGCAATTATAGAGGCTAAAGCAAAAA AAAGGATTTTGAAAAAAAATCCTAAAAAAGAATTTACAAGTTCAAAAAATCACAAACCAGAAACACATGAGCCAAAACAA GAAAACAAGATTGAAACAAAAAATGAAAAAAATAAAAGCCAAAAAGAAAAATATACAGTAAAAAGTGATGAAATTTTTGA TAGTTTTCATCGAGAAAGCAAAGGAGTGCGTAATACTCAGGATATTTTAGATGAGATTCGCATTCAGCTTGTAAAACTTT TAGAAAGCTCCCAGTTTAAAATAGAGCTTAGTGAACTTAGAATGTATGATGAAGATTGCGTTTTGATTCGATTGGATGGG GAAGATGCTGCTTTGATGATAGGTAAAGAAGCACATCGTTACAAGGCTATTTCTTATCTTTTACATAATTGGATCAATTT AAAATATAATCTTTTAGTGCGCCTTGAGATCGCTCAATTTTTAGAAAATCAAATTCAAGGTATGCAGCTTTATTTACAAA ACGTGATTGAAAAAATTAAAATTCATGGACGTGGTCAAACCAAACCTTTAGATGGGGTTTTGATAAAAATCGCTTTAGAG CAGTTAAGAGCTGAATTTCCAGATAAGTATGTAGGAATTAAGCAAAATAATGATCAAAGATTTGTTGTAATAAACGACTT TTTCAAAAAAGATGAGTGA
Upstream 100 bases:
>100_bases TTTATTGGTTTGTAAATAACCTTTGTTCTTTGGTTCAACAATGGGTTATCAATAAAATATTTGCTAAAGAACATCACAAA AAACAAGCGGAGCATGAAAA
Downstream 100 bases:
>100_bases TACTATAGCGGCTATTGCCACAGCTCATGGTGTGGGTTCGATTTCTATTGTAAGATTAAGCGGTGAAAGGGCTTTAGAAT TTGCCTTAAAGCTTAGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRKKAIIEAKAKKRILKKNPKKEFTSSKNHKPETHEPKQ ENKIETKNEKNKSQKEKYTVKSDEIFDSFHRESKGVRNTQDILDEIRIQLVKLLESSQFKIELSELRMYDEDCVLIRLDG EDAALMIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQNVIEKIKIHGRGQTKPLDGVLIKIALE QLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE
Sequences:
>Translated_272_residues MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRKKAIIEAKAKKRILKKNPKKEFTSSKNHKPETHEPKQ ENKIETKNEKNKSQKEKYTVKSDEIFDSFHRESKGVRNTQDILDEIRIQLVKLLESSQFKIELSELRMYDEDCVLIRLDG EDAALMIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQNVIEKIKIHGRGQTKPLDGVLIKIALE QLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE >Mature_272_residues MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRKKAIIEAKAKKRILKKNPKKEFTSSKNHKPETHEPKQ ENKIETKNEKNKSQKEKYTVKSDEIFDSFHRESKGVRNTQDILDEIRIQLVKLLESSQFKIELSELRMYDEDCVLIRLDG EDAALMIGKEAHRYKAISYLLHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQNVIEKIKIHGRGQTKPLDGVLIKIALE QLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31909; Mature: 31909
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRKKAIIEAKAKKRILKKN CCEEEHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC PKKEFTSSKNHKPETHEPKQENKIETKNEKNKSQKEKYTVKSDEIFDSFHRESKGVRNTQ CHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHH DILDEIRIQLVKLLESSQFKIELSELRMYDEDCVLIRLDGEDAALMIGKEAHRYKAISYL HHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHH LHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQNVIEKIKIHGRGQTKPLDGVLIKIALE HHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHH QLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE HHHHHCCHHEECCEECCCCEEEEEECCCCCCC >Mature Secondary Structure MKIEAIDLQSALTEASRSLECSVMDLEYEIIQHPRKGFFGFGRKKAIIEAKAKKRILKKN CCEEEHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC PKKEFTSSKNHKPETHEPKQENKIETKNEKNKSQKEKYTVKSDEIFDSFHRESKGVRNTQ CHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHH DILDEIRIQLVKLLESSQFKIELSELRMYDEDCVLIRLDGEDAALMIGKEAHRYKAISYL HHHHHHHHHHHHHHCCCCCEEEHHHHHCCCCCEEEEEECCCCEEEEECCHHHHHHHHHHH LHNWINLKYNLLVRLEIAQFLENQIQGMQLYLQNVIEKIKIHGRGQTKPLDGVLIKIALE HHHHHCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHH QLRAEFPDKYVGIKQNNDQRFVVINDFFKKDE HHHHHCCHHEECCEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA