Definition | Campylobacter jejuni RM1221, complete genome. |
---|---|
Accession | NC_003912 |
Length | 1,777,831 |
Click here to switch to the map view.
The map label for this gene is purL [H]
Identifier: 57237783
GI number: 57237783
Start: 972979
End: 975165
Strand: Reverse
Name: purL [H]
Synonym: CJE1035
Alternate gene names: 57237783
Gene position: 975165-972979 (Counterclockwise)
Preceding gene: 57237784
Following gene: 57237782
Centisome position: 54.85
GC content: 35.48
Gene sequence:
>2187_bases ATGGACAAAGAAACCATAAAAGCACACAAAATTAGCGATGAAGAATATACACAAATTTTAGAAATTTTAGGACGTGAGCC AAATTTATTAGAGCTTGGGGTTATTTCTGCGATGTGGAGTGAGCATTGCTCTTATAAATCTAGTAAAAAATATCTTAATG GTTTTCCAACTAAAGCACCTTGGGTGATTCAAGGCCCAGGTGAAAATGCAGGGGTTATTGATATCGGGCAAGGTATGGCA GCAGTTTTTAAAGTAGAAAGTCACAATCACCCTAGCTTTATTGAACCTTTTGCAGGTGCGGCTACAGGAGTAGGGGGAAT TTTACGTGATGTTTTTACTATGGGTGCAAGAGTGGTTGCAGGGCTAAATTCTTTAAAATTTGGCAATATTCATAATGAAA AATGCAGCAAACATCAAAAATACCTTGTTAAAGGTGTGGTAAATGGAATTTCTCATTATGGAAATTGCATGGGTGTGCCA ACTATAGGTGGAGAATGTGCTTTTGATGAGTGTTTTAATGGAAATATCTTAGTTAATGCCTTTGCTTTAGGGGTTTGTAA AAGTGAAGATATCTTTTATGCTAAGGCTGAAGGTGTAGGAAATCCTGTGATTTATGTGGGTTCAAAAACAGGGCGTGATG GACTTGGTGGAGCGGTTATGGCAAGTGATAGCTTCAATGAAGAAAGCAAATCTTTGCGTCCTACAGTGCAAATTGGCGAT CCTTTCAGTGAAAAACTTCTTATGGAAGCTTGTTTAGAGCTTTTTAAAACTGATTATATTGTGGGTATTCAAGATATGGG TGCTGCAGGGCTTACTTCAAGTTCTTTTGAAATGGCAGGAAGAAGTGGCAGTGGCATGAAACTTTACTTAGATAAAACTC CTATACGTGAAAGCGGTATGACTCCTTATGAGTTAATGCTTAGCGAGTCTCAAGAAAGAATGCTTATTTGTGCGAAAAAA GGCTATGAAGATAAGGTTATAGAAATTTTCAAAAAATGGGATTTAGATGCTGTGGTTATAGGTGAAGTTACCAATACAGG AAAAATGGAGCTTTTTTGGCATGATGAGCTTGTAGGGCTTATTCCTATCGAGCCTCTAAGTGAAAAAGCGCCGATTTTAA GTCGTCCTATAAGTGAGCCAAAATATTTAAGTGAAATTAAAGATTATAAATTTGAGTTAAAATTAAGCATTCAAGAGCTT TTTATACAAATGCTTCAAAATGAAAATATTAACAACAAAGCTTTTATTTATGATCAATTTGATTCAAGTGTGCAAACCAA TACTATAAAAGCTGATGGAAGATTAGGTGCTAGTGCCATTCGTATCAAAGAAAATGGTGCAAGTGTGGCTATGGCTATAG AATGTAACTCACGCTTAAATTATGTAAATCCTAAAATAGGAGCAGCTTTAGCAGTAGCTTCAGCAGGAAGAAAAGTTGCT TGCACGGGGGCTAAGCCTTTGGCAATAAGTGATTGTTTAAATTATGGAAATCCGCAAAATCCTGAAGTGATGTGGCAATT TGCACAAGGTTGCGAAGGCATTAAAGAAGCTTGTAAAGAGTTAAATACCCCAGTAGTAAGCGGCAATGTTTCACTTTATA ATGAAACTGAAGGCGTAAGTATTTATCCAAGTCCTACTATAGTAAGCGTAGGGGTTTTAGAAGATGCAAATAAAACCTTA AAAGCTAGTTTTGAAAAAGAAAATTTAAGTGTTTATCTTTTGGGTGAAAGTTTAGGGGAATTTGGTGGATCTATGGTAAT GAAAATCCAAGATAAAAAAGTATCAGGAAGTCTTAAAGAGCTTGATTATAAAGCTGAAATTGCACTTTGGGATTTGCTTT ATAAAGCCAATCAAAATTCTTTACTTGAGTGTGCCAATAGCGTAGGAATAGGGGGTATTGCTATGACTTTGGCAAAAATG TTTGCTATTTCTAGTGTAGGTGCAAATTTAACAAGTGGTTTTGATGATGAAAAAATGATTTTTGATGAGAGTGCAAGTCG TGCTATAGTAGGGCTTAGTAAAGAAAATGAAGAAGCTTTTTTAAATTTAGCCAAAGAATTTGGAGTAAAAGCTTATAAAT TAGGTGTGAGTACTAGCCAAAAACATTTTAAACTTGATAGCATTGAGTTAAGCAAGGCTGAACTTGATAAGCTTTATTTT GAAAGTTTTAAAGAGCAAATCCAATGA
Upstream 100 bases:
>100_bases GCGATTAATGAACTTGCAAGATTTACCAAAGATTTTCAAAGAGATGAAATTTTAGACGAAATGTTTGGTAATTTTTGTTT AGGAAAATGAAAGGATAAAA
Downstream 100 bases:
>100_bases CTTTAGTTTTAATTATACTCGTTGTTTTGGTGTTTTACTGGTATTATAAAACTTGGGGAAAACAGGATTTTTTAAACTCA GCTACAAGAGGAGCCAAAGG
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II [H]
Number of amino acids: Translated: 728; Mature: 728
Protein sequence:
>728_residues MDKETIKAHKISDEEYTQILEILGREPNLLELGVISAMWSEHCSYKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMA AVFKVESHNHPSFIEPFAGAATGVGGILRDVFTMGARVVAGLNSLKFGNIHNEKCSKHQKYLVKGVVNGISHYGNCMGVP TIGGECAFDECFNGNILVNAFALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGAVMASDSFNEESKSLRPTVQIGD PFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSFEMAGRSGSGMKLYLDKTPIRESGMTPYELMLSESQERMLICAKK GYEDKVIEIFKKWDLDAVVIGEVTNTGKMELFWHDELVGLIPIEPLSEKAPILSRPISEPKYLSEIKDYKFELKLSIQEL FIQMLQNENINNKAFIYDQFDSSVQTNTIKADGRLGASAIRIKENGASVAMAIECNSRLNYVNPKIGAALAVASAGRKVA CTGAKPLAISDCLNYGNPQNPEVMWQFAQGCEGIKEACKELNTPVVSGNVSLYNETEGVSIYPSPTIVSVGVLEDANKTL KASFEKENLSVYLLGESLGEFGGSMVMKIQDKKVSGSLKELDYKAEIALWDLLYKANQNSLLECANSVGIGGIAMTLAKM FAISSVGANLTSGFDDEKMIFDESASRAIVGLSKENEEAFLNLAKEFGVKAYKLGVSTSQKHFKLDSIELSKAELDKLYF ESFKEQIQ
Sequences:
>Translated_728_residues MDKETIKAHKISDEEYTQILEILGREPNLLELGVISAMWSEHCSYKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMA AVFKVESHNHPSFIEPFAGAATGVGGILRDVFTMGARVVAGLNSLKFGNIHNEKCSKHQKYLVKGVVNGISHYGNCMGVP TIGGECAFDECFNGNILVNAFALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGAVMASDSFNEESKSLRPTVQIGD PFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSFEMAGRSGSGMKLYLDKTPIRESGMTPYELMLSESQERMLICAKK GYEDKVIEIFKKWDLDAVVIGEVTNTGKMELFWHDELVGLIPIEPLSEKAPILSRPISEPKYLSEIKDYKFELKLSIQEL FIQMLQNENINNKAFIYDQFDSSVQTNTIKADGRLGASAIRIKENGASVAMAIECNSRLNYVNPKIGAALAVASAGRKVA CTGAKPLAISDCLNYGNPQNPEVMWQFAQGCEGIKEACKELNTPVVSGNVSLYNETEGVSIYPSPTIVSVGVLEDANKTL KASFEKENLSVYLLGESLGEFGGSMVMKIQDKKVSGSLKELDYKAEIALWDLLYKANQNSLLECANSVGIGGIAMTLAKM FAISSVGANLTSGFDDEKMIFDESASRAIVGLSKENEEAFLNLAKEFGVKAYKLGVSTSQKHFKLDSIELSKAELDKLYF ESFKEQIQ >Mature_728_residues MDKETIKAHKISDEEYTQILEILGREPNLLELGVISAMWSEHCSYKSSKKYLNGFPTKAPWVIQGPGENAGVIDIGQGMA AVFKVESHNHPSFIEPFAGAATGVGGILRDVFTMGARVVAGLNSLKFGNIHNEKCSKHQKYLVKGVVNGISHYGNCMGVP TIGGECAFDECFNGNILVNAFALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGAVMASDSFNEESKSLRPTVQIGD PFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSFEMAGRSGSGMKLYLDKTPIRESGMTPYELMLSESQERMLICAKK GYEDKVIEIFKKWDLDAVVIGEVTNTGKMELFWHDELVGLIPIEPLSEKAPILSRPISEPKYLSEIKDYKFELKLSIQEL FIQMLQNENINNKAFIYDQFDSSVQTNTIKADGRLGASAIRIKENGASVAMAIECNSRLNYVNPKIGAALAVASAGRKVA CTGAKPLAISDCLNYGNPQNPEVMWQFAQGCEGIKEACKELNTPVVSGNVSLYNETEGVSIYPSPTIVSVGVLEDANKTL KASFEKENLSVYLLGESLGEFGGSMVMKIQDKKVSGSLKELDYKAEIALWDLLYKANQNSLLECANSVGIGGIAMTLAKM FAISSVGANLTSGFDDEKMIFDESASRAIVGLSKENEEAFLNLAKEFGVKAYKLGVSTSQKHFKLDSIELSKAELDKLYF ESFKEQIQ
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family [H]
Homologues:
Organism=Escherichia coli, GI48994899, Length=787, Percent_Identity=23.7611181702668, Blast_Score=110, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17553022, Length=377, Percent_Identity=25.1989389920424, Blast_Score=75, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321498, Length=537, Percent_Identity=24.9534450651769, Blast_Score=101, Evalue=5e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 79266; Mature: 79266
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKETIKAHKISDEEYTQILEILGREPNLLELGVISAMWSEHCSYKSSKKYLNGFPTKAP CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHHHCCCCCCCC WVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAATGVGGILRDVFTMGARVVA EEEECCCCCCCEEECCCCCEEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHH GLNSLKFGNIHNEKCSKHQKYLVKGVVNGISHYGNCMGVPTIGGECAFDECFNGNILVNA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCEEEEE FALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGAVMASDSFNEESKSLRPTVQIGD EEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCHHCCCCEEEECC PFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSFEMAGRSGSGMKLYLDKTPIRESGM CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCC TPYELMLSESQERMLICAKKGYEDKVIEIFKKWDLDAVVIGEVTNTGKMELFWHDELVGL CHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCEEEE IPIEPLSEKAPILSRPISEPKYLSEIKDYKFELKLSIQELFIQMLQNENINNKAFIYDQF ECCCCCCCCCCHHHCCCCCCHHHHHHHCCEEEEEEEHHHHHHHHHHCCCCCCEEEEEECC DSSVQTNTIKADGRLGASAIRIKENGASVAMAIECNSRLNYVNPKIGAALAVASAGRKVA CCCCCCCEEEECCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEE CTGAKPLAISDCLNYGNPQNPEVMWQFAQGCEGIKEACKELNTPVVSGNVSLYNETEGVS ECCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCEE IYPSPTIVSVGVLEDANKTLKASFEKENLSVYLLGESLGEFGGSMVMKIQDKKVSGSLKE ECCCCCEEEEEEECCCCCHHEECCCCCCCEEEEEECHHHHCCCEEEEEEECCCCCCCHHH LDYKAEIALWDLLYKANQNSLLECANSVGIGGIAMTLAKMFAISSVGANLTSGFDDEKMI CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEE FDESASRAIVGLSKENEEAFLNLAKEFGVKAYKLGVSTSQKHFKLDSIELSKAELDKLYF ECCCCCCEEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEECCEECCHHHHHHHHH ESFKEQIQ HHHHHHCC >Mature Secondary Structure MDKETIKAHKISDEEYTQILEILGREPNLLELGVISAMWSEHCSYKSSKKYLNGFPTKAP CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHHHCCCCCCCC WVIQGPGENAGVIDIGQGMAAVFKVESHNHPSFIEPFAGAATGVGGILRDVFTMGARVVA EEEECCCCCCCEEECCCCCEEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHH GLNSLKFGNIHNEKCSKHQKYLVKGVVNGISHYGNCMGVPTIGGECAFDECFNGNILVNA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCEEEEE FALGVCKSEDIFYAKAEGVGNPVIYVGSKTGRDGLGGAVMASDSFNEESKSLRPTVQIGD EEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCHHCCCCEEEECC PFSEKLLMEACLELFKTDYIVGIQDMGAAGLTSSSFEMAGRSGSGMKLYLDKTPIRESGM CHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCC TPYELMLSESQERMLICAKKGYEDKVIEIFKKWDLDAVVIGEVTNTGKMELFWHDELVGL CHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCEEEE IPIEPLSEKAPILSRPISEPKYLSEIKDYKFELKLSIQELFIQMLQNENINNKAFIYDQF ECCCCCCCCCCHHHCCCCCCHHHHHHHCCEEEEEEEHHHHHHHHHHCCCCCCEEEEEECC DSSVQTNTIKADGRLGASAIRIKENGASVAMAIECNSRLNYVNPKIGAALAVASAGRKVA CCCCCCCEEEECCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEE CTGAKPLAISDCLNYGNPQNPEVMWQFAQGCEGIKEACKELNTPVVSGNVSLYNETEGVS ECCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCEE IYPSPTIVSVGVLEDANKTLKASFEKENLSVYLLGESLGEFGGSMVMKIQDKKVSGSLKE ECCCCCEEEEEEECCCCCHHEECCCCCCCEEEEEECHHHHCCCEEEEEEECCCCCCCHHH LDYKAEIALWDLLYKANQNSLLECANSVGIGGIAMTLAKMFAISSVGANLTSGFDDEKMI CCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCEE FDESASRAIVGLSKENEEAFLNLAKEFGVKAYKLGVSTSQKHFKLDSIELSKAELDKLYF ECCCCCCEEEEECCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEECCEECCHHHHHHHHH ESFKEQIQ HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA