Definition | Campylobacter jejuni RM1221, complete genome. |
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Accession | NC_003912 |
Length | 1,777,831 |
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The map label for this gene is 57237683
Identifier: 57237683
GI number: 57237683
Start: 867495
End: 867980
Strand: Direct
Name: 57237683
Synonym: CJE0929
Alternate gene names: NA
Gene position: 867495-867980 (Clockwise)
Preceding gene: 57237677
Following gene: 57237687
Centisome position: 48.8
GC content: 25.93
Gene sequence:
>486_bases ATGAAAATTTATAGTGTAATTTTAGGTGCTTTTTTGCTTGGAGCTTGTTCTTTAAAAGATCAGGCGATTGTGGATACAAA TTTAAAATCTCAAACTTTAATGTTTACTCAAAAATATAAAATCACACAAGATAAGATTAATGCCATTATAACCATGTCTT ATTTAAACCCAATCCTAGATAAGACAAGTAAAGATGATATATTGGCCTTGTCTTTTACCCCAAATACATTAAAAATTCAA AATTTAGAAGTTTTTATCAATAATAAAAAAGCCAATATTGAAAAATTAGATGATGAGTATTTAAAATATATAATACAAAA CAACTATACTGATTATTTTAAAGTATCTCTTCCTAGTGTCAAGGAAGAGACTAAGCTTGTAGCTAAGATTTGTTTAGATC ATTTGCCTTGTTTTGAATTAAATTTTCAAAAATATCCGAAATCTTTATACTATCGTTCAGAAGATGTCGATACACAATAT AATTAG
Upstream 100 bases:
>100_bases TTCATAAAATATACTCTTAATTTTTTTGTAAAATTATATCTTTTTAAACCAAAAAATAGGGTTAAAAGGCTACAATAATA CTAAAAAATATGGAAAAAGA
Downstream 100 bases:
>100_bases CTAGAACTTTTTTTCCGTAAATTCGGCTTTCTTGATAAGGAACTAGCTCCATAGACAAGAAAGGTTCAAATTTGCCTGTC TTAAACATATCATTTCTTGC
Product: lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKIYSVILGAFLLGACSLKDQAIVDTNLKSQTLMFTQKYKITQDKINAIITMSYLNPILDKTSKDDILALSFTPNTLKIQ NLEVFINNKKANIEKLDDEYLKYIIQNNYTDYFKVSLPSVKEETKLVAKICLDHLPCFELNFQKYPKSLYYRSEDVDTQY N
Sequences:
>Translated_161_residues MKIYSVILGAFLLGACSLKDQAIVDTNLKSQTLMFTQKYKITQDKINAIITMSYLNPILDKTSKDDILALSFTPNTLKIQ NLEVFINNKKANIEKLDDEYLKYIIQNNYTDYFKVSLPSVKEETKLVAKICLDHLPCFELNFQKYPKSLYYRSEDVDTQY N >Mature_161_residues MKIYSVILGAFLLGACSLKDQAIVDTNLKSQTLMFTQKYKITQDKINAIITMSYLNPILDKTSKDDILALSFTPNTLKIQ NLEVFINNKKANIEKLDDEYLKYIIQNNYTDYFKVSLPSVKEETKLVAKICLDHLPCFELNFQKYPKSLYYRSEDVDTQY N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18689; Mature: 18689
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYSVILGAFLLGACSLKDQAIVDTNLKSQTLMFTQKYKITQDKINAIITMSYLNPILD CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHEEEEHHHHHHHHC KTSKDDILALSFTPNTLKIQNLEVFINNKKANIEKLDDEYLKYIIQNNYTDYFKVSLPSV CCCCCCEEEEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC KEETKLVAKICLDHLPCFELNFQKYPKSLYYRSEDVDTQYN HHHHHHHHHHHHHCCCCEECCHHHCCHHHEECCCCCCCCCC >Mature Secondary Structure MKIYSVILGAFLLGACSLKDQAIVDTNLKSQTLMFTQKYKITQDKINAIITMSYLNPILD CHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECCCCCHHHHHEEEEHHHHHHHHC KTSKDDILALSFTPNTLKIQNLEVFINNKKANIEKLDDEYLKYIIQNNYTDYFKVSLPSV CCCCCCEEEEEECCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC KEETKLVAKICLDHLPCFELNFQKYPKSLYYRSEDVDTQYN HHHHHHHHHHHHHCCCCEECCHHHCCHHHEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA