| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is thiP [C]
Identifier: 57237032
GI number: 57237032
Start: 763394
End: 764233
Strand: Direct
Name: thiP [C]
Synonym: CJE0830
Alternate gene names: 57237032
Gene position: 763394-764233 (Clockwise)
Preceding gene: 57237031
Following gene: 57237033
Centisome position: 42.94
GC content: 29.17
Gene sequence:
>840_bases ATGAAAGAAAAATTTCTAGCCTTTTTAAGTATTTTACCTTTTTTTATAGTTTTTACTTTTTTTATGATAGCGCCTTTGAT TTGGATTGTTTTTAATGCTTTTTATGTAGAAGAGGATGAAATTTATTCTTTAGCCAATTTTATACATATTTTTGAGTCCA AATTCTATCTACAAAGCATTATAAATTCTTTACAAATCAGTTTTATTTCTAGTATTTTTGGACTTTTAATAGGGCTTTTG GCGAGCTATTCTTTATTTATTTTAGCTCCATCAAAAATATGTAATTTTCTCTTTTCTTTAAATACTATGATAAGTAATTT TTCAGGAGTTCCTTTAGCTTTTGCTTTCATTATAGTTCTTGGAAGCAATGGTGTAGTTAATGTGTTTTTGAAGAATTTAG GTATAGAGCCTTTTGTTAGTGTTTATGCTAATTTCGGGGTAAATATTGTTTATGTGTATTTTCAAATTCCTTTGGCGATC TTGCTTTTGCTTCCAGCTTTTAAAAGTCTTGAAAATTCACATTTAAATGCTTGTAAAATGTTAGGTGGAGGCAATTTTTT ATATTGGTTAAAAATAGCTTTGCCTTTGCTCGCTCCTGCTTTGTTTGGTGTTTTTGTGATTTTATTTGCCAATGCTTTTG GAGCTTATGCGACTATTTATGCTTTAAGTTCGGGAAATTTTAATGTCGCTCCTGTAAGAATCGCTGCTTTAATCGCAGGC GATATCAATCTTGATCCTTATATGGCTAGTGCTTTAAGTATCATTATAACTATTATCATGCTTGTTGTTACCTTTATGGC CAATTTCCTTTCTAAAAAATATAATTTTAAGGTGCTTTAA
Upstream 100 bases:
>100_bases ATGCCAAGATAAAACAGGATGAAATTTGTGGCAGTGTCTGTGAAATTTTAGGACTTAAACACGATAAGAGATATAATGAT GAAATTTTAAAGGCCAAAAA
Downstream 100 bases:
>100_bases ATGAATGAAAATTTGAGTTTAAAAGCTAAAATTTATCATTATGCAGTTTTGTTTTTGGTTTTTTTGTTTTTAGCTTTGCC TTTAATGGCTACTTTTTTAT
Product: ABC transporter permease
Products: ADP; phosphate; thiamine [Cytoplasm] [C]
Alternate protein names: ABC Transporter Permease Protein; Transmembrane Component Of ABC Transporter; ABC Transporter; Permease Of ABC Transporter; ABC Transporter Membrane Spanning Protein; Polyamine ABC Transporter Permease Protein; Permease; Sulfate ABC Transporter Permease Protein; ABC-Type Transporter Permease Component; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component; Spermidine/Putrescine ABC Transporter Permease Protein
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSLANFIHIFESKFYLQSIINSLQISFISSIFGLLIGLL ASYSLFILAPSKICNFLFSLNTMISNFSGVPLAFAFIIVLGSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAI LLLLPAFKSLENSHLNACKMLGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYATIYALSSGNFNVAPVRIAALIAG DINLDPYMASALSIIITIIMLVVTFMANFLSKKYNFKVL
Sequences:
>Translated_279_residues MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSLANFIHIFESKFYLQSIINSLQISFISSIFGLLIGLL ASYSLFILAPSKICNFLFSLNTMISNFSGVPLAFAFIIVLGSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAI LLLLPAFKSLENSHLNACKMLGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYATIYALSSGNFNVAPVRIAALIAG DINLDPYMASALSIIITIIMLVVTFMANFLSKKYNFKVL >Mature_279_residues MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSLANFIHIFESKFYLQSIINSLQISFISSIFGLLIGLL ASYSLFILAPSKICNFLFSLNTMISNFSGVPLAFAFIIVLGSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAI LLLLPAFKSLENSHLNACKMLGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYATIYALSSGNFNVAPVRIAALIAG DINLDPYMASALSIIITIIMLVVTFMANFLSKKYNFKVL
Specific function: Part Of The Binding-Protein-Dependent Transport System Tbpa-Thipq For Thiamine And Tpp. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]
COG id: COG4132
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30998; Mature: 30998
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSLANFIHIFESKFYLQSI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH INSLQISFISSIFGLLIGLLASYSLFILAPSKICNFLFSLNTMISNFSGVPLAFAFIIVL HHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAILLLLPAFKSLENSHLNACKM CCCCHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYATIYALSSGNFNVAPVRIAALIAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHC DINLDPYMASALSIIITIIMLVVTFMANFLSKKYNFKVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKEKFLAFLSILPFFIVFTFFMIAPLIWIVFNAFYVEEDEIYSLANFIHIFESKFYLQSI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH INSLQISFISSIFGLLIGLLASYSLFILAPSKICNFLFSLNTMISNFSGVPLAFAFIIVL HHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GSNGVVNVFLKNLGIEPFVSVYANFGVNIVYVYFQIPLAILLLLPAFKSLENSHLNACKM CCCCHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH LGGGNFLYWLKIALPLLAPALFGVFVILFANAFGAYATIYALSSGNFNVAPVRIAALIAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHC DINLDPYMASALSIIITIIMLVVTFMANFLSKKYNFKVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; thiamine [Periplasm]; H2O [C]
Specific reaction: ATP + thiamine [Periplasm] + H2O = ADP + phosphate + thiamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA