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The map label for this gene is potC [C]

Identifier: 57237033

GI number: 57237033

Start: 764234

End: 765013

Strand: Direct

Name: potC [C]

Synonym: CJE0831

Alternate gene names: 57237033

Gene position: 764234-765013 (Clockwise)

Preceding gene: 57237032

Following gene: 57237034

Centisome position: 42.99

GC content: 30.13

Gene sequence:

>780_bases
ATGAATGAAAATTTGAGTTTAAAAGCTAAAATTTATCATTATGCAGTTTTGTTTTTGGTTTTTTTGTTTTTAGCTTTGCC
TTTAATGGCTACTTTTTTATATTCTATTTCCACTTCTTGGGGTGTAAGTGTTTTGCCTGATGATCTTACGCTTAAATGGT
ATCAAGAACTTTTTCATGACGAAAGATTTTTACTTGCTCTTTGGCATTCTTTGCTTGTTTGTGTGGGCAGTATTTTACTT
TCTGTGATTCTTGTTTTTCCTTTGGTTTTTGTGCTAAATTATTATTTTTTAAAATTAAAAGCCTTTGTAAATATACTTAT
TATCATGCCTTTTGCTGTACCTCCTATAGTTAGCTGTGTGGGGCTTTTGCAACTTTATGCTGACAATATAGGAGGCACAG
CTTGGATGCTCATTTTTACTTATTTTACTATAGCTTTGCCTTTTATATATAGGGCTTTAGATAATGCTATGTCTAATGTC
AATTTAAATGAACTCATCGCATCTAATGCTATGCTTGGAGGTTCTTTAATGGGAGCGATTTTTAAGCTTGTCTTGCCTAA
TTTAAGAAATGGAATTTTGGTGGCAGTTTTTTTAAGTTTTTCTTTTTTAATAGGCGAATTTTTATACGCAAATATTCTTG
TAGGAAGTGCTTATGAGACTTTGCAAGTTTATCTTTATAATATCAAAAATCAAAGTGGGCATTATTCTAGTGCTTTGGTA
ATAGTTTATTTTGTGTTAATTTTTATAACAACTTTTATAGCTAGTTTGATTAAGGAGTAA

Upstream 100 bases:

>100_bases
TATGGCTAGTGCTTTAAGTATCATTATAACTATTATCATGCTTGTTGTTACCTTTATGGCCAATTTCCTTTCTAAAAAAT
ATAATTTTAAGGTGCTTTAA

Downstream 100 bases:

>100_bases
AAAATGGCTTATTTAAAGATTAAAAATTTTAAAAAAGCTTATGGGGATAAAATTATTTTTGAAGATATTAATTTTAGTGC
TAAAAAAGGGTGAGTTTATA

Product: ABC transporter permease

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease; Transmembrane Component Of ABC Transporter; Permease Of ABC Transporter; ABC Transporter; ABC-Type Transporter Permease Component; ABC Transporter Membrane Spanning Protein; Polyamine ABC Transporter Permease Protein; Spermidine/Putrescine ABC Transporter Permease; ABC Transporter Inner Membrane Subunit; ABC Transporter Membrane Protein; ABC-Type Iron(III) Transport System Permease Component; ABC Transport System Permease Protein; ABC-Type Transport System Permease Protein; Spermidine/Putrescine ABC Transporter Permease Component; ABC Transporter Integral Membrane Subunit; ABC Transport System Permease Component; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNENLSLKAKIYHYAVLFLVFLFLALPLMATFLYSISTSWGVSVLPDDLTLKWYQELFHDERFLLALWHSLLVCVGSILL
SVILVFPLVFVLNYYFLKLKAFVNILIIMPFAVPPIVSCVGLLQLYADNIGGTAWMLIFTYFTIALPFIYRALDNAMSNV
NLNELIASNAMLGGSLMGAIFKLVLPNLRNGILVAVFLSFSFLIGEFLYANILVGSAYETLQVYLYNIKNQSGHYSSALV
IVYFVLIFITTFIASLIKE

Sequences:

>Translated_259_residues
MNENLSLKAKIYHYAVLFLVFLFLALPLMATFLYSISTSWGVSVLPDDLTLKWYQELFHDERFLLALWHSLLVCVGSILL
SVILVFPLVFVLNYYFLKLKAFVNILIIMPFAVPPIVSCVGLLQLYADNIGGTAWMLIFTYFTIALPFIYRALDNAMSNV
NLNELIASNAMLGGSLMGAIFKLVLPNLRNGILVAVFLSFSFLIGEFLYANILVGSAYETLQVYLYNIKNQSGHYSSALV
IVYFVLIFITTFIASLIKE
>Mature_259_residues
MNENLSLKAKIYHYAVLFLVFLFLALPLMATFLYSISTSWGVSVLPDDLTLKWYQELFHDERFLLALWHSLLVCVGSILL
SVILVFPLVFVLNYYFLKLKAFVNILIIMPFAVPPIVSCVGLLQLYADNIGGTAWMLIFTYFTIALPFIYRALDNAMSNV
NLNELIASNAMLGGSLMGAIFKLVLPNLRNGILVAVFLSFSFLIGEFLYANILVGSAYETLQVYLYNIKNQSGHYSSALV
IVYFVLIFITTFIASLIKE

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29194; Mature: 29194

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENLSLKAKIYHYAVLFLVFLFLALPLMATFLYSISTSWGVSVLPDDLTLKWYQELFHD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCC
ERFLLALWHSLLVCVGSILLSVILVFPLVFVLNYYFLKLKAFVNILIIMPFAVPPIVSCV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLQLYADNIGGTAWMLIFTYFTIALPFIYRALDNAMSNVNLNELIASNAMLGGSLMGAI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FKLVLPNLRNGILVAVFLSFSFLIGEFLYANILVGSAYETLQVYLYNIKNQSGHYSSALV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH
IVYFVLIFITTFIASLIKE
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNENLSLKAKIYHYAVLFLVFLFLALPLMATFLYSISTSWGVSVLPDDLTLKWYQELFHD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHCC
ERFLLALWHSLLVCVGSILLSVILVFPLVFVLNYYFLKLKAFVNILIIMPFAVPPIVSCV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLLQLYADNIGGTAWMLIFTYFTIALPFIYRALDNAMSNVNLNELIASNAMLGGSLMGAI
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FKLVLPNLRNGILVAVFLSFSFLIGEFLYANILVGSAYETLQVYLYNIKNQSGHYSSALV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHH
IVYFVLIFITTFIASLIKE
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA