| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237031
Identifier: 57237031
GI number: 57237031
Start: 762591
End: 763397
Strand: Direct
Name: 57237031
Synonym: CJE0829
Alternate gene names: NA
Gene position: 762591-763397 (Clockwise)
Preceding gene: 57237030
Following gene: 57237032
Centisome position: 42.89
GC content: 31.35
Gene sequence:
>807_bases ATGTCCAAAGTTATTTTAGTTGTGCTTGATGGCTTAAATTGTAAAAGCGCTAGTATAAATATGGGATATTTAAATGCACT TTGCAAAGAGAATTTAGGCAAATTTTATTCTTTAGAATGCGAACTTCCTAGTATGTCTCGTCCTTTATACGAGTGCTTAT TAACAGGCGTAAAGCCTGTTTTAAGTGAGATAATTAATAATAAATTGAGTTTTTCAAAACAAACAAGCATTTTTGACCTT TGCAAAGAACAAGGCTTAAAAGCTGGAGGCGCAGCTTATCATTGGGTTTTTGAGCTTTATAATAAAAAAGAATTTATTCC TTCTTTACATCGCCACATAGAAGATGAAAATTTAACTTTGCCTTATGGACATTTTTATTATGAAGATGATTATTTAGATT CTCATTTATTTGCAGATGGGGAGCATTTAAGAAACAAATATAATCTAGATTTTACTCTTATACATTCTATGAATATAGAT GATGCAGGACATAAATTTGGCTCACACTCTATCGAGTATGCTAATAAAACCAAAAAAGTTGATAATTTGATTTCTGAGTA TTTGCCTACTTGGTTAGAACAAGGTATTAATGTAATCATCACAAGCGATCATGGTATGACAGAGGGTAAAAGTCATGGAG GCTTAAGCGAAGATGAAATTTTAGTGCCTTTTTTCACTTTTGGTAGTGCTTTTTCGTATGAAAATGCCAAGATAAAACAG GATGAAATTTGTGGCAGTGTCTGTGAAATTTTAGGACTTAAACACGATAAGAGATATAATGATGAAATTTTAAAGGCCAA AAAATGA
Upstream 100 bases:
>100_bases ATGACAATAACTTTCCTTATTCTTCAAGTAGAGAACCTAATAAAACTGATGATAATGAATTTATTTTACTTGAAGTAAAA GATTTTTTAAAGAGTAAATG
Downstream 100 bases:
>100_bases AAGAAAAATTTCTAGCCTTTTTAAGTATTTTACCTTTTTTTATAGTTTTTACTTTTTTTATGATAGCGCCTTTGATTTGG ATTGTTTTTAATGCTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSKVILVVLDGLNCKSASINMGYLNALCKENLGKFYSLECELPSMSRPLYECLLTGVKPVLSEIINNKLSFSKQTSIFDL CKEQGLKAGGAAYHWVFELYNKKEFIPSLHRHIEDENLTLPYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNID DAGHKFGSHSIEYANKTKKVDNLISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSEDEILVPFFTFGSAFSYENAKIKQ DEICGSVCEILGLKHDKRYNDEILKAKK
Sequences:
>Translated_268_residues MSKVILVVLDGLNCKSASINMGYLNALCKENLGKFYSLECELPSMSRPLYECLLTGVKPVLSEIINNKLSFSKQTSIFDL CKEQGLKAGGAAYHWVFELYNKKEFIPSLHRHIEDENLTLPYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNID DAGHKFGSHSIEYANKTKKVDNLISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSEDEILVPFFTFGSAFSYENAKIKQ DEICGSVCEILGLKHDKRYNDEILKAKK >Mature_267_residues SKVILVVLDGLNCKSASINMGYLNALCKENLGKFYSLECELPSMSRPLYECLLTGVKPVLSEIINNKLSFSKQTSIFDLC KEQGLKAGGAAYHWVFELYNKKEFIPSLHRHIEDENLTLPYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNIDD AGHKFGSHSIEYANKTKKVDNLISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSEDEILVPFFTFGSAFSYENAKIKQD EICGSVCEILGLKHDKRYNDEILKAKK
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI71987692, Length=231, Percent_Identity=25.1082251082251, Blast_Score=64, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71987687, Length=231, Percent_Identity=25.1082251082251, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30467; Mature: 30336
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVILVVLDGLNCKSASINMGYLNALCKENLGKFYSLECELPSMSRPLYECLLTGVKPV CCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH LSEIINNKLSFSKQTSIFDLCKEQGLKAGGAAYHWVFELYNKKEFIPSLHRHIEDENLTL HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE PYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNIDDAGHKFGSHSIEYANKTKKV CCCCEEEECCCCCCHHCCCCHHHHHCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHH DNLISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSEDEILVPFFTFGSAFSYENAKIKQ HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCH DEICGSVCEILGLKHDKRYNDEILKAKK HHHHHHHHHHHCCCCCCCCCHHHHHCCC >Mature Secondary Structure SKVILVVLDGLNCKSASINMGYLNALCKENLGKFYSLECELPSMSRPLYECLLTGVKPV CCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH LSEIINNKLSFSKQTSIFDLCKEQGLKAGGAAYHWVFELYNKKEFIPSLHRHIEDENLTL HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE PYGHFYYEDDYLDSHLFADGEHLRNKYNLDFTLIHSMNIDDAGHKFGSHSIEYANKTKKV CCCCEEEECCCCCCHHCCCCHHHHHCCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHH DNLISEYLPTWLEQGINVIITSDHGMTEGKSHGGLSEDEILVPFFTFGSAFSYENAKIKQ HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCH DEICGSVCEILGLKHDKRYNDEILKAKK HHHHHHHHHHHCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA