| Definition | Campylobacter jejuni RM1221, complete genome. |
|---|---|
| Accession | NC_003912 |
| Length | 1,777,831 |
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The map label for this gene is 57237030
Identifier: 57237030
GI number: 57237030
Start: 761266
End: 762591
Strand: Direct
Name: 57237030
Synonym: CJE0828
Alternate gene names: NA
Gene position: 761266-762591 (Clockwise)
Preceding gene: 57237029
Following gene: 57237031
Centisome position: 42.82
GC content: 28.13
Gene sequence:
>1326_bases ATGAAAAAGGTTATTTTAACAAGTGCTATGCTTTGCAGTGTTTTATTTGGAGTTCAAGAGTATGAGGCCAATTTAGCAGG GCATATTATCATAGATTCTAAAAGTACAGTAAAACCTCCTAAGGATGCTCCTGATTTTTTTAAAACTTATGGGAAATTTG CAAATATCACTAGAGAAGAAAAAATTGGAACTTTTAAATCTAAGGGAAACAGGGAAACAGATTTTTATTTACCTTTTAAA AATCAACCTATACAAGGACATAGTGGGATAAAATATATTCCAAAAAAAGATGTTTTTTGGGTAATTAGCGATAATGGCTT GGGTAAAAAGTATAATTCTTATGATTCTATGCTTTATGCTCACGAGTTTAAATTTGATTTTAAAAACTCAAAATACGAAC TTTTAAAAACAGTTTTTTTTAAAGATAGTGATAAAAAATGCCCCTATCCTATAACCACCGAAACAACTAAAGAAAGGTAT TTAAGTGGGGCTGATTTTGATACTGAGAGTATACAGGTTATCAATGATGAATTTTATATAGGTGATGAATTTGGTCCTTA TTTGCTTCATTTTGATAAGAATGGGAATTTGAAAGAAGTTTTTGATGTGTATGTGGAGGGTAAAAAACTTATTTCTCCTG ATAATCCAAGTTTAAAATTTAGCGATAAGCCTGATGGAGAAAATGAGAAATTTAATATCAAGCGTTCTAAAGGCTTTGAA GCTATGGCAAGCTCTAAAGATGGTTCTAAACTTTATTTGCTTTTAGAAGGAAGCATTTATAATAACAACGCTTATGAGAA TGAAAAAGGTAAAGAATATCTAAGAATCATAGAATTTGATGTAAAAAATAAAAAATTCACTGGAAAAACTTATAAATATT TCTTAGAAGATAAAAGCCATTCCATAGGTGATTTTAATATGATAGATGATAAATACGGCATCATCATAGAAAGAGATCAA AAAGAAGGCACTAAAGATAAGGCTTGCAAAGAAGGTGAAGATACTAAGCATTGTTTTAATAATGTAGCTCAATTCAAAAG AATTTATAAGGTTAAATTAGATGATAAAACTCATGAAGCTCAAAAAATTTCTTATATAGATCTTTTAAATATTAAGGATA GAAATAAAATTTCTAAAAAGCCTTTGGTAAATGATAAATTTGTTTTTCCTTTTGAAACCATAGAAGGTGTGGATATAGTA GATGACTCTCATATAGTTGTAGAAAATGACAATAACTTTCCTTATTCTTCAAGTAGAGAACCTAATAAAACTGATGATAA TGAATTTATTTTACTTGAAGTAAAAGATTTTTTAAAGAGTAAATGA
Upstream 100 bases:
>100_bases AGAGCAATCAAAGATCAAAAAGCTTGGGAAAAAAGCGCTAAAGAACTACCACAACTTTGGCAAGAAAAAGTTATAGTGGA TATGAAATAAAGGAGATTGG
Downstream 100 bases:
>100_bases TGTCCAAAGTTATTTTAGTTGTGCTTGATGGCTTAAATTGTAAAAGCGCTAGTATAAATATGGGATATTTAAATGCACTT TGCAAAGAGAATTTAGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Signal Peptide; Periplasmic Protein; Glycerophosphoryl Diester Phosphodiesterase Family; PEP-CTERM Exosortase Interaction Domain Protein
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MKKVILTSAMLCSVLFGVQEYEANLAGHIIIDSKSTVKPPKDAPDFFKTYGKFANITREEKIGTFKSKGNRETDFYLPFK NQPIQGHSGIKYIPKKDVFWVISDNGLGKKYNSYDSMLYAHEFKFDFKNSKYELLKTVFFKDSDKKCPYPITTETTKERY LSGADFDTESIQVINDEFYIGDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPSLKFSDKPDGENEKFNIKRSKGFE AMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRIIEFDVKNKKFTGKTYKYFLEDKSHSIGDFNMIDDKYGIIIERDQ KEGTKDKACKEGEDTKHCFNNVAQFKRIYKVKLDDKTHEAQKISYIDLLNIKDRNKISKKPLVNDKFVFPFETIEGVDIV DDSHIVVENDNNFPYSSSREPNKTDDNEFILLEVKDFLKSK
Sequences:
>Translated_441_residues MKKVILTSAMLCSVLFGVQEYEANLAGHIIIDSKSTVKPPKDAPDFFKTYGKFANITREEKIGTFKSKGNRETDFYLPFK NQPIQGHSGIKYIPKKDVFWVISDNGLGKKYNSYDSMLYAHEFKFDFKNSKYELLKTVFFKDSDKKCPYPITTETTKERY LSGADFDTESIQVINDEFYIGDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPSLKFSDKPDGENEKFNIKRSKGFE AMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRIIEFDVKNKKFTGKTYKYFLEDKSHSIGDFNMIDDKYGIIIERDQ KEGTKDKACKEGEDTKHCFNNVAQFKRIYKVKLDDKTHEAQKISYIDLLNIKDRNKISKKPLVNDKFVFPFETIEGVDIV DDSHIVVENDNNFPYSSSREPNKTDDNEFILLEVKDFLKSK >Mature_441_residues MKKVILTSAMLCSVLFGVQEYEANLAGHIIIDSKSTVKPPKDAPDFFKTYGKFANITREEKIGTFKSKGNRETDFYLPFK NQPIQGHSGIKYIPKKDVFWVISDNGLGKKYNSYDSMLYAHEFKFDFKNSKYELLKTVFFKDSDKKCPYPITTETTKERY LSGADFDTESIQVINDEFYIGDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPSLKFSDKPDGENEKFNIKRSKGFE AMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRIIEFDVKNKKFTGKTYKYFLEDKSHSIGDFNMIDDKYGIIIERDQ KEGTKDKACKEGEDTKHCFNNVAQFKRIYKVKLDDKTHEAQKISYIDLLNIKDRNKISKKPLVNDKFVFPFETIEGVDIV DDSHIVVENDNNFPYSSSREPNKTDDNEFILLEVKDFLKSK
Specific function: Unknown
COG id: COG4222
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51082; Mature: 51082
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVILTSAMLCSVLFGVQEYEANLAGHIIIDSKSTVKPPKDAPDFFKTYGKFANITREE CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHH KIGTFKSKGNRETDFYLPFKNQPIQGHSGIKYIPKKDVFWVISDNGLGKKYNSYDSMLYA HCCCHHCCCCCCCEEEECCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCHHCEEEE HEFKFDFKNSKYELLKTVFFKDSDKKCPYPITTETTKERYLSGADFDTESIQVINDEFYI EEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCEEEE GDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPSLKFSDKPDGENEKFNIKRSKGFE CCCCCCEEEEECCCCCHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCCEEEEECCCCCH AMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRIIEFDVKNKKFTGKTYKYFLEDKSH HHHCCCCCCEEEEEEECEEECCCCCCCCCCCEEEEEEEEECCCCEECCCEEEEEEECCCC SIGDFNMIDDKYGIIIERDQKEGTKDKACKEGEDTKHCFNNVAQFKRIYKVKLDDKTHEA CCCCCEEECCCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCH QKISYIDLLNIKDRNKISKKPLVNDKFVFPFETIEGVDIVDDSHIVVENDNNFPYSSSRE HEEEEEEEECCCCCCCCCCCCCCCCCEEECHHCCCCCEEECCCEEEEECCCCCCCCCCCC PNKTDDNEFILLEVKDFLKSK CCCCCCCCEEEEEEHHHHCCC >Mature Secondary Structure MKKVILTSAMLCSVLFGVQEYEANLAGHIIIDSKSTVKPPKDAPDFFKTYGKFANITREE CCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCHHH KIGTFKSKGNRETDFYLPFKNQPIQGHSGIKYIPKKDVFWVISDNGLGKKYNSYDSMLYA HCCCHHCCCCCCCEEEECCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCHHCEEEE HEFKFDFKNSKYELLKTVFFKDSDKKCPYPITTETTKERYLSGADFDTESIQVINDEFYI EEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCEEEE GDEFGPYLLHFDKNGNLKEVFDVYVEGKKLISPDNPSLKFSDKPDGENEKFNIKRSKGFE CCCCCCEEEEECCCCCHHHHHHHHCCCCEEECCCCCCEEECCCCCCCCCEEEEECCCCCH AMASSKDGSKLYLLLEGSIYNNNAYENEKGKEYLRIIEFDVKNKKFTGKTYKYFLEDKSH HHHCCCCCCEEEEEEECEEECCCCCCCCCCCEEEEEEEEECCCCEECCCEEEEEEECCCC SIGDFNMIDDKYGIIIERDQKEGTKDKACKEGEDTKHCFNNVAQFKRIYKVKLDDKTHEA CCCCCEEECCCCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCH QKISYIDLLNIKDRNKISKKPLVNDKFVFPFETIEGVDIVDDSHIVVENDNNFPYSSSRE HEEEEEEEECCCCCCCCCCCCCCCCCEEECHHCCCCCEEECCCEEEEECCCCCCCCCCCC PNKTDDNEFILLEVKDFLKSK CCCCCCCCEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA