Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226913
Identifier: 21226913
GI number: 21226913
Start: 961781
End: 961960
Strand: Reverse
Name: 21226913
Synonym: MM_0811
Alternate gene names: NA
Gene position: 961960-961781 (Counterclockwise)
Preceding gene: 21226914
Following gene: 21226900
Centisome position: 23.48
GC content: 43.89
Gene sequence:
>180_bases ATGAAGAAACTGTACAGGTCAAAAAGAAACAAGATTATTGCCGGAGTATGTGGGGGTATAGGCGAGTACCTCGGCGTGGA TCCTACGCTAGTAAGGCTTTTATGGGTGCTACTTTCTTTGCAGGGAATTGGGATAATCGGTTATGTCATAGCCTGGATCA TAATTCCTGAAGAGCCTTAA
Upstream 100 bases:
>100_bases TAATCAATTATATACGGGAAATCAGGCAAAATTCGGAACAACCAAAAAATCTGATATCCTTCAGATGACTCAGGTATTTT TCTGGAGTGGAGGCACTGAT
Downstream 100 bases:
>100_bases AATCCGGAAGCTTTCATATTTCTGAATTTCTTCTTCCCTTTTTCATATTTCTGAATTTCTTCTTCCCTTTTTTATATTTC TGAATTTTTTCTTCCCTTTT
Product: stress-responsive transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 59; Mature: 59
Protein sequence:
>59_residues MKKLYRSKRNKIIAGVCGGIGEYLGVDPTLVRLLWVLLSLQGIGIIGYVIAWIIIPEEP
Sequences:
>Translated_59_residues MKKLYRSKRNKIIAGVCGGIGEYLGVDPTLVRLLWVLLSLQGIGIIGYVIAWIIIPEEP >Mature_59_residues MKKLYRSKRNKIIAGVCGGIGEYLGVDPTLVRLLWVLLSLQGIGIIGYVIAWIIIPEEP
Specific function: Unknown
COG id: COG1983
COG function: function code KT; Putative stress-responsive transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6538; Mature: 6538
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLYRSKRNKIIAGVCGGIGEYLGVDPTLVRLLWVLLSLQGIGIIGYVIAWIIIPEEP CCHHHHHHHCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKKLYRSKRNKIIAGVCGGIGEYLGVDPTLVRLLWVLLSLQGIGIIGYVIAWIIIPEEP CCHHHHHHHCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA