Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226914
Identifier: 21226914
GI number: 21226914
Start: 962203
End: 963249
Strand: Reverse
Name: 21226914
Synonym: MM_0812
Alternate gene names: NA
Gene position: 963249-962203 (Counterclockwise)
Preceding gene: 21226915
Following gene: 21226913
Centisome position: 23.51
GC content: 45.37
Gene sequence:
>1047_bases ATGGCTGCAGTTCTTTTTTTCTGGCCTTTTTCTGAGGGATCCGCAGTTTCTGGCAACAAAAAGATAGATAAAAACCTGCC TCGAGAAACGGGTGGTAATTATAACTCTTCTGAGGCTCTGGTTACGGAAGAACTCATAGAACCAGGGAAATCTTCCAGAT CTTACTCATGGAATTATGAGGGATACCGGTGGCACCTTACTCTGCTGCTTGATGATAAGCTGTACAGTGCATATGAGTCA AGGACACGCAAAAGAGACTACGACCTTTTTGCTTCCGACCCTTATGATGACTGGTTAATAAAGAATATCGCAGATACGCT TGTTTCTCTTTCAAATGAATACGGGCTTGAAGAAAAAAAAATACCCGGGCTCTGTGTTTCTTTTATCCAGTCCCTTAACT ATACTTCAGACCTTACAAGTTCTGGATATGACCAGTACCCCCGTTTTCCTTATGAGACTCTCTTCGATAACGGGGGGGAC TGTGAGGATACCTCCATCCTGTCGGTGGCAATTCTTCAGGAAATGGGCTATGATGTTGTCCTGCTGGAACTTCCGGAGCA TATGGCTCTGGGAATAAAATGCAGCCCTGAAACCAGGGGTAGGAGCTTTGAATACAATAATAATCATTATTACTACCTTG AAACTACAGGGAGCAACTGGGAGATCGGGGAAATGCCTGAAGAATATGAGGATGAACCGGTAGAAGTTATCCCTGTATAT AGGAGGCCCCTTGTTAACCTTGATTTCAGTGCTCAGTGCGAATACTCCCAGAAAGAAGGGGTTGTGGACGTTAATGTTAC TCTGAGAAATGTGGGCTCCGAGGTAGCAGAAAATACAACTGTTTATGTTGCCCTTCAGGCAGAGGACGGGAGTAAAATAT GGGACCAGATCGAGAGCGACCCTGTAATAATCGAGCCTGAGGGAGCCTATCAGTTCACCGCAAAAGGACTCAGAGTCCCT GGAGGCAGGACCTTCAGGGTATATGTGAGAGCTCTCGGGGAAAACCTGTTCTCTGAAGAAATTACGAGTGAATGGGTGAG TATCTGA
Upstream 100 bases:
>100_bases GGGAAGATCTCTGGAAATAAAGTTTTATTAAGATATTTCTGGACGGAAGTAAACCATGAAAGCTAGAATTAAACTGACTT TTATTTTCTTACTCGTATAT
Downstream 100 bases:
>100_bases TGGAAATTGTGGAGTATCTAATATAAATGGGAAGTATCTGATAGAAACGTTTCCCCTTATTCATGCACAGGGCTAAGCGC ACAGGGTTAAAAACTGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAAVLFFWPFSEGSAVSGNKKIDKNLPRETGGNYNSSEALVTEELIEPGKSSRSYSWNYEGYRWHLTLLLDDKLYSAYES RTRKRDYDLFASDPYDDWLIKNIADTLVSLSNEYGLEEKKIPGLCVSFIQSLNYTSDLTSSGYDQYPRFPYETLFDNGGD CEDTSILSVAILQEMGYDVVLLELPEHMALGIKCSPETRGRSFEYNNNHYYYLETTGSNWEIGEMPEEYEDEPVEVIPVY RRPLVNLDFSAQCEYSQKEGVVDVNVTLRNVGSEVAENTTVYVALQAEDGSKIWDQIESDPVIIEPEGAYQFTAKGLRVP GGRTFRVYVRALGENLFSEEITSEWVSI
Sequences:
>Translated_348_residues MAAVLFFWPFSEGSAVSGNKKIDKNLPRETGGNYNSSEALVTEELIEPGKSSRSYSWNYEGYRWHLTLLLDDKLYSAYES RTRKRDYDLFASDPYDDWLIKNIADTLVSLSNEYGLEEKKIPGLCVSFIQSLNYTSDLTSSGYDQYPRFPYETLFDNGGD CEDTSILSVAILQEMGYDVVLLELPEHMALGIKCSPETRGRSFEYNNNHYYYLETTGSNWEIGEMPEEYEDEPVEVIPVY RRPLVNLDFSAQCEYSQKEGVVDVNVTLRNVGSEVAENTTVYVALQAEDGSKIWDQIESDPVIIEPEGAYQFTAKGLRVP GGRTFRVYVRALGENLFSEEITSEWVSI >Mature_347_residues AAVLFFWPFSEGSAVSGNKKIDKNLPRETGGNYNSSEALVTEELIEPGKSSRSYSWNYEGYRWHLTLLLDDKLYSAYESR TRKRDYDLFASDPYDDWLIKNIADTLVSLSNEYGLEEKKIPGLCVSFIQSLNYTSDLTSSGYDQYPRFPYETLFDNGGDC EDTSILSVAILQEMGYDVVLLELPEHMALGIKCSPETRGRSFEYNNNHYYYLETTGSNWEIGEMPEEYEDEPVEVIPVYR RPLVNLDFSAQCEYSQKEGVVDVNVTLRNVGSEVAENTTVYVALQAEDGSKIWDQIESDPVIIEPEGAYQFTAKGLRVPG GRTFRVYVRALGENLFSEEITSEWVSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39610; Mature: 39479
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVLFFWPFSEGSAVSGNKKIDKNLPRETGGNYNSSEALVTEELIEPGKSSRSYSWNYE CEEEEEEEECCCCCCCCCCCCHHHCCCHHCCCCCCCCCHHHHHHHHCCCCCCCCEEECCC GYRWHLTLLLDDKLYSAYESRTRKRDYDLFASDPYDDWLIKNIADTLVSLSNEYGLEEKK CEEEEEEEEECCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC IPGLCVSFIQSLNYTSDLTSSGYDQYPRFPYETLFDNGGDCEDTSILSVAILQEMGYDVV CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCEE LLELPEHMALGIKCSPETRGRSFEYNNNHYYYLETTGSNWEIGEMPEEYEDEPVEVIPVY EEECCCHHEEEEEECCCCCCCCEEECCCEEEEEEECCCCCCCCCCCHHHCCCCEEEEEEC RRPLVNLDFSAQCEYSQKEGVVDVNVTLRNVGSEVAENTTVYVALQAEDGSKIWDQIESD CCCEECCCCCCCCCCCCCCCEEEEEEEHHHHCHHHHCCCEEEEEEECCCCCHHHHHHCCC PVIIEPEGAYQFTAKGLRVPGGRTFRVYVRALGENLFSEEITSEWVSI CEEECCCCCEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAVLFFWPFSEGSAVSGNKKIDKNLPRETGGNYNSSEALVTEELIEPGKSSRSYSWNYE EEEEEEEECCCCCCCCCCCCHHHCCCHHCCCCCCCCCHHHHHHHHCCCCCCCCEEECCC GYRWHLTLLLDDKLYSAYESRTRKRDYDLFASDPYDDWLIKNIADTLVSLSNEYGLEEKK CEEEEEEEEECCHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC IPGLCVSFIQSLNYTSDLTSSGYDQYPRFPYETLFDNGGDCEDTSILSVAILQEMGYDVV CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCEE LLELPEHMALGIKCSPETRGRSFEYNNNHYYYLETTGSNWEIGEMPEEYEDEPVEVIPVY EEECCCHHEEEEEECCCCCCCCEEECCCEEEEEEECCCCCCCCCCCHHHCCCCEEEEEEC RRPLVNLDFSAQCEYSQKEGVVDVNVTLRNVGSEVAENTTVYVALQAEDGSKIWDQIESD CCCEECCCCCCCCCCCCCCCEEEEEEEHHHHCHHHHCCCEEEEEEECCCCCHHHHHHCCC PVIIEPEGAYQFTAKGLRVPGGRTFRVYVRALGENLFSEEITSEWVSI CEEECCCCCEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA