Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226892
Identifier: 21226892
GI number: 21226892
Start: 943728
End: 944087
Strand: Reverse
Name: 21226892
Synonym: MM_0790
Alternate gene names: NA
Gene position: 944087-943728 (Counterclockwise)
Preceding gene: 21226894
Following gene: 21226891
Centisome position: 23.05
GC content: 43.33
Gene sequence:
>360_bases TTGCTTGCAGTTTCTTTTATTGCTGGTGTGATTCTTATAGGGCTCTATGGAGTTGACTCTTCGGAAAGATACATCGCAGT ATCTGAGCTCCTCGCCAATCCCCAGGACTACTCCGGGCAGAATATAAATGCTATGGGAGTTGTAGAAGACAGGAGCCTTC ATAAAGACCCCGGTGTGACATCATTCGACCTGAAAGATGAAAACGATGAAAACCTTAAGATACATGTAAATTATGTAGGG AACTTACCTTCCAACCTTGCTGAAGGAAAACAGGTGACCATCAGAGGATCAATGATTTCCGAATCTACCTTTGAGGCAAA TAAGATAGTTACCGGATGCCCGTCAAAGTACACGGAGTAA
Upstream 100 bases:
>100_bases TACCTCCTTTCGCTATTCAGGACATATGCAGAGCTTAACAAAAGGTTAATGTAATGATTGAGTCATACGGGATTTTAGTA TGAATAAAAAAAAGAAATCA
Downstream 100 bases:
>100_bases TACTGATGAATATTGAAGAATGGGAAGAATACAGATATGTAGAAGCCGGAATAAAAGAATCTATCACTCTTATAGAGGAT CCTGGCTTAAAAAAAATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MLAVSFIAGVILIGLYGVDSSERYIAVSELLANPQDYSGQNINAMGVVEDRSLHKDPGVTSFDLKDENDENLKIHVNYVG NLPSNLAEGKQVTIRGSMISESTFEANKIVTGCPSKYTE
Sequences:
>Translated_119_residues MLAVSFIAGVILIGLYGVDSSERYIAVSELLANPQDYSGQNINAMGVVEDRSLHKDPGVTSFDLKDENDENLKIHVNYVG NLPSNLAEGKQVTIRGSMISESTFEANKIVTGCPSKYTE >Mature_119_residues MLAVSFIAGVILIGLYGVDSSERYIAVSELLANPQDYSGQNINAMGVVEDRSLHKDPGVTSFDLKDENDENLKIHVNYVG NLPSNLAEGKQVTIRGSMISESTFEANKIVTGCPSKYTE
Specific function: Unknown
COG id: COG2332
COG function: function code O; Cytochrome c-type biogenesis protein CcmE
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12911; Mature: 12911
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVSFIAGVILIGLYGVDSSERYIAVSELLANPQDYSGQNINAMGVVEDRSLHKDPGVT CCHHHHHHHHHHHHEECCCCCCCEEEEHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCE SFDLKDENDENLKIHVNYVGNLPSNLAEGKQVTIRGSMISESTFEANKIVTGCPSKYTE EEECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCC >Mature Secondary Structure MLAVSFIAGVILIGLYGVDSSERYIAVSELLANPQDYSGQNINAMGVVEDRSLHKDPGVT CCHHHHHHHHHHHHEECCCCCCCEEEEHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCE SFDLKDENDENLKIHVNYVGNLPSNLAEGKQVTIRGSMISESTFEANKIVTGCPSKYTE EEECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA