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The map label for this gene is atpC [H]

Identifier: 21226884

GI number: 21226884

Start: 935047

End: 936129

Strand: Reverse

Name: atpC [H]

Synonym: MM_0782

Alternate gene names: 21226884

Gene position: 936129-935047 (Counterclockwise)

Preceding gene: 21226885

Following gene: 21226883

Centisome position: 22.85

GC content: 42.11

Gene sequence:

>1083_bases
ATGCGGCTTTTGGAGAATCTCTGGGGGAAAAAACCCTCACGAAAATCCGATAAAAAGAAAAAGGGCAGTTCAAACTATGC
TTATGCCGTAACCCGTGTCCGCGCGATGAAAAGTAAGTTGCTCCCTAAAGAATCGTATCCCCGGCTTCTCAACATGGGAA
TCGATGAAATTACCCGCTTTATCCAAGAGTCTGAATACAAAAACGACGTTGACGAACTGGCAATGAAATACAGTGGTGGC
GACCTGGCAGAACACGCATTGAACAGGAATCTTGCGCTCACTTATGATAAGTTGGTAAGAATTACCTCCGGAGAATTAAA
TTATCTGATTGTCGCATATCTGAAAAGATACGACATCTGGAACATTAAAACACTTCTCCGTGGGAAAATCTACAACGCAT
CTGTTGAAGATATCCTGGAATCTCTTATTGCTGCCGGGGAGTTTACTTACACTTCTATGTCAGAACTTGCAGCCAAGGCC
ACATATCAGGAAATCGTTGAGGCCCTGAAACATACTGAGTACTATCCCCTGCTGCAGAAGTTTGACGGAACTAACCTAGC
ATACATAGAAAACGAACTTGACAAGATATATTATGCAGACTTGTTTGAAGCAATCGGGAAACCAAGATCTAAGGACCGTA
AGCTTTTCGCTCAGGTTGTCAGATTGGAAGTAGACGTTAAGAATCTAATCAACCTGTTCAGGCTGAAAAAAGCAGGTGTT
ATGCAGCCTGATGAAATCATGCCTCTCATGATTGAAGGTGGTCTCGAGCTAAAGATCGAGAAACTGGCAGCTCTACCATA
TGACGAATTTGTCAATGAGCTTCAAAGAACTCAATACTGGGAAGCGATTTCAGGCGTTGTAGGTCCGGATATGATTTCTC
TGACTACCCTTGAAAGCAGGCTCACTAGATATTATCTTGAATCTTCAACAATTCTTTCGCATGTATCTCCGATCACAGTT
GTACCTATTCTGGACTATATCATTCATAAAAATAATGAGGCTACAAATCTCCGGATCATTTTCAGGGGTAAAGAGACTGG
CCTCAGTGATGAGTTAATCAAAGACCAGTTGGTGATTATCTAA

Upstream 100 bases:

>100_bases
CAGGACAGTCAGGTTAGATTTCACATACGATTCAATCCTGAAAAGCGTTTATGAACGTTCATTGAAGCAGATATCTGATA
TATTATACGGGTGATGTTCG

Downstream 100 bases:

>100_bases
TGGAGTTAGCAGTGATCGGAAAGAGCGAATTCGTTACAGGGTTCAGGCTGGCCGGCATCAGTAAGGTTTATGAAACCCCT
GATATCCCGGCTACTGAGTC

Product: V-type ATP synthase subunit C

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit C [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MRLLENLWGKKPSRKSDKKKKGSSNYAYAVTRVRAMKSKLLPKESYPRLLNMGIDEITRFIQESEYKNDVDELAMKYSGG
DLAEHALNRNLALTYDKLVRITSGELNYLIVAYLKRYDIWNIKTLLRGKIYNASVEDILESLIAAGEFTYTSMSELAAKA
TYQEIVEALKHTEYYPLLQKFDGTNLAYIENELDKIYYADLFEAIGKPRSKDRKLFAQVVRLEVDVKNLINLFRLKKAGV
MQPDEIMPLMIEGGLELKIEKLAALPYDEFVNELQRTQYWEAISGVVGPDMISLTTLESRLTRYYLESSTILSHVSPITV
VPILDYIIHKNNEATNLRIIFRGKETGLSDELIKDQLVII

Sequences:

>Translated_360_residues
MRLLENLWGKKPSRKSDKKKKGSSNYAYAVTRVRAMKSKLLPKESYPRLLNMGIDEITRFIQESEYKNDVDELAMKYSGG
DLAEHALNRNLALTYDKLVRITSGELNYLIVAYLKRYDIWNIKTLLRGKIYNASVEDILESLIAAGEFTYTSMSELAAKA
TYQEIVEALKHTEYYPLLQKFDGTNLAYIENELDKIYYADLFEAIGKPRSKDRKLFAQVVRLEVDVKNLINLFRLKKAGV
MQPDEIMPLMIEGGLELKIEKLAALPYDEFVNELQRTQYWEAISGVVGPDMISLTTLESRLTRYYLESSTILSHVSPITV
VPILDYIIHKNNEATNLRIIFRGKETGLSDELIKDQLVII
>Mature_360_residues
MRLLENLWGKKPSRKSDKKKKGSSNYAYAVTRVRAMKSKLLPKESYPRLLNMGIDEITRFIQESEYKNDVDELAMKYSGG
DLAEHALNRNLALTYDKLVRITSGELNYLIVAYLKRYDIWNIKTLLRGKIYNASVEDILESLIAAGEFTYTSMSELAAKA
TYQEIVEALKHTEYYPLLQKFDGTNLAYIENELDKIYYADLFEAIGKPRSKDRKLFAQVVRLEVDVKNLINLFRLKKAGV
MQPDEIMPLMIEGGLELKIEKLAALPYDEFVNELQRTQYWEAISGVVGPDMISLTTLESRLTRYYLESSTILSHVSPITV
VPILDYIIHKNNEATNLRIIFRGKETGLSDELIKDQLVII

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG1527

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase V0D/AC39 subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014272
- InterPro:   IPR002843 [H]

Pfam domain/function: PF01992 vATP-synt_AC39 [H]

EC number: 3.6.3.14

Molecular weight: Translated: 41358; Mature: 41358

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLENLWGKKPSRKSDKKKKGSSNYAYAVTRVRAMKSKLLPKESYPRLLNMGIDEITRF
CCHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH
IQESEYKNDVDELAMKYSGGDLAEHALNRNLALTYDKLVRITSGELNYLIVAYLKRYDIW
HHHHHHCCCHHHHHHHCCCCHHHHHHHCCCEEEEHHHHHEECCCCCHHHHHHHHHHCCCH
NIKTLLRGKIYNASVEDILESLIAAGEFTYTSMSELAAKATYQEIVEALKHTEYYPLLQK
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FDGTNLAYIENELDKIYYADLFEAIGKPRSKDRKLFAQVVRLEVDVKNLINLFRLKKAGV
CCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MQPDEIMPLMIEGGLELKIEKLAALPYDEFVNELQRTQYWEAISGVVGPDMISLTTLESR
CCCHHCCCEEECCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LTRYYLESSTILSHVSPITVVPILDYIIHKNNEATNLRIIFRGKETGLSDELIKDQLVII
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MRLLENLWGKKPSRKSDKKKKGSSNYAYAVTRVRAMKSKLLPKESYPRLLNMGIDEITRF
CCHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHH
IQESEYKNDVDELAMKYSGGDLAEHALNRNLALTYDKLVRITSGELNYLIVAYLKRYDIW
HHHHHHCCCHHHHHHHCCCCHHHHHHHCCCEEEEHHHHHEECCCCCHHHHHHHHHHCCCH
NIKTLLRGKIYNASVEDILESLIAAGEFTYTSMSELAAKATYQEIVEALKHTEYYPLLQK
HHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
FDGTNLAYIENELDKIYYADLFEAIGKPRSKDRKLFAQVVRLEVDVKNLINLFRLKKAGV
CCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MQPDEIMPLMIEGGLELKIEKLAALPYDEFVNELQRTQYWEAISGVVGPDMISLTTLESR
CCCHHCCCEEECCCCEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LTRYYLESSTILSHVSPITVVPILDYIIHKNNEATNLRIIFRGKETGLSDELIKDQLVII
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA