Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is atpE
Identifier: 21226885
GI number: 21226885
Start: 936136
End: 936687
Strand: Reverse
Name: atpE
Synonym: MM_0783
Alternate gene names: 21226885
Gene position: 936687-936136 (Counterclockwise)
Preceding gene: 21226886
Following gene: 21226884
Centisome position: 22.87
GC content: 41.67
Gene sequence:
>552_bases ATGGGACTAGAGATCGTTGTAAAAGACATCCAAGAGGGTGCAAGAGCTGAGGTTTCCCGTATTAAAGCCGAAGGCGATGC AAAGGCCTCCGAGATAATTAATGAAGCTAAAGAAATTCAGAAGAAGACGCTCGGAGACAGCCTTGCCAAGGCGGAAGAGG ACCTCCAAAGTCTGCACCAGCAGGTCATATCAAGTGCAAACCTGGAAGTTAAAAGAATTACGCTTAACAAGCGTAAGGAA CTTCTAGATACCGTTTATAACCAGACAGTTGAAAATATTAAGTCAATGCCGGCATCCAAAAAAGAAGAGCTGTTAAAAAG TATTCTCGACAAGCATGAAGCTAGCGGCGCTAGAGCTTATTCTTCTAAGGAGTCAGAAGAGCTTGTTAAGAAGTTAACTT CTCTATCTTATGCTGGCAATATAGATTCTATTGGCGGAATTGTTCTGGAAAACGAGGACAGGACAGTCAGGTTAGATTTC ACATACGATTCAATCCTGAAAAGCGTTTATGAACGTTCATTGAAGCAGATATCTGATATATTATACGGGTGA
Upstream 100 bases:
>100_bases TCTAAGTTCCCCTTAGGTATCGTTGCACTCTAAGCAGCTTAGAGTTTTGCTCTAGGCTTTAGAGCACTTTTTTGCTCTAA ATTTATTTGGAGGTGTAAGC
Downstream 100 bases:
>100_bases TGTTCGATGCGGCTTTTGGAGAATCTCTGGGGGAAAAAACCCTCACGAAAATCCGATAAAAAGAAAAAGGGCAGTTCAAA CTATGCTTATGCCGTAACCC
Product: V-type ATP synthase subunit E
Products: ADP; phosphate; H+
Alternate protein names: V-ATPase subunit E
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MGLEIVVKDIQEGARAEVSRIKAEGDAKASEIINEAKEIQKKTLGDSLAKAEEDLQSLHQQVISSANLEVKRITLNKRKE LLDTVYNQTVENIKSMPASKKEELLKSILDKHEASGARAYSSKESEELVKKLTSLSYAGNIDSIGGIVLENEDRTVRLDF TYDSILKSVYERSLKQISDILYG
Sequences:
>Translated_183_residues MGLEIVVKDIQEGARAEVSRIKAEGDAKASEIINEAKEIQKKTLGDSLAKAEEDLQSLHQQVISSANLEVKRITLNKRKE LLDTVYNQTVENIKSMPASKKEELLKSILDKHEASGARAYSSKESEELVKKLTSLSYAGNIDSIGGIVLENEDRTVRLDF TYDSILKSVYERSLKQISDILYG >Mature_182_residues GLEIVVKDIQEGARAEVSRIKAEGDAKASEIINEAKEIQKKTLGDSLAKAEEDLQSLHQQVISSANLEVKRITLNKRKEL LDTVYNQTVENIKSMPASKKEELLKSILDKHEASGARAYSSKESEELVKKLTSLSYAGNIDSIGGIVLENEDRTVRLDFT YDSILKSVYERSLKQISDILYG
Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane
COG id: COG1390
COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the V-ATPase E subunit family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): VATE_METMA (Q60183)
Other databases:
- EMBL: U47274 - EMBL: AE008384 - PIR: T45104 - RefSeq: NP_632807.1 - ProteinModelPortal: Q60183 - GeneID: 1479125 - GenomeReviews: AE008384_GR - KEGG: mma:MM_0783 - NMPDR: fig|192952.1.peg.783 - HOGENOM: HBG732751 - OMA: RVRVNNT - ProtClustDB: PRK02292 - BioCyc: MMAZ192952:MM0783-MONOMER - BRENDA: 3.6.3.14 - HAMAP: MF_00311 - InterPro: IPR002842
Pfam domain/function: PF01991 vATP-synt_E
EC number: 3.6.3.14
Molecular weight: Translated: 20386; Mature: 20255
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLEIVVKDIQEGARAEVSRIKAEGDAKASEIINEAKEIQKKTLGDSLAKAEEDLQSLHQ CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVISSANLEVKRITLNKRKELLDTVYNQTVENIKSMPASKKEELLKSILDKHEASGARAY HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH SSKESEELVKKLTSLSYAGNIDSIGGIVLENEDRTVRLDFTYDSILKSVYERSLKQISDI CCCHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHH LYG HCC >Mature Secondary Structure GLEIVVKDIQEGARAEVSRIKAEGDAKASEIINEAKEIQKKTLGDSLAKAEEDLQSLHQ CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVISSANLEVKRITLNKRKELLDTVYNQTVENIKSMPASKKEELLKSILDKHEASGARAY HHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH SSKESEELVKKLTSLSYAGNIDSIGGIVLENEDRTVRLDFTYDSILKSVYERSLKQISDI CCCHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHH LYG HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; H+
Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8702544; 12125824