Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226845
Identifier: 21226845
GI number: 21226845
Start: 889945
End: 890310
Strand: Reverse
Name: 21226845
Synonym: MM_0743
Alternate gene names: NA
Gene position: 890310-889945 (Counterclockwise)
Preceding gene: 21226846
Following gene: 21226842
Centisome position: 21.73
GC content: 44.26
Gene sequence:
>366_bases ATGCCATTCATGGATGAAATACTGCCTGAAACTGCTGAAGCATTCGGAAAACTGAGAAGTTCTATCTTTGAAGGTGGAGA ACTTGACCGCAAAACCAAGGAACTTATAGCCGTTGCCTCCTCAGTCCTGATGCGTTGCCAGTACTGTGTTGATGTTCATT CTCAAAGAGCTGTTGCTAATGGAGCAAGCAAAAAAGAAGTTGCAGAAGCCATTGCTGTTGCCATGTTTATAGCCGGAGGC TCTCAGCTTAACTGGGCGAATAACTACGGCGAAAACGTTTATGATATCATCTTTAAGGAGAAAAAACCCCTGGAGTCCGG AAAAGAGAAATCGGATGAAGAGAAAGGCTGCTGCTGCGGTAAATAA
Upstream 100 bases:
>100_bases CATAGTGCTGAATAAGGCGTAACCTGAATATCAACTAAACTTGGTATATGACTCTCCTTCTTTTATAAACTGAAATCGTA TTATTGAGCGGAGGAATAAA
Downstream 100 bases:
>100_bases ATAACGGGCTAAGGCTTTGAGTTCGTTTTATCAATTGATTTTCAATCTGTTCTATTTTTTGCTTTTTTCCCATGTCTAAT CTCATCAGAACTTGAACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Alkylhydroperoxidase-Like Protein; Alkylhydroperoxidase; 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein; Carboxymuconolactone Decarboxylase
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MPFMDEILPETAEAFGKLRSSIFEGGELDRKTKELIAVASSVLMRCQYCVDVHSQRAVANGASKKEVAEAIAVAMFIAGG SQLNWANNYGENVYDIIFKEKKPLESGKEKSDEEKGCCCGK
Sequences:
>Translated_121_residues MPFMDEILPETAEAFGKLRSSIFEGGELDRKTKELIAVASSVLMRCQYCVDVHSQRAVANGASKKEVAEAIAVAMFIAGG SQLNWANNYGENVYDIIFKEKKPLESGKEKSDEEKGCCCGK >Mature_120_residues PFMDEILPETAEAFGKLRSSIFEGGELDRKTKELIAVASSVLMRCQYCVDVHSQRAVANGASKKEVAEAIAVAMFIAGGS QLNWANNYGENVYDIIFKEKKPLESGKEKSDEEKGCCCGK
Specific function: Unknown
COG id: COG0599
COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13257; Mature: 13126
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFMDEILPETAEAFGKLRSSIFEGGELDRKTKELIAVASSVLMRCQYCVDVHSQRAVAN CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GASKKEVAEAIAVAMFIAGGSQLNWANNYGENVYDIIFKEKKPLESGKEKSDEEKGCCCG CCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC K C >Mature Secondary Structure PFMDEILPETAEAFGKLRSSIFEGGELDRKTKELIAVASSVLMRCQYCVDVHSQRAVAN CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GASKKEVAEAIAVAMFIAGGSQLNWANNYGENVYDIIFKEKKPLESGKEKSDEEKGCCCG CCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA