Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226846

Identifier: 21226846

GI number: 21226846

Start: 890396

End: 891985

Strand: Reverse

Name: 21226846

Synonym: MM_0744

Alternate gene names: NA

Gene position: 891985-890396 (Counterclockwise)

Preceding gene: 21226847

Following gene: 21226845

Centisome position: 21.78

GC content: 42.58

Gene sequence:

>1590_bases
TTGAAAAATAAAATACATGATCGGTTTTATTCGACAATTTACGGGGAACTACAACCGCAAATTCTTTTTAACAATGTCAC
AGAAGGGCTTGTGTATAAAACTATACGGTCTCCATGTTTATCTCCACGCAGTTTACTTCCGGTGACAGACACTATTTTTG
ATTCCGGTCCAGGCAGGCGTGCGGGAGATGCCCTGAAAATTTTTGACAGCCTTGGATTCTGTGAAGCAGCGTCTCTTTCC
TCTGTTCATTATCACGGACAGCAACGGCAGGCAGGGTCACTTTACATCTGCAGGCTTATACCAATGGTTAAATGTACCTA
TCAAATATCAATGGATATAAAAACGGATGATGCCCGCAGTTTTATCGAACTTAACAGCCCGGGTTCAAAACTGGTAATTA
AGGAAGTAAATAACAGGGTTTTATTAATAAGTTATTTCGAAAGTTCTTCAGGCGACATCAGGTCCGAGACCATAACTCTG
GGGAACTCCTCTGAGAAACTGGACTTCGAAATTGCGTTTGACGGGTGCAGCAAAACAAACACAATATCTACCAGAGATGG
CAAATCCATTGTGACCCCCTTTTATAATTTCGAGAGGCAAAGGCTTCCTTATGTGGATTTCTCAAACGGGTATCTGAAAT
TCACATCCTTTATCACCGGAAAAGGAAGGTACATGGACATCAGCATCTACAATCTAAACCAGATAGCAGACCGAAAATTA
GTAACCTCTGTCGGAGACTCCAGGCTGATTCCTTTCGGAATTGACGGTCCTCATGTAAGGAATACAACAGAGCAGGGAAT
ACGTTATCTTAACAGCAAAAATAACAGAGGCACGATCTGGTTTGATATAGATCTCCTTGAGCAGTGCAGCGAGTCAGACA
TTGAGTACCTGCGAAGTCTGGTTTTTGATAATTCCTGGGATACCGGGGTACATTATTCTAAAGAATTGAACGCCTTCCCG
CCTGAAGAGGCTTATAAGATTATGGACGAGGGCTATTCATATGTTTATGAGAAAATCGGGCAAAAACCTACAGGCTGGTG
CTCGATGAGAAACAAGGATAATATTAAGCATGCCATTTATGCCTATGAAAACCTGGGGATGTTCTGGAGAAACGGAGACT
CTGGAGTTCATGCGGAAAAAAACGTTGGAAACCTGGATGACAACACATGGGAGTGGTGGGAATCTGCTTCAAAAGCGGGT
ATGGCGTACCCTTCTTTTACTCATGAACTTGACCTTGATCCGGCTATAAAATATTCGATAAGCCGCTCGAAATTCCTCAA
CTGGGTCGATACTTACAATTCAAATGGTGCCTCAATAGTCTCTTTTTATGAGTACGGTCAGATAAGCCGTAACACCCATG
AAGCCCGATTTGATATCCTTCAGCATACTGACAACTCTGTCATTTTCATCGCACACACAAACGGCTGCGACGCCCTGGCA
AATGTAAATATAATGGCTGAAAAAGGCACAGGGGTCTACGATAATACCTCAGAAAAATCCCTTGACTACAGGGTAGATCA
GGACAAATCGGTTACTTTCAGGGTTGAAAACAAACATACCTACAGCGTATATCTGCATAGTGCTGAATAA

Upstream 100 bases:

>100_bases
ATCAAGTCCCAAAAACATTGATCAGGGTAGTATTACCCTGTTTTCACAGGATTTTTCCAAAATTCACAGCGTCCCGGATA
ATATTTTTATTGCAAAACTT

Downstream 100 bases:

>100_bases
GGCGTAACCTGAATATCAACTAAACTTGGTATATGACTCTCCTTCTTTTATAAACTGAAATCGTATTATTGAGCGGAGGA
ATAAAATGCCATTCATGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MKNKIHDRFYSTIYGELQPQILFNNVTEGLVYKTIRSPCLSPRSLLPVTDTIFDSGPGRRAGDALKIFDSLGFCEAASLS
SVHYHGQQRQAGSLYICRLIPMVKCTYQISMDIKTDDARSFIELNSPGSKLVIKEVNNRVLLISYFESSSGDIRSETITL
GNSSEKLDFEIAFDGCSKTNTISTRDGKSIVTPFYNFERQRLPYVDFSNGYLKFTSFITGKGRYMDISIYNLNQIADRKL
VTSVGDSRLIPFGIDGPHVRNTTEQGIRYLNSKNNRGTIWFDIDLLEQCSESDIEYLRSLVFDNSWDTGVHYSKELNAFP
PEEAYKIMDEGYSYVYEKIGQKPTGWCSMRNKDNIKHAIYAYENLGMFWRNGDSGVHAEKNVGNLDDNTWEWWESASKAG
MAYPSFTHELDLDPAIKYSISRSKFLNWVDTYNSNGASIVSFYEYGQISRNTHEARFDILQHTDNSVIFIAHTNGCDALA
NVNIMAEKGTGVYDNTSEKSLDYRVDQDKSVTFRVENKHTYSVYLHSAE

Sequences:

>Translated_529_residues
MKNKIHDRFYSTIYGELQPQILFNNVTEGLVYKTIRSPCLSPRSLLPVTDTIFDSGPGRRAGDALKIFDSLGFCEAASLS
SVHYHGQQRQAGSLYICRLIPMVKCTYQISMDIKTDDARSFIELNSPGSKLVIKEVNNRVLLISYFESSSGDIRSETITL
GNSSEKLDFEIAFDGCSKTNTISTRDGKSIVTPFYNFERQRLPYVDFSNGYLKFTSFITGKGRYMDISIYNLNQIADRKL
VTSVGDSRLIPFGIDGPHVRNTTEQGIRYLNSKNNRGTIWFDIDLLEQCSESDIEYLRSLVFDNSWDTGVHYSKELNAFP
PEEAYKIMDEGYSYVYEKIGQKPTGWCSMRNKDNIKHAIYAYENLGMFWRNGDSGVHAEKNVGNLDDNTWEWWESASKAG
MAYPSFTHELDLDPAIKYSISRSKFLNWVDTYNSNGASIVSFYEYGQISRNTHEARFDILQHTDNSVIFIAHTNGCDALA
NVNIMAEKGTGVYDNTSEKSLDYRVDQDKSVTFRVENKHTYSVYLHSAE
>Mature_529_residues
MKNKIHDRFYSTIYGELQPQILFNNVTEGLVYKTIRSPCLSPRSLLPVTDTIFDSGPGRRAGDALKIFDSLGFCEAASLS
SVHYHGQQRQAGSLYICRLIPMVKCTYQISMDIKTDDARSFIELNSPGSKLVIKEVNNRVLLISYFESSSGDIRSETITL
GNSSEKLDFEIAFDGCSKTNTISTRDGKSIVTPFYNFERQRLPYVDFSNGYLKFTSFITGKGRYMDISIYNLNQIADRKL
VTSVGDSRLIPFGIDGPHVRNTTEQGIRYLNSKNNRGTIWFDIDLLEQCSESDIEYLRSLVFDNSWDTGVHYSKELNAFP
PEEAYKIMDEGYSYVYEKIGQKPTGWCSMRNKDNIKHAIYAYENLGMFWRNGDSGVHAEKNVGNLDDNTWEWWESASKAG
MAYPSFTHELDLDPAIKYSISRSKFLNWVDTYNSNGASIVSFYEYGQISRNTHEARFDILQHTDNSVIFIAHTNGCDALA
NVNIMAEKGTGVYDNTSEKSLDYRVDQDKSVTFRVENKHTYSVYLHSAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60208; Mature: 60208

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKIHDRFYSTIYGELQPQILFNNVTEGLVYKTIRSPCLSPRSLLPVTDTIFDSGPGRR
CCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCC
AGDALKIFDSLGFCEAASLSSVHYHGQQRQAGSLYICRLIPMVKCTYQISMDIKTDDARS
CCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEEHHHHHEEEEEEEEEEECCCCCC
FIELNSPGSKLVIKEVNNRVLLISYFESSSGDIRSETITLGNSSEKLDFEIAFDGCSKTN
EEEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCC
TISTRDGKSIVTPFYNFERQRLPYVDFSNGYLKFTSFITGKGRYMDISIYNLNQIADRKL
EEECCCCCEEECCCCCCCCCCCCEEECCCCEEEEEEEEECCCEEEEEEEEECHHHHHHHH
VTSVGDSRLIPFGIDGPHVRNTTEQGIRYLNSKNNRGTIWFDIDLLEQCSESDIEYLRSL
HHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEHHHHHHCCHHHHHHHHHH
VFDNSWDTGVHYSKELNAFPPEEAYKIMDEGYSYVYEKIGQKPTGWCSMRNKDNIKHAIY
HCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEE
AYENLGMFWRNGDSGVHAEKNVGNLDDNTWEWWESASKAGMAYPSFTHELDLDPAIKYSI
EEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEC
SRSKFLNWVDTYNSNGASIVSFYEYGQISRNTHEARFDILQHTDNSVIFIAHTNGCDALA
CHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCC
NVNIMAEKGTGVYDNTSEKSLDYRVDQDKSVTFRVENKHTYSVYLHSAE
CCEEEEECCCCCCCCCCCCCCCEEECCCCEEEEEEECCEEEEEEEEECC
>Mature Secondary Structure
MKNKIHDRFYSTIYGELQPQILFNNVTEGLVYKTIRSPCLSPRSLLPVTDTIFDSGPGRR
CCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCC
AGDALKIFDSLGFCEAASLSSVHYHGQQRQAGSLYICRLIPMVKCTYQISMDIKTDDARS
CCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCEEEEEHHHHHEEEEEEEEEEECCCCCC
FIELNSPGSKLVIKEVNNRVLLISYFESSSGDIRSETITLGNSSEKLDFEIAFDGCSKTN
EEEECCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCC
TISTRDGKSIVTPFYNFERQRLPYVDFSNGYLKFTSFITGKGRYMDISIYNLNQIADRKL
EEECCCCCEEECCCCCCCCCCCCEEECCCCEEEEEEEEECCCEEEEEEEEECHHHHHHHH
VTSVGDSRLIPFGIDGPHVRNTTEQGIRYLNSKNNRGTIWFDIDLLEQCSESDIEYLRSL
HHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEHHHHHHCCHHHHHHHHHH
VFDNSWDTGVHYSKELNAFPPEEAYKIMDEGYSYVYEKIGQKPTGWCSMRNKDNIKHAIY
HCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEE
AYENLGMFWRNGDSGVHAEKNVGNLDDNTWEWWESASKAGMAYPSFTHELDLDPAIKYSI
EEECCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHEEEC
SRSKFLNWVDTYNSNGASIVSFYEYGQISRNTHEARFDILQHTDNSVIFIAHTNGCDALA
CHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCC
NVNIMAEKGTGVYDNTSEKSLDYRVDQDKSVTFRVENKHTYSVYLHSAE
CCEEEEECCCCCCCCCCCCCCCEEECCCCEEEEEEECCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA