The gene/protein map for NC_003901 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226831

Identifier: 21226831

GI number: 21226831

Start: 877040

End: 879748

Strand: Reverse

Name: 21226831

Synonym: MM_0729

Alternate gene names: NA

Gene position: 879748-877040 (Counterclockwise)

Preceding gene: 21226832

Following gene: 21226820

Centisome position: 21.48

GC content: 49.21

Gene sequence:

>2709_bases
ATGATGTCGGCTAACCTTACATACTACACAGAACAGCTACCGCCTTATAATTACATGGATAACGGTACGCTGAAAGGCAT
TTCTATCGATCTCCTTGAGGCGATCACCGAGAAAATGGGGAAGAAGGTGACCAGGGAAGAGATACATCTCGTTTCCTGGA
CTGAGGGGTATCAGGCTGCTCTCACCCGGAATAATACGGTTCTCTTCGTTACAGCAAGAACTCCCGAAAGAGAGCAGTCC
TTCAAGTGGGTAGGGCCTATTTATTCTGATAAGTACGTTCTGTTCGCCAAGAGAGACCCTGGAGTCACAATAGACGGCCC
TGAAGATCTGAAGGAATACCGGATTGGAGTTATCAGCGACGATGTAGCGGCTCAGCAGCTGCTTAATATTGGGGTAAACC
AGAGCCAGATCGTGCCCAAAAGCAACGCATCCGCAAACATCGCCGCACTCGAGAATGACGAGATAGATCTCTGGGCATGT
CCTGAGGAAGCAGGGAGGCACTTCACTGAACAGGTAACCGGGAACTATTATGCCTACACAGTTGTGTATCAGTTAGAAGC
TCAGGATCTTTATTATGCCTTCAATAAAAATACCTCTGATTCAGTCATTAAATCCTTCCAGCAGGCACTGGATGCTCTTA
AACAGGAGAAAGACTCTGCAGGCATCAGCAAATATGATCGGATCCTCGGGCAGCATATCCCATCGGTAGGCCTTGCCCGG
CTCAATTACCTGACCGAAGAGTGGGCTCCATTCAATTACCAGGAGGATGGAAATGTCACCGGCATCTCTGTAGAGATACT
TGAGTCCGTTTTCAAGAATATTGGCGTAAACCGTTCAGGGGCAGATATCCGCATTGTCCCTCTGGCAGAAGGTTTCAAGA
TCGCACAGAACAATTCCAGCACGGTTCTTTTCTCTATTGTCCGCACAGCGGAACGCGAGCCCCTTTACAAGTGGGCAGGA
CCTTTTACCAGAGCCAGCTTTGTCCTCTATGCACCGATAAGCAGTAATATTACAATATCCTCTGCAGAGGACCTCAACCA
GTACAGGATCGGTACAGTGGAGGCTTCCATCGAAAACGACCTCCTCGCCAGCCAGGGTGTGAGCGAATCACAGATTGTCA
ATGGCGAAACACCCGAAGACCTCCTTCAAATGCTGGCTGATGGTGAGATCGATCTCTGGGCAACCGGTGACCTTGCCGGG
AGACACCAGATGTTACAGAGTTCAGAGGATCCCAACAACTATGAGATCGTGTATACTCTGAGCGAGAACGATTTCTATTA
TATCTTCAGCAAAGACGTCCCGGATGCGCTGGTCCTTGCCTTTGATAATGCGCTCGAGACAGTGCGGAAGCAGAAAGATG
AGCAGGGAGTCAGCGATTATGAGAGGATAATTTACCGGAATCTGGGGGTTGGATGTGCCAGGCAGGCATTCACCGACGAC
CTGGTGGTGGAGCTTGTAAATACAACTGCAGCAGCAATAGAGAATAACGCTGCAGATACTTTCCGACGCATCAACGCGGG
TGAAGCACCATATCGAAACCAGGAAGATCCGAGCCTCTATGTCTTCGTCTATGATATGAATTTGACTATGGTTGCTCATG
CAGACAATATTCAGGTTGTCGGCGAGAACTTCAGGGGCAAAACAGATGTAACTGGCAAGCCTTTCCGTGATGACATTTTA
GAAGGAGCACTGAATAACGGGACCGGCTGGGTAGATTACGTCTATATGCATCCTGTCCAGGCGAACCTGTACTATAAGAC
AACTTACTACAGGTTAACCCGGGGAAGCGATGGAAACTCCTACATTGTGTGCAGCGGCAATTATAAGGACTGCCATAACG
AGTCCGAGGCAACACCGGCTAATAATTCCACTGCATCTCCCGAGGAACTTGTAGCATTCGTCGAGAAAGCCTTCGAATAT
GCTCATGTGAACGGACAGGAAGCAGCTTTCCGTGAGTTCAACAATCAGACAGGCCAGTTCGTTGATGGCGAACTCTATAT
TTTCGCATATGATACAAACGGCACCACTCTTGCTCTTCCCTTCCAGCCCGAAATTATCGGGACCAACCGGTGGAATCTCA
CGGACGCGAATGGAACACTTTTTATCCAGGATCTGATATCTACAGCAAAGTCAGGAGGGGGTTTTGTTCAATATCTCTAT
GCAGACCCTGCAGACAACTTCACTGTCAAACAAAAACTCAGCTACGTGATGATGGTAAACCAGAGCTGGATACTTGGGGC
TGGAATTTATAATCCGCCTGAGAATTCATCGATCGTGAATGCGGGGATAGATCCCCAGGTTAGAGAGAGCCTGAAATCTT
TTGTAGGGGAGGCGATTGACTATGCTAATACGAGTGGAAAAGATGCAGCGATCGCGAAATTCAATGACCAGAATGGGACT
TTCGTCCGCGGCAACCTCTATGTCTATGCCTTTGATTACAACGGGACGACCCTGGCGCTTCCCTACCAGCCCCAGCTGAT
CGGAACCGACCTTTCCGGACTTCAGGACCCCTACGGGGTGAATTATACAAAGGTTGAGATCTTCCTCGCACAGCAGGGAG
GGGGTTTCCTCTTCTACCACTACTACAATCCGGCCCGCAATATGACCCCTGAACCAAAGATGAGCTACGTCCAGAAGGTT
GACGACACCTGGTGGCTCGGGGCCGGGACCTATATCGAGGACCTGAACGAGACCACTCAACCATATTAA

Upstream 100 bases:

>100_bases
CACGTGCTTTATTCTTATTGCGGTATTTTTTGGAGCGTTGTCTCCAGCCGCCGGATCCCTTTCTGAATCTGAAGCTGCAT
CTACAGATATGAACGACACT

Downstream 100 bases:

>100_bases
CCGACAGAAAATTATCCCGGACAATCAAACGGTCCGGGGGATTTATTTTTTCATTTAACAATGAACTCACCACTAACTAT
AAATTAGTCCTCTTGAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Cache Sensor Protein; Sensor Histidine Kinase; Cache Type 2 Domain-Containing Protein; Methyl-Accepting Chemotaxis Protein; Periplasmic Sensor Signal Transduction Histidine Kinase; Histidine Kinase; Signal Transduction Histidine Kinase-Like; Periplasmic Protein; ABC-Type Amino Acid Transport/Signal Transduction Systems; ABC-Type Amino Acid Transporter; Methyl-Accepting Chemotaxis Sensory Transducer; Amino Acid ABC Transporter; ABC Amino Acid Transporter Periplasmic Protein; Multi-Sensor Hybrid Histidine Kinase; Cache Domain-Contain Protein; Cache Domain Family; Transmembrane Sensor Histidine Kinase Protein; Signal Transduction Histidine Kinase

Number of amino acids: Translated: 902; Mature: 902

Protein sequence:

>902_residues
MMSANLTYYTEQLPPYNYMDNGTLKGISIDLLEAITEKMGKKVTREEIHLVSWTEGYQAALTRNNTVLFVTARTPEREQS
FKWVGPIYSDKYVLFAKRDPGVTIDGPEDLKEYRIGVISDDVAAQQLLNIGVNQSQIVPKSNASANIAALENDEIDLWAC
PEEAGRHFTEQVTGNYYAYTVVYQLEAQDLYYAFNKNTSDSVIKSFQQALDALKQEKDSAGISKYDRILGQHIPSVGLAR
LNYLTEEWAPFNYQEDGNVTGISVEILESVFKNIGVNRSGADIRIVPLAEGFKIAQNNSSTVLFSIVRTAEREPLYKWAG
PFTRASFVLYAPISSNITISSAEDLNQYRIGTVEASIENDLLASQGVSESQIVNGETPEDLLQMLADGEIDLWATGDLAG
RHQMLQSSEDPNNYEIVYTLSENDFYYIFSKDVPDALVLAFDNALETVRKQKDEQGVSDYERIIYRNLGVGCARQAFTDD
LVVELVNTTAAAIENNAADTFRRINAGEAPYRNQEDPSLYVFVYDMNLTMVAHADNIQVVGENFRGKTDVTGKPFRDDIL
EGALNNGTGWVDYVYMHPVQANLYYKTTYYRLTRGSDGNSYIVCSGNYKDCHNESEATPANNSTASPEELVAFVEKAFEY
AHVNGQEAAFREFNNQTGQFVDGELYIFAYDTNGTTLALPFQPEIIGTNRWNLTDANGTLFIQDLISTAKSGGGFVQYLY
ADPADNFTVKQKLSYVMMVNQSWILGAGIYNPPENSSIVNAGIDPQVRESLKSFVGEAIDYANTSGKDAAIAKFNDQNGT
FVRGNLYVYAFDYNGTTLALPYQPQLIGTDLSGLQDPYGVNYTKVEIFLAQQGGGFLFYHYYNPARNMTPEPKMSYVQKV
DDTWWLGAGTYIEDLNETTQPY

Sequences:

>Translated_902_residues
MMSANLTYYTEQLPPYNYMDNGTLKGISIDLLEAITEKMGKKVTREEIHLVSWTEGYQAALTRNNTVLFVTARTPEREQS
FKWVGPIYSDKYVLFAKRDPGVTIDGPEDLKEYRIGVISDDVAAQQLLNIGVNQSQIVPKSNASANIAALENDEIDLWAC
PEEAGRHFTEQVTGNYYAYTVVYQLEAQDLYYAFNKNTSDSVIKSFQQALDALKQEKDSAGISKYDRILGQHIPSVGLAR
LNYLTEEWAPFNYQEDGNVTGISVEILESVFKNIGVNRSGADIRIVPLAEGFKIAQNNSSTVLFSIVRTAEREPLYKWAG
PFTRASFVLYAPISSNITISSAEDLNQYRIGTVEASIENDLLASQGVSESQIVNGETPEDLLQMLADGEIDLWATGDLAG
RHQMLQSSEDPNNYEIVYTLSENDFYYIFSKDVPDALVLAFDNALETVRKQKDEQGVSDYERIIYRNLGVGCARQAFTDD
LVVELVNTTAAAIENNAADTFRRINAGEAPYRNQEDPSLYVFVYDMNLTMVAHADNIQVVGENFRGKTDVTGKPFRDDIL
EGALNNGTGWVDYVYMHPVQANLYYKTTYYRLTRGSDGNSYIVCSGNYKDCHNESEATPANNSTASPEELVAFVEKAFEY
AHVNGQEAAFREFNNQTGQFVDGELYIFAYDTNGTTLALPFQPEIIGTNRWNLTDANGTLFIQDLISTAKSGGGFVQYLY
ADPADNFTVKQKLSYVMMVNQSWILGAGIYNPPENSSIVNAGIDPQVRESLKSFVGEAIDYANTSGKDAAIAKFNDQNGT
FVRGNLYVYAFDYNGTTLALPYQPQLIGTDLSGLQDPYGVNYTKVEIFLAQQGGGFLFYHYYNPARNMTPEPKMSYVQKV
DDTWWLGAGTYIEDLNETTQPY
>Mature_902_residues
MMSANLTYYTEQLPPYNYMDNGTLKGISIDLLEAITEKMGKKVTREEIHLVSWTEGYQAALTRNNTVLFVTARTPEREQS
FKWVGPIYSDKYVLFAKRDPGVTIDGPEDLKEYRIGVISDDVAAQQLLNIGVNQSQIVPKSNASANIAALENDEIDLWAC
PEEAGRHFTEQVTGNYYAYTVVYQLEAQDLYYAFNKNTSDSVIKSFQQALDALKQEKDSAGISKYDRILGQHIPSVGLAR
LNYLTEEWAPFNYQEDGNVTGISVEILESVFKNIGVNRSGADIRIVPLAEGFKIAQNNSSTVLFSIVRTAEREPLYKWAG
PFTRASFVLYAPISSNITISSAEDLNQYRIGTVEASIENDLLASQGVSESQIVNGETPEDLLQMLADGEIDLWATGDLAG
RHQMLQSSEDPNNYEIVYTLSENDFYYIFSKDVPDALVLAFDNALETVRKQKDEQGVSDYERIIYRNLGVGCARQAFTDD
LVVELVNTTAAAIENNAADTFRRINAGEAPYRNQEDPSLYVFVYDMNLTMVAHADNIQVVGENFRGKTDVTGKPFRDDIL
EGALNNGTGWVDYVYMHPVQANLYYKTTYYRLTRGSDGNSYIVCSGNYKDCHNESEATPANNSTASPEELVAFVEKAFEY
AHVNGQEAAFREFNNQTGQFVDGELYIFAYDTNGTTLALPFQPEIIGTNRWNLTDANGTLFIQDLISTAKSGGGFVQYLY
ADPADNFTVKQKLSYVMMVNQSWILGAGIYNPPENSSIVNAGIDPQVRESLKSFVGEAIDYANTSGKDAAIAKFNDQNGT
FVRGNLYVYAFDYNGTTLALPYQPQLIGTDLSGLQDPYGVNYTKVEIFLAQQGGGFLFYHYYNPARNMTPEPKMSYVQKV
DDTWWLGAGTYIEDLNETTQPY

Specific function: Unknown

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 100735; Mature: 100735

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSANLTYYTEQLPPYNYMDNGTLKGISIDLLEAITEKMGKKVTREEIHLVSWTEGYQAA
CCCCCEEEEECCCCCCCCCCCCEECCEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE
LTRNNTVLFVTARTPEREQSFKWVGPIYSDKYVLFAKRDPGVTIDGPEDLKEYRIGVISD
EECCCEEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCEEECCHHHHHHHCCEEEEC
DVAAQQLLNIGVNQSQIVPKSNASANIAALENDEIDLWACPEEAGRHFTEQVTGNYYAYT
HHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCEEEEECCHHHCCHHHHHHCCCEEEEE
VVYQLEAQDLYYAFNKNTSDSVIKSFQQALDALKQEKDSAGISKYDRILGQHIPSVGLAR
EEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
LNYLTEEWAPFNYQEDGNVTGISVEILESVFKNIGVNRSGADIRIVPLAEGFKIAQNNSS
HHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCC
TVLFSIVRTAEREPLYKWAGPFTRASFVLYAPISSNITISSAEDLNQYRIGTVEASIEND
EEEEEEHHHHCCCCCHHHCCCCCCCEEEEEECCCCCEEEECHHCCCCEEEEEEEECHHHH
LLASQGVSESQIVNGETPEDLLQMLADGEIDLWATGDLAGRHQMLQSSEDPNNYEIVYTL
HHHHCCCCHHEEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEE
SENDFYYIFSKDVPDALVLAFDNALETVRKQKDEQGVSDYERIIYRNLGVGCARQAFTDD
ECCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH
LVVELVNTTAAAIENNAADTFRRINAGEAPYRNQEDPSLYVFVYDMNLTMVAHADNIQVV
HHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEE
GENFRGKTDVTGKPFRDDILEGALNNGTGWVDYVYMHPVQANLYYKTTYYRLTRGSDGNS
ECCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEEECEEEEEEEEEEEEECCCCCE
YIVCSGNYKDCHNESEATPANNSTASPEELVAFVEKAFEYAHVNGQEAAFREFNNQTGQF
EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCE
VDGELYIFAYDTNGTTLALPFQPEIIGTNRWNLTDANGTLFIQDLISTAKSGGGFVQYLY
ECCEEEEEEECCCCCEEEEECCCCEEECCCCEEECCCCCEEHHHHHHHHCCCCCEEEEEE
ADPADNFTVKQKLSYVMMVNQSWILGAGIYNPPENSSIVNAGIDPQVRESLKSFVGEAID
ECCCCCEEHHHHCEEEEEECCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH
YANTSGKDAAIAKFNDQNGTFVRGNLYVYAFDYNGTTLALPYQPQLIGTDLSGLQDPYGV
CCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCEEEEECCCCCEECCCHHCCCCCCCC
NYTKVEIFLAQQGGGFLFYHYYNPARNMTPEPKMSYVQKVDDTWWLGAGTYIEDLNETTQ
CEEEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHCCHHCC
PY
CC
>Mature Secondary Structure
MMSANLTYYTEQLPPYNYMDNGTLKGISIDLLEAITEKMGKKVTREEIHLVSWTEGYQAA
CCCCCEEEEECCCCCCCCCCCCEECCEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE
LTRNNTVLFVTARTPEREQSFKWVGPIYSDKYVLFAKRDPGVTIDGPEDLKEYRIGVISD
EECCCEEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCEEECCHHHHHHHCCEEEEC
DVAAQQLLNIGVNQSQIVPKSNASANIAALENDEIDLWACPEEAGRHFTEQVTGNYYAYT
HHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCEEEEECCHHHCCHHHHHHCCCEEEEE
VVYQLEAQDLYYAFNKNTSDSVIKSFQQALDALKQEKDSAGISKYDRILGQHIPSVGLAR
EEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH
LNYLTEEWAPFNYQEDGNVTGISVEILESVFKNIGVNRSGADIRIVPLAEGFKIAQNNSS
HHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCC
TVLFSIVRTAEREPLYKWAGPFTRASFVLYAPISSNITISSAEDLNQYRIGTVEASIEND
EEEEEEHHHHCCCCCHHHCCCCCCCEEEEEECCCCCEEEECHHCCCCEEEEEEEECHHHH
LLASQGVSESQIVNGETPEDLLQMLADGEIDLWATGDLAGRHQMLQSSEDPNNYEIVYTL
HHHHCCCCHHEEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEE
SENDFYYIFSKDVPDALVLAFDNALETVRKQKDEQGVSDYERIIYRNLGVGCARQAFTDD
ECCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH
LVVELVNTTAAAIENNAADTFRRINAGEAPYRNQEDPSLYVFVYDMNLTMVAHADNIQVV
HHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEE
GENFRGKTDVTGKPFRDDILEGALNNGTGWVDYVYMHPVQANLYYKTTYYRLTRGSDGNS
ECCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEEECEEEEEEEEEEEEECCCCCE
YIVCSGNYKDCHNESEATPANNSTASPEELVAFVEKAFEYAHVNGQEAAFREFNNQTGQF
EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCE
VDGELYIFAYDTNGTTLALPFQPEIIGTNRWNLTDANGTLFIQDLISTAKSGGGFVQYLY
ECCEEEEEEECCCCCEEEEECCCCEEECCCCEEECCCCCEEHHHHHHHHCCCCCEEEEEE
ADPADNFTVKQKLSYVMMVNQSWILGAGIYNPPENSSIVNAGIDPQVRESLKSFVGEAID
ECCCCCEEHHHHCEEEEEECCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH
YANTSGKDAAIAKFNDQNGTFVRGNLYVYAFDYNGTTLALPYQPQLIGTDLSGLQDPYGV
CCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCEEEEECCCCCEECCCHHCCCCCCCC
NYTKVEIFLAQQGGGFLFYHYYNPARNMTPEPKMSYVQKVDDTWWLGAGTYIEDLNETTQ
CEEEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHCCHHCC
PY
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA