Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226831
Identifier: 21226831
GI number: 21226831
Start: 877040
End: 879748
Strand: Reverse
Name: 21226831
Synonym: MM_0729
Alternate gene names: NA
Gene position: 879748-877040 (Counterclockwise)
Preceding gene: 21226832
Following gene: 21226820
Centisome position: 21.48
GC content: 49.21
Gene sequence:
>2709_bases ATGATGTCGGCTAACCTTACATACTACACAGAACAGCTACCGCCTTATAATTACATGGATAACGGTACGCTGAAAGGCAT TTCTATCGATCTCCTTGAGGCGATCACCGAGAAAATGGGGAAGAAGGTGACCAGGGAAGAGATACATCTCGTTTCCTGGA CTGAGGGGTATCAGGCTGCTCTCACCCGGAATAATACGGTTCTCTTCGTTACAGCAAGAACTCCCGAAAGAGAGCAGTCC TTCAAGTGGGTAGGGCCTATTTATTCTGATAAGTACGTTCTGTTCGCCAAGAGAGACCCTGGAGTCACAATAGACGGCCC TGAAGATCTGAAGGAATACCGGATTGGAGTTATCAGCGACGATGTAGCGGCTCAGCAGCTGCTTAATATTGGGGTAAACC AGAGCCAGATCGTGCCCAAAAGCAACGCATCCGCAAACATCGCCGCACTCGAGAATGACGAGATAGATCTCTGGGCATGT CCTGAGGAAGCAGGGAGGCACTTCACTGAACAGGTAACCGGGAACTATTATGCCTACACAGTTGTGTATCAGTTAGAAGC TCAGGATCTTTATTATGCCTTCAATAAAAATACCTCTGATTCAGTCATTAAATCCTTCCAGCAGGCACTGGATGCTCTTA AACAGGAGAAAGACTCTGCAGGCATCAGCAAATATGATCGGATCCTCGGGCAGCATATCCCATCGGTAGGCCTTGCCCGG CTCAATTACCTGACCGAAGAGTGGGCTCCATTCAATTACCAGGAGGATGGAAATGTCACCGGCATCTCTGTAGAGATACT TGAGTCCGTTTTCAAGAATATTGGCGTAAACCGTTCAGGGGCAGATATCCGCATTGTCCCTCTGGCAGAAGGTTTCAAGA TCGCACAGAACAATTCCAGCACGGTTCTTTTCTCTATTGTCCGCACAGCGGAACGCGAGCCCCTTTACAAGTGGGCAGGA CCTTTTACCAGAGCCAGCTTTGTCCTCTATGCACCGATAAGCAGTAATATTACAATATCCTCTGCAGAGGACCTCAACCA GTACAGGATCGGTACAGTGGAGGCTTCCATCGAAAACGACCTCCTCGCCAGCCAGGGTGTGAGCGAATCACAGATTGTCA ATGGCGAAACACCCGAAGACCTCCTTCAAATGCTGGCTGATGGTGAGATCGATCTCTGGGCAACCGGTGACCTTGCCGGG AGACACCAGATGTTACAGAGTTCAGAGGATCCCAACAACTATGAGATCGTGTATACTCTGAGCGAGAACGATTTCTATTA TATCTTCAGCAAAGACGTCCCGGATGCGCTGGTCCTTGCCTTTGATAATGCGCTCGAGACAGTGCGGAAGCAGAAAGATG AGCAGGGAGTCAGCGATTATGAGAGGATAATTTACCGGAATCTGGGGGTTGGATGTGCCAGGCAGGCATTCACCGACGAC CTGGTGGTGGAGCTTGTAAATACAACTGCAGCAGCAATAGAGAATAACGCTGCAGATACTTTCCGACGCATCAACGCGGG TGAAGCACCATATCGAAACCAGGAAGATCCGAGCCTCTATGTCTTCGTCTATGATATGAATTTGACTATGGTTGCTCATG CAGACAATATTCAGGTTGTCGGCGAGAACTTCAGGGGCAAAACAGATGTAACTGGCAAGCCTTTCCGTGATGACATTTTA GAAGGAGCACTGAATAACGGGACCGGCTGGGTAGATTACGTCTATATGCATCCTGTCCAGGCGAACCTGTACTATAAGAC AACTTACTACAGGTTAACCCGGGGAAGCGATGGAAACTCCTACATTGTGTGCAGCGGCAATTATAAGGACTGCCATAACG AGTCCGAGGCAACACCGGCTAATAATTCCACTGCATCTCCCGAGGAACTTGTAGCATTCGTCGAGAAAGCCTTCGAATAT GCTCATGTGAACGGACAGGAAGCAGCTTTCCGTGAGTTCAACAATCAGACAGGCCAGTTCGTTGATGGCGAACTCTATAT TTTCGCATATGATACAAACGGCACCACTCTTGCTCTTCCCTTCCAGCCCGAAATTATCGGGACCAACCGGTGGAATCTCA CGGACGCGAATGGAACACTTTTTATCCAGGATCTGATATCTACAGCAAAGTCAGGAGGGGGTTTTGTTCAATATCTCTAT GCAGACCCTGCAGACAACTTCACTGTCAAACAAAAACTCAGCTACGTGATGATGGTAAACCAGAGCTGGATACTTGGGGC TGGAATTTATAATCCGCCTGAGAATTCATCGATCGTGAATGCGGGGATAGATCCCCAGGTTAGAGAGAGCCTGAAATCTT TTGTAGGGGAGGCGATTGACTATGCTAATACGAGTGGAAAAGATGCAGCGATCGCGAAATTCAATGACCAGAATGGGACT TTCGTCCGCGGCAACCTCTATGTCTATGCCTTTGATTACAACGGGACGACCCTGGCGCTTCCCTACCAGCCCCAGCTGAT CGGAACCGACCTTTCCGGACTTCAGGACCCCTACGGGGTGAATTATACAAAGGTTGAGATCTTCCTCGCACAGCAGGGAG GGGGTTTCCTCTTCTACCACTACTACAATCCGGCCCGCAATATGACCCCTGAACCAAAGATGAGCTACGTCCAGAAGGTT GACGACACCTGGTGGCTCGGGGCCGGGACCTATATCGAGGACCTGAACGAGACCACTCAACCATATTAA
Upstream 100 bases:
>100_bases CACGTGCTTTATTCTTATTGCGGTATTTTTTGGAGCGTTGTCTCCAGCCGCCGGATCCCTTTCTGAATCTGAAGCTGCAT CTACAGATATGAACGACACT
Downstream 100 bases:
>100_bases CCGACAGAAAATTATCCCGGACAATCAAACGGTCCGGGGGATTTATTTTTTCATTTAACAATGAACTCACCACTAACTAT AAATTAGTCCTCTTGAGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Cache Sensor Protein; Sensor Histidine Kinase; Cache Type 2 Domain-Containing Protein; Methyl-Accepting Chemotaxis Protein; Periplasmic Sensor Signal Transduction Histidine Kinase; Histidine Kinase; Signal Transduction Histidine Kinase-Like; Periplasmic Protein; ABC-Type Amino Acid Transport/Signal Transduction Systems; ABC-Type Amino Acid Transporter; Methyl-Accepting Chemotaxis Sensory Transducer; Amino Acid ABC Transporter; ABC Amino Acid Transporter Periplasmic Protein; Multi-Sensor Hybrid Histidine Kinase; Cache Domain-Contain Protein; Cache Domain Family; Transmembrane Sensor Histidine Kinase Protein; Signal Transduction Histidine Kinase
Number of amino acids: Translated: 902; Mature: 902
Protein sequence:
>902_residues MMSANLTYYTEQLPPYNYMDNGTLKGISIDLLEAITEKMGKKVTREEIHLVSWTEGYQAALTRNNTVLFVTARTPEREQS FKWVGPIYSDKYVLFAKRDPGVTIDGPEDLKEYRIGVISDDVAAQQLLNIGVNQSQIVPKSNASANIAALENDEIDLWAC PEEAGRHFTEQVTGNYYAYTVVYQLEAQDLYYAFNKNTSDSVIKSFQQALDALKQEKDSAGISKYDRILGQHIPSVGLAR LNYLTEEWAPFNYQEDGNVTGISVEILESVFKNIGVNRSGADIRIVPLAEGFKIAQNNSSTVLFSIVRTAEREPLYKWAG PFTRASFVLYAPISSNITISSAEDLNQYRIGTVEASIENDLLASQGVSESQIVNGETPEDLLQMLADGEIDLWATGDLAG RHQMLQSSEDPNNYEIVYTLSENDFYYIFSKDVPDALVLAFDNALETVRKQKDEQGVSDYERIIYRNLGVGCARQAFTDD LVVELVNTTAAAIENNAADTFRRINAGEAPYRNQEDPSLYVFVYDMNLTMVAHADNIQVVGENFRGKTDVTGKPFRDDIL EGALNNGTGWVDYVYMHPVQANLYYKTTYYRLTRGSDGNSYIVCSGNYKDCHNESEATPANNSTASPEELVAFVEKAFEY AHVNGQEAAFREFNNQTGQFVDGELYIFAYDTNGTTLALPFQPEIIGTNRWNLTDANGTLFIQDLISTAKSGGGFVQYLY ADPADNFTVKQKLSYVMMVNQSWILGAGIYNPPENSSIVNAGIDPQVRESLKSFVGEAIDYANTSGKDAAIAKFNDQNGT FVRGNLYVYAFDYNGTTLALPYQPQLIGTDLSGLQDPYGVNYTKVEIFLAQQGGGFLFYHYYNPARNMTPEPKMSYVQKV DDTWWLGAGTYIEDLNETTQPY
Sequences:
>Translated_902_residues MMSANLTYYTEQLPPYNYMDNGTLKGISIDLLEAITEKMGKKVTREEIHLVSWTEGYQAALTRNNTVLFVTARTPEREQS FKWVGPIYSDKYVLFAKRDPGVTIDGPEDLKEYRIGVISDDVAAQQLLNIGVNQSQIVPKSNASANIAALENDEIDLWAC PEEAGRHFTEQVTGNYYAYTVVYQLEAQDLYYAFNKNTSDSVIKSFQQALDALKQEKDSAGISKYDRILGQHIPSVGLAR LNYLTEEWAPFNYQEDGNVTGISVEILESVFKNIGVNRSGADIRIVPLAEGFKIAQNNSSTVLFSIVRTAEREPLYKWAG PFTRASFVLYAPISSNITISSAEDLNQYRIGTVEASIENDLLASQGVSESQIVNGETPEDLLQMLADGEIDLWATGDLAG RHQMLQSSEDPNNYEIVYTLSENDFYYIFSKDVPDALVLAFDNALETVRKQKDEQGVSDYERIIYRNLGVGCARQAFTDD LVVELVNTTAAAIENNAADTFRRINAGEAPYRNQEDPSLYVFVYDMNLTMVAHADNIQVVGENFRGKTDVTGKPFRDDIL EGALNNGTGWVDYVYMHPVQANLYYKTTYYRLTRGSDGNSYIVCSGNYKDCHNESEATPANNSTASPEELVAFVEKAFEY AHVNGQEAAFREFNNQTGQFVDGELYIFAYDTNGTTLALPFQPEIIGTNRWNLTDANGTLFIQDLISTAKSGGGFVQYLY ADPADNFTVKQKLSYVMMVNQSWILGAGIYNPPENSSIVNAGIDPQVRESLKSFVGEAIDYANTSGKDAAIAKFNDQNGT FVRGNLYVYAFDYNGTTLALPYQPQLIGTDLSGLQDPYGVNYTKVEIFLAQQGGGFLFYHYYNPARNMTPEPKMSYVQKV DDTWWLGAGTYIEDLNETTQPY >Mature_902_residues MMSANLTYYTEQLPPYNYMDNGTLKGISIDLLEAITEKMGKKVTREEIHLVSWTEGYQAALTRNNTVLFVTARTPEREQS FKWVGPIYSDKYVLFAKRDPGVTIDGPEDLKEYRIGVISDDVAAQQLLNIGVNQSQIVPKSNASANIAALENDEIDLWAC PEEAGRHFTEQVTGNYYAYTVVYQLEAQDLYYAFNKNTSDSVIKSFQQALDALKQEKDSAGISKYDRILGQHIPSVGLAR LNYLTEEWAPFNYQEDGNVTGISVEILESVFKNIGVNRSGADIRIVPLAEGFKIAQNNSSTVLFSIVRTAEREPLYKWAG PFTRASFVLYAPISSNITISSAEDLNQYRIGTVEASIENDLLASQGVSESQIVNGETPEDLLQMLADGEIDLWATGDLAG RHQMLQSSEDPNNYEIVYTLSENDFYYIFSKDVPDALVLAFDNALETVRKQKDEQGVSDYERIIYRNLGVGCARQAFTDD LVVELVNTTAAAIENNAADTFRRINAGEAPYRNQEDPSLYVFVYDMNLTMVAHADNIQVVGENFRGKTDVTGKPFRDDIL EGALNNGTGWVDYVYMHPVQANLYYKTTYYRLTRGSDGNSYIVCSGNYKDCHNESEATPANNSTASPEELVAFVEKAFEY AHVNGQEAAFREFNNQTGQFVDGELYIFAYDTNGTTLALPFQPEIIGTNRWNLTDANGTLFIQDLISTAKSGGGFVQYLY ADPADNFTVKQKLSYVMMVNQSWILGAGIYNPPENSSIVNAGIDPQVRESLKSFVGEAIDYANTSGKDAAIAKFNDQNGT FVRGNLYVYAFDYNGTTLALPYQPQLIGTDLSGLQDPYGVNYTKVEIFLAQQGGGFLFYHYYNPARNMTPEPKMSYVQKV DDTWWLGAGTYIEDLNETTQPY
Specific function: Unknown
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 100735; Mature: 100735
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSANLTYYTEQLPPYNYMDNGTLKGISIDLLEAITEKMGKKVTREEIHLVSWTEGYQAA CCCCCEEEEECCCCCCCCCCCCEECCEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE LTRNNTVLFVTARTPEREQSFKWVGPIYSDKYVLFAKRDPGVTIDGPEDLKEYRIGVISD EECCCEEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCEEECCHHHHHHHCCEEEEC DVAAQQLLNIGVNQSQIVPKSNASANIAALENDEIDLWACPEEAGRHFTEQVTGNYYAYT HHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCEEEEECCHHHCCHHHHHHCCCEEEEE VVYQLEAQDLYYAFNKNTSDSVIKSFQQALDALKQEKDSAGISKYDRILGQHIPSVGLAR EEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH LNYLTEEWAPFNYQEDGNVTGISVEILESVFKNIGVNRSGADIRIVPLAEGFKIAQNNSS HHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCC TVLFSIVRTAEREPLYKWAGPFTRASFVLYAPISSNITISSAEDLNQYRIGTVEASIEND EEEEEEHHHHCCCCCHHHCCCCCCCEEEEEECCCCCEEEECHHCCCCEEEEEEEECHHHH LLASQGVSESQIVNGETPEDLLQMLADGEIDLWATGDLAGRHQMLQSSEDPNNYEIVYTL HHHHCCCCHHEEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEE SENDFYYIFSKDVPDALVLAFDNALETVRKQKDEQGVSDYERIIYRNLGVGCARQAFTDD ECCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH LVVELVNTTAAAIENNAADTFRRINAGEAPYRNQEDPSLYVFVYDMNLTMVAHADNIQVV HHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEE GENFRGKTDVTGKPFRDDILEGALNNGTGWVDYVYMHPVQANLYYKTTYYRLTRGSDGNS ECCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEEECEEEEEEEEEEEEECCCCCE YIVCSGNYKDCHNESEATPANNSTASPEELVAFVEKAFEYAHVNGQEAAFREFNNQTGQF EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCE VDGELYIFAYDTNGTTLALPFQPEIIGTNRWNLTDANGTLFIQDLISTAKSGGGFVQYLY ECCEEEEEEECCCCCEEEEECCCCEEECCCCEEECCCCCEEHHHHHHHHCCCCCEEEEEE ADPADNFTVKQKLSYVMMVNQSWILGAGIYNPPENSSIVNAGIDPQVRESLKSFVGEAID ECCCCCEEHHHHCEEEEEECCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH YANTSGKDAAIAKFNDQNGTFVRGNLYVYAFDYNGTTLALPYQPQLIGTDLSGLQDPYGV CCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCEEEEECCCCCEECCCHHCCCCCCCC NYTKVEIFLAQQGGGFLFYHYYNPARNMTPEPKMSYVQKVDDTWWLGAGTYIEDLNETTQ CEEEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHCCHHCC PY CC >Mature Secondary Structure MMSANLTYYTEQLPPYNYMDNGTLKGISIDLLEAITEKMGKKVTREEIHLVSWTEGYQAA CCCCCEEEEECCCCCCCCCCCCEECCEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEE LTRNNTVLFVTARTPEREQSFKWVGPIYSDKYVLFAKRDPGVTIDGPEDLKEYRIGVISD EECCCEEEEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCEEECCHHHHHHHCCEEEEC DVAAQQLLNIGVNQSQIVPKSNASANIAALENDEIDLWACPEEAGRHFTEQVTGNYYAYT HHHHHHHHHCCCCCCEECCCCCCCCEEEEECCCCEEEEECCHHHCCHHHHHHCCCEEEEE VVYQLEAQDLYYAFNKNTSDSVIKSFQQALDALKQEKDSAGISKYDRILGQHIPSVGLAR EEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH LNYLTEEWAPFNYQEDGNVTGISVEILESVFKNIGVNRSGADIRIVPLAEGFKIAQNNSS HHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCC TVLFSIVRTAEREPLYKWAGPFTRASFVLYAPISSNITISSAEDLNQYRIGTVEASIEND EEEEEEHHHHCCCCCHHHCCCCCCCEEEEEECCCCCEEEECHHCCCCEEEEEEEECHHHH LLASQGVSESQIVNGETPEDLLQMLADGEIDLWATGDLAGRHQMLQSSEDPNNYEIVYTL HHHHCCCCHHEEECCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCEEEEEEE SENDFYYIFSKDVPDALVLAFDNALETVRKQKDEQGVSDYERIIYRNLGVGCARQAFTDD ECCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHH LVVELVNTTAAAIENNAADTFRRINAGEAPYRNQEDPSLYVFVYDMNLTMVAHADNIQVV HHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCEEEE GENFRGKTDVTGKPFRDDILEGALNNGTGWVDYVYMHPVQANLYYKTTYYRLTRGSDGNS ECCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEEEEECEEEEEEEEEEEEECCCCCE YIVCSGNYKDCHNESEATPANNSTASPEELVAFVEKAFEYAHVNGQEAAFREFNNQTGQF EEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCE VDGELYIFAYDTNGTTLALPFQPEIIGTNRWNLTDANGTLFIQDLISTAKSGGGFVQYLY ECCEEEEEEECCCCCEEEEECCCCEEECCCCEEECCCCCEEHHHHHHHHCCCCCEEEEEE ADPADNFTVKQKLSYVMMVNQSWILGAGIYNPPENSSIVNAGIDPQVRESLKSFVGEAID ECCCCCEEHHHHCEEEEEECCCEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH YANTSGKDAAIAKFNDQNGTFVRGNLYVYAFDYNGTTLALPYQPQLIGTDLSGLQDPYGV CCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCEEEEECCCCCEECCCHHCCCCCCCC NYTKVEIFLAQQGGGFLFYHYYNPARNMTPEPKMSYVQKVDDTWWLGAGTYIEDLNETTQ CEEEEEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEECCCHHHHHCCHHCC PY CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA