| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226801
Identifier: 21226801
GI number: 21226801
Start: 839754
End: 840212
Strand: Direct
Name: 21226801
Synonym: MM_0699
Alternate gene names: NA
Gene position: 839754-840212 (Clockwise)
Preceding gene: 21226800
Following gene: 21226803
Centisome position: 20.5
GC content: 40.96
Gene sequence:
>459_bases ATGAAACTGGAGAATGAAGATAAACAGTCAATCTTTGAGATAGTGGCAGGCCGCTATTTCACGACACAGAACTGGAAATG GGTAAACCTGAAAAAAGACATTAACAAAATCATCAGAGCTTTTGATGAACTTAACGAACAGTACGCGTCCTATTCCTATG TCAGCAGGGACTGGTATGTGGAGAATATGGGATCCAAGAATCTCCATATGTGCAATAGCTGGGATGAGCTTAAGAATCTG GTTGCCTTCCTCAATACCTATGGGACGGCTTTTAATTTCCTTGTAAATACCGGAAACAGAAAATCTTTCTGTATAGTAAG TAACTCGAGAGACCTGGATGAAAATCAGGCGAATGCGATTAAAGAAGTCCAGAAACTGGGGTACAATACTTTCGTATTCC TGGCCACTATTCCTGATGAAATTGAATTCCAGCTGCTTCAGGTAAGGGGAGTTAACTGA
Upstream 100 bases:
>100_bases CTGGAAAAAGCCGAACTTGCTCTGCGCTTCAACCGGAGTTACGCCCAGGACGATATATTTTGAATACCGGAAAGCAGGCA AAAAAAGGAGATGTGAGAAA
Downstream 100 bases:
>100_bases GCTCTCCTTTCCGGAAAAAGGGCTGTTCTAAACTCGGAATATTTTTCTAATTCAGATTATTTTTCTAATTCAGATTATTT TTCTAATTCAGATTATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MKLENEDKQSIFEIVAGRYFTTQNWKWVNLKKDINKIIRAFDELNEQYASYSYVSRDWYVENMGSKNLHMCNSWDELKNL VAFLNTYGTAFNFLVNTGNRKSFCIVSNSRDLDENQANAIKEVQKLGYNTFVFLATIPDEIEFQLLQVRGVN
Sequences:
>Translated_152_residues MKLENEDKQSIFEIVAGRYFTTQNWKWVNLKKDINKIIRAFDELNEQYASYSYVSRDWYVENMGSKNLHMCNSWDELKNL VAFLNTYGTAFNFLVNTGNRKSFCIVSNSRDLDENQANAIKEVQKLGYNTFVFLATIPDEIEFQLLQVRGVN >Mature_152_residues MKLENEDKQSIFEIVAGRYFTTQNWKWVNLKKDINKIIRAFDELNEQYASYSYVSRDWYVENMGSKNLHMCNSWDELKNL VAFLNTYGTAFNFLVNTGNRKSFCIVSNSRDLDENQANAIKEVQKLGYNTFVFLATIPDEIEFQLLQVRGVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17832; Mature: 17832
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLENEDKQSIFEIVAGRYFTTQNWKWVNLKKDINKIIRAFDELNEQYASYSYVSRDWYV CCCCCHHHHHHHHHHHCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ENMGSKNLHMCNSWDELKNLVAFLNTYGTAFNFLVNTGNRKSFCIVSNSRDLDENQANAI ECCCCCCCEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCCHHHHHHH KEVQKLGYNTFVFLATIPDEIEFQLLQVRGVN HHHHHCCCCEEEEEEECCCCCCEEEEEEECCC >Mature Secondary Structure MKLENEDKQSIFEIVAGRYFTTQNWKWVNLKKDINKIIRAFDELNEQYASYSYVSRDWYV CCCCCHHHHHHHHHHHCCEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ENMGSKNLHMCNSWDELKNLVAFLNTYGTAFNFLVNTGNRKSFCIVSNSRDLDENQANAI ECCCCCCCEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCCHHHHHHH KEVQKLGYNTFVFLATIPDEIEFQLLQVRGVN HHHHHCCCCEEEEEEECCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA