| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226800
Identifier: 21226800
GI number: 21226800
Start: 838235
End: 839716
Strand: Direct
Name: 21226800
Synonym: MM_0698
Alternate gene names: NA
Gene position: 838235-839716 (Clockwise)
Preceding gene: 21226799
Following gene: 21226801
Centisome position: 20.46
GC content: 47.5
Gene sequence:
>1482_bases ATGGAAATTTTGATTGCAACAGGGCGGCTTGCGGAAAATACCGTGAGAAAAGCGGCTGGAGAAAAAGCAGACGTCCTTGT AGCAGATATCGACATTGCTGCCTTTATCACCCCGAAAAAACTTACCAGAGCCTTTGAGGAAGCCGGATTATCAAAAAAAT ATGACCTCATTCTGCTTCCCGGACTTGTACCGGGTGATTTTTCAAAGGTATCGGACGAGCTTGACTGTAAAATCCGGCTG GGCCCTAAACATGCTTATGACCTTGGCTTTGTGCTCCGTTTTGCAGAAGAAGTGGAGTTTTCCGTAAAGGTCCCTGCCTG TGAGCTCCTTGCAGACGTAAGAAAGGAAGAAGCTCTTGAGCTTATAAGAGAAGCCGAAGAAGAAGCCGTTTCTCCACTTA GCCTGAGAGGAGTAAAACTGGGAGGAAACTCCCGAATGAAAGTTATGGGAGAGATTGTAGGAGCAGCCGAGTTGAACCCT GCTGACCTGGAGATAAAAATCGAAGCTTTTATCGCCCGTGGAGCAGATATTATCGACCTCGGAGCTACACTTAACACCCT TCCGGGACAGGTCCGAAGTACGGTATTCCTTGCAAAATCTCTCACAGATATTCCGATAAGTATAGATACCCTTGACCCTG AGCTGATAAAGGAAGGAATAGAAGCAGGAGCAGACCTTGTTCTGAGCCTTAACAGCACAAATATGGAAACAGCAGGCTCC GTGGTTGCAAAAGCAGGTGTTGCAGCAGTCATAATTCCTGATGAAGGAAACAGTCTGGAAAGCCTTGTAAATAATATCGA ATCCGCACGCAGGCTCGGGATTGAAAGAATTATAGCCGACCCTATCCTTGACCCTGTAGGCCATAATATAACGGAATCCA TTGTTCGCTACCATGAGTTTCACAGGAGATATCCTGACATTCCATTATTCTTTGGGGCAGGCAATGTAACCGAACTCATG GACGTGGATACGATAGGAGTAAATGCCACACTCTGCGGAATAGGAGCCGAAACCGGGGCAAGTATCCTTTTTACCCCCGA GTACAGCGATAAAGCCCAGGGCTCCATAGGAGAGCTGAAAAAAGCCTCTGAGATGATGCAGCTTTGCAGGATAAGGGAAA GCTCCCCCAAGGATCTTGGCATTGACCTCCTCTTCATAAAGGAAAAACGAAAACGCCCTGACAGCCCCCTCCCCAAAAAA GTGATTACTGCCAGAGCTTCGAAAAACTGGCGTCAGGACCCTGCAGGCCCAATAAGAGTCAGGATTGTGCCGGATAAAAT TAACGGAAATGGCGGACTCATTGTAGCCGAACATGAGAAAGCAGCAATTGCAGGAGAAAGCGCCAGGGAAGTTATGGATA CATTGATTGAACTCGAACTGGTCTCGAGCCTGGATCACGCTGCATATCTTGGAAGAGAACTGGAAAAAGCCGAACTTGCT CTGCGCTTCAACCGGAGTTACGCCCAGGACGATATATTTTGA
Upstream 100 bases:
>100_bases TCCTCGGAGCGGAAAGTTAGAGTTTTCCTGACCGGGAAGCTATTTTTTGAGGCAGCTACAGATAGATACTCTTTTTTATT AGCTATTCTATCTAAAAAAC
Downstream 100 bases:
>100_bases ATACCGGAAAGCAGGCAAAAAAAGGAGATGTGAGAAAATGAAACTGGAGAATGAAGATAAACAGTCAATCTTTGAGATAG TGGCAGGCCGCTATTTCACG
Product: dihydropteroate synthase
Products: diphosphate; dihydropteroate
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MEILIATGRLAENTVRKAAGEKADVLVADIDIAAFITPKKLTRAFEEAGLSKKYDLILLPGLVPGDFSKVSDELDCKIRL GPKHAYDLGFVLRFAEEVEFSVKVPACELLADVRKEEALELIREAEEEAVSPLSLRGVKLGGNSRMKVMGEIVGAAELNP ADLEIKIEAFIARGADIIDLGATLNTLPGQVRSTVFLAKSLTDIPISIDTLDPELIKEGIEAGADLVLSLNSTNMETAGS VVAKAGVAAVIIPDEGNSLESLVNNIESARRLGIERIIADPILDPVGHNITESIVRYHEFHRRYPDIPLFFGAGNVTELM DVDTIGVNATLCGIGAETGASILFTPEYSDKAQGSIGELKKASEMMQLCRIRESSPKDLGIDLLFIKEKRKRPDSPLPKK VITARASKNWRQDPAGPIRVRIVPDKINGNGGLIVAEHEKAAIAGESAREVMDTLIELELVSSLDHAAYLGRELEKAELA LRFNRSYAQDDIF
Sequences:
>Translated_493_residues MEILIATGRLAENTVRKAAGEKADVLVADIDIAAFITPKKLTRAFEEAGLSKKYDLILLPGLVPGDFSKVSDELDCKIRL GPKHAYDLGFVLRFAEEVEFSVKVPACELLADVRKEEALELIREAEEEAVSPLSLRGVKLGGNSRMKVMGEIVGAAELNP ADLEIKIEAFIARGADIIDLGATLNTLPGQVRSTVFLAKSLTDIPISIDTLDPELIKEGIEAGADLVLSLNSTNMETAGS VVAKAGVAAVIIPDEGNSLESLVNNIESARRLGIERIIADPILDPVGHNITESIVRYHEFHRRYPDIPLFFGAGNVTELM DVDTIGVNATLCGIGAETGASILFTPEYSDKAQGSIGELKKASEMMQLCRIRESSPKDLGIDLLFIKEKRKRPDSPLPKK VITARASKNWRQDPAGPIRVRIVPDKINGNGGLIVAEHEKAAIAGESAREVMDTLIELELVSSLDHAAYLGRELEKAELA LRFNRSYAQDDIF >Mature_493_residues MEILIATGRLAENTVRKAAGEKADVLVADIDIAAFITPKKLTRAFEEAGLSKKYDLILLPGLVPGDFSKVSDELDCKIRL GPKHAYDLGFVLRFAEEVEFSVKVPACELLADVRKEEALELIREAEEEAVSPLSLRGVKLGGNSRMKVMGEIVGAAELNP ADLEIKIEAFIARGADIIDLGATLNTLPGQVRSTVFLAKSLTDIPISIDTLDPELIKEGIEAGADLVLSLNSTNMETAGS VVAKAGVAAVIIPDEGNSLESLVNNIESARRLGIERIIADPILDPVGHNITESIVRYHEFHRRYPDIPLFFGAGNVTELM DVDTIGVNATLCGIGAETGASILFTPEYSDKAQGSIGELKKASEMMQLCRIRESSPKDLGIDLLFIKEKRKRPDSPLPKK VITARASKNWRQDPAGPIRVRIVPDKINGNGGLIVAEHEKAAIAGESAREVMDTLIELELVSSLDHAAYLGRELEKAELA LRFNRSYAQDDIF
Specific function: Unknown. Does not possess dihydropteroate synthase (DHPS) activity since it does not catalyze the condensation of 6- hydroxymethyl-7,8-dihydropterin pyrophosphate (DHPP) and 4- aminobenzoate to form 7,8-dihydropteroate [H]
COG id: COG0294
COG function: function code H; Dihydropteroate synthase and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 pterin-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005236 - InterPro: IPR011005 - InterPro: IPR000489 [H]
Pfam domain/function: PF00809 Pterin_bind [H]
EC number: 2.5.1.15
Molecular weight: Translated: 53464; Mature: 53464
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS50972 PTERIN_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEILIATGRLAENTVRKAAGEKADVLVADIDIAAFITPKKLTRAFEEAGLSKKYDLILLP CEEEEECCCHHHHHHHHHCCCCCCEEEEEECEEEEECHHHHHHHHHHCCCCCCCCEEEEC GLVPGDFSKVSDELDCKIRLGPKHAYDLGFVLRFAEEVEFSVKVPACELLADVRKEEALE CCCCCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHH LIREAEEEAVSPLSLRGVKLGGNSRMKVMGEIVGAAELNPADLEIKIEAFIARGADIIDL HHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEC GATLNTLPGQVRSTVFLAKSLTDIPISIDTLDPELIKEGIEAGADLVLSLNSTNMETAGS CCCHHCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCHHHHH VVAKAGVAAVIIPDEGNSLESLVNNIESARRLGIERIIADPILDPVGHNITESIVRYHEF HHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH HRRYPDIPLFFGAGNVTELMDVDTIGVNATLCGIGAETGASILFTPEYSDKAQGSIGELK HHHCCCCEEEECCCCCHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCHHHHH KASEMMQLCRIRESSPKDLGIDLLFIKEKRKRPDSPLPKKVITARASKNWRQDPAGPIRV HHHHHHHHHHHCCCCCCCCCEEEEEEECHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEE RIVPDKINGNGGLIVAEHEKAAIAGESAREVMDTLIELELVSSLDHAAYLGRELEKAELA EEEECEECCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRFNRSYAQDDIF EEECCCCCCCCCC >Mature Secondary Structure MEILIATGRLAENTVRKAAGEKADVLVADIDIAAFITPKKLTRAFEEAGLSKKYDLILLP CEEEEECCCHHHHHHHHHCCCCCCEEEEEECEEEEECHHHHHHHHHHCCCCCCCCEEEEC GLVPGDFSKVSDELDCKIRLGPKHAYDLGFVLRFAEEVEFSVKVPACELLADVRKEEALE CCCCCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHH LIREAEEEAVSPLSLRGVKLGGNSRMKVMGEIVGAAELNPADLEIKIEAFIARGADIIDL HHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEC GATLNTLPGQVRSTVFLAKSLTDIPISIDTLDPELIKEGIEAGADLVLSLNSTNMETAGS CCCHHCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCHHHHH VVAKAGVAAVIIPDEGNSLESLVNNIESARRLGIERIIADPILDPVGHNITESIVRYHEF HHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH HRRYPDIPLFFGAGNVTELMDVDTIGVNATLCGIGAETGASILFTPEYSDKAQGSIGELK HHHCCCCEEEECCCCCHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCHHHHH KASEMMQLCRIRESSPKDLGIDLLFIKEKRKRPDSPLPKKVITARASKNWRQDPAGPIRV HHHHHHHHHHHCCCCCCCCCEEEEEEECHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEE RIVPDKINGNGGLIVAEHEKAAIAGESAREVMDTLIELELVSSLDHAAYLGRELEKAELA EEEECEECCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRFNRSYAQDDIF EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate; 4-aminobenzoate
Specific reaction: 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate + 4-aminobenzoate = diphosphate + dihydropteroate
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]